RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 RNF41Q9H4P4 317 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 PLIN4Q96Q06 1357 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 A0A1W2PRG0 241 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 CXCL11O14625 94 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 DGKZQ13574 1117 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 BECN1Q14457 450 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 PTPN18Q99952 460 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 IL17RBQ9NRM6 502 aa16.42■□□□□ 0.22
CCNDBP1-206ENST00000565296 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 E7EWF7 191 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 NMT2O60551 498 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 SNAPC2Q13487 334 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 CEP95Q96GE4 821 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 TOMM22Q9NS69 142 aa16.41■□□□□ 0.22
CCNDBP1-206ENST00000565296 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 MANSC4A6NHS7 340 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 B4E1Z4 1266 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 GTF2A2P52657 109 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 MTMR2Q13614 643 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 ATAD5Q96QE3 1844 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 KDM4AO75164 1064 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 HSPA4P34932 840 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 TM4SF4P48230 202 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 BACE1P56817 501 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 ICA1Q05084 483 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 KCNB2Q92953 911 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
CCNDBP1-206ENST00000565296 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 NOVP48745 357 aa16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 CCL15Q16663 113 aa16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 ESR2Q92731 530 aa16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
CCNDBP1-206ENST00000565296 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 CETPP11597 493 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 HMGCS2P54868 508 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 SH3D19Q5HYK7 790 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 KIAA1683Q9H0B3 1180 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 GPAT2Q6NUI2 795 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 KRT23Q9C075 422 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 TCP11L1Q9NUJ3 509 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 TMX2Q9Y320 296 aa16.38■□□□□ 0.21
CCNDBP1-206ENST00000565296 INHBEP58166 350 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 SREBF2Q12772 1141 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 ZYXQ15942 572 aaKnown RBP16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 RCSD1Q6JBY9 416 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 IFNL1Q8IU54 200 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 MKL1Q969V6 931 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
CCNDBP1-206ENST00000565296 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 TTLL1O95922 423 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 NT5C2P49902 561 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 GSE1Q14687 1217 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 MB21D2Q8IYB1 491 aaPredicted RBP16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 FEZ1Q99689 392 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 ARHGEF10LQ9HCE6 1279 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 MYH8P13535 1937 aa16.36■□□□□ 0.21
CCNDBP1-206ENST00000565296 ANTXR2P58335 489 aa16.35■□□□□ 0.21
CCNDBP1-206ENST00000565296 TRDNQ13061 729 aa16.35■□□□□ 0.21
CCNDBP1-206ENST00000565296 NCOA7Q8NI08 942 aa16.35■□□□□ 0.21
CCNDBP1-206ENST00000565296 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
CCNDBP1-206ENST00000565296 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
CCNDBP1-206ENST00000565296 NFKBIBQ15653 356 aa16.35■□□□□ 0.21
CCNDBP1-206ENST00000565296 USP17L2Q6R6M4 530 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms