RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 PRMT2P55345 433 aa17.16■□□□□ 0.34
PRDM16-210ENST00000607632 SEPT2Q15019 361 aa17.16■□□□□ 0.34
PRDM16-210ENST00000607632 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
PRDM16-210ENST00000607632 ACER1Q8TDN7 264 aa17.16■□□□□ 0.34
PRDM16-210ENST00000607632 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
PRDM16-210ENST00000607632 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
PRDM16-210ENST00000607632 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 AKR1B1P15121 316 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 OSBPP22059 807 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 PDE4AP27815 886 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
PRDM16-210ENST00000607632 RGS19P49795 217 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 USP14P54578 494 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 KIF22Q14807 665 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 FAM110CQ1W6H9 321 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 TRIM47Q96LD4 638 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 MORF4L1Q9UBU8 362 aa17.15■□□□□ 0.34
PRDM16-210ENST00000607632 SMCR8Q8TEV9 937 aaPredicted RBP17.14■□□□□ 0.33
PRDM16-210ENST00000607632 ARMC5Q96C12 935 aa17.14■□□□□ 0.33
PRDM16-210ENST00000607632 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRDM16-210ENST00000607632 RBBP6Q7Z6E9 1792 aaKnown RBP17.14■□□□□ 0.33
PRDM16-210ENST00000607632 RLFQ13129 1914 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 A0A0D9SFI3 127 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 CCDC85CA6NKD9 419 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 RASA1P20936 1047 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 PSMC4P43686 418 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 TDO2P48775 406 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
PRDM16-210ENST00000607632 VCAM1P19320 739 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 ALX1Q15699 326 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 POTEEQ6S8J3 1075 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 LBX2Q6XYB7 198 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 CCDC129Q6ZRS4 1044 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 GTF3C2Q8WUA4 911 aaPredicted RBP17.12■□□□□ 0.33
PRDM16-210ENST00000607632 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 P2RX7Q99572 595 aaKnown RBP17.12■□□□□ 0.33
PRDM16-210ENST00000607632 FEZ1Q99689 392 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 SRRDQ9UH36 339 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 PTCH2Q9Y6C5 1203 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 ZMYM6O95789 1325 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 A0A0G2JMZ2 1700 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
PRDM16-210ENST00000607632 IGKV6D-41A0A0C4DH26 115 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L15C9J2P7 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L13C9JLJ4 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L11C9JVI0 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L18D6R9N7 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L22D6RA61 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L17D6RBQ6 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L19D6RCP7 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L20D6RJB6 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
PRDM16-210ENST00000607632 FCGRTP55899 365 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 HERVK_113P62684 666 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 IRX3P78415 501 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-210ENST00000607632 ICA1Q05084 483 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 CATSPERGQ6ZRH7 1159 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 ANKRD13CQ8N6S4 541 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 ANAPC4Q9UJX5 808 aa17.11■□□□□ 0.33
PRDM16-210ENST00000607632 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 SLC34A2O95436 690 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 APPP05067 770 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 SDSP20132 328 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 HOXD10P28358 340 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 NMIQ13287 307 aaPredicted RBP17.1■□□□□ 0.33
PRDM16-210ENST00000607632 VPS53Q5VIR6 699 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 LPAR1Q92633 364 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 NAPBQ9H115 298 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 KANSL2Q9H9L4 492 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
PRDM16-210ENST00000607632 DOCK3Q8IZD9 2030 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 PPARAQ07869 468 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 ZYXQ15942 572 aaKnown RBP17.09■□□□□ 0.33
PRDM16-210ENST00000607632 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 ZNF589Q86UQ0 364 aaPredicted RBP17.09■□□□□ 0.33
PRDM16-210ENST00000607632 CLEC10AQ8IUN9 316 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 VCPKMTQ9H867 229 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 TXNRD2Q9NNW7 524 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 RBPJLQ9UBG7 517 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRDM16-210ENST00000607632 CENPFP49454 3210 aa17.09■□□□□ 0.33
PRDM16-210ENST00000607632 CCDC171Q6TFL3 1326 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 MYPNQ86TC9 1320 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.32
PRDM16-210ENST00000607632 FGRP09769 529 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 EEF2P13639 858 aaKnown RBP17.08■□□□□ 0.32
PRDM16-210ENST00000607632 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
PRDM16-210ENST00000607632 IRF5Q13568 498 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms