RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GH2P01242 217 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 PTPREP23469 700 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
ACTN1-219ENST00000556432 MCAMP43121 646 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 NOB1Q9ULX3 412 aaKnown RBP17.11■□□□□ 0.33
ACTN1-219ENST00000556432 SIPA1L1O43166 1804 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 PRUNE2Q8WUY3 3088 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 CNMDO75829 334 aa17.1■□□□□ 0.33
ACTN1-219ENST00000556432 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
ACTN1-219ENST00000556432 ARRDC4Q8NCT1 418 aa17.1■□□□□ 0.33
ACTN1-219ENST00000556432 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
ACTN1-219ENST00000556432 BADQ92934 168 aa17.1■□□□□ 0.33
ACTN1-219ENST00000556432 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
ACTN1-219ENST00000556432 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-219ENST00000556432 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
ACTN1-219ENST00000556432 RAB3GAP1Q15042 981 aa17.09■□□□□ 0.33
ACTN1-219ENST00000556432 TRIM60Q495X7 471 aa17.09■□□□□ 0.33
ACTN1-219ENST00000556432 ANO1Q5XXA6 986 aa17.09■□□□□ 0.33
ACTN1-219ENST00000556432 NPLOC4Q8TAT6 608 aa17.09■□□□□ 0.33
ACTN1-219ENST00000556432 LTBP2Q14767 1821 aa17.09■□□□□ 0.33
ACTN1-219ENST00000556432 GNAI3P08754 354 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 USP14P54578 494 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 GRB14Q14449 540 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 DPP9Q86TI2 863 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 METTL16Q86W50 562 aaKnown RBP17.08■□□□□ 0.32
ACTN1-219ENST00000556432 TRPV1Q8NER1 839 aa17.08■□□□□ 0.32
ACTN1-219ENST00000556432 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
ACTN1-219ENST00000556432 HOXC6P09630 235 aa17.07■□□□□ 0.32
ACTN1-219ENST00000556432 CYBAP13498 195 aa17.07■□□□□ 0.32
ACTN1-219ENST00000556432 VCAM1P19320 739 aa17.07■□□□□ 0.32
ACTN1-219ENST00000556432 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.322e-12■□□□□ 10.4
ACTN1-219ENST00000556432 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
ACTN1-219ENST00000556432 ADGRA1Q86SQ6 560 aa17.07■□□□□ 0.32
ACTN1-219ENST00000556432 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
ACTN1-219ENST00000556432 PPP4CP60510 307 aa17.06■□□□□ 0.32
ACTN1-219ENST00000556432 SLFN5Q08AF3 891 aa17.06■□□□□ 0.32
ACTN1-219ENST00000556432 FERMT2Q96AC1 680 aa17.06■□□□□ 0.32
ACTN1-219ENST00000556432 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
ACTN1-219ENST00000556432 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
ACTN1-219ENST00000556432 PDLIM7Q9NR12 457 aa17.06■□□□□ 0.32
ACTN1-219ENST00000556432 SPTBN5Q9NRC6 3674 aaKnown RBP17.05■□□□□ 0.32
ACTN1-219ENST00000556432 ADCYAP1R1P41586 468 aa17.05■□□□□ 0.32
ACTN1-219ENST00000556432 USP5P45974 858 aa17.05■□□□□ 0.32
ACTN1-219ENST00000556432 KIAA1683Q9H0B3 1180 aa17.05■□□□□ 0.32
ACTN1-219ENST00000556432 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-219ENST00000556432 SPDYE16A6NNV3 312 aaPredicted RBP17.04■□□□□ 0.32
ACTN1-219ENST00000556432 ADORA2AP29274 412 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 DYNLL1P63167 89 aaKnown RBP17.04■□□□□ 0.32
ACTN1-219ENST00000556432 MTX1Q13505 466 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 CCDC158Q5M9N0 1113 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 ACER1Q8TDN7 264 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 CABP5Q9NP86 173 aa17.04■□□□□ 0.32
ACTN1-219ENST00000556432 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 CDH23Q9H251 3354 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 TRIM43BA6NCK2 446 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 SEPT4O43236 478 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 CYP7A1P22680 504 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-219ENST00000556432 CERKLQ49MI3 558 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-219ENST00000556432 OLFML2BQ68BL8 750 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 TRIM43Q96BQ3 446 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-219ENST00000556432 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 RLFQ13129 1914 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
ACTN1-219ENST00000556432 COL9A1P20849 921 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 TLE2Q04725 743 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 TJAP1Q5JTD0 557 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 LBX2Q6XYB7 198 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 MOV10L1Q9BXT6 1211 aaKnown RBP17.02■□□□□ 0.32
ACTN1-219ENST00000556432 TANGO6Q9C0B7 1094 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 SLC5A4Q9NY91 659 aa17.02■□□□□ 0.32
ACTN1-219ENST00000556432 TMEM265A0A087WTH1 108 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
ACTN1-219ENST00000556432 CYP2E1P05181 493 aaPredicted RBP17.01■□□□□ 0.31
ACTN1-219ENST00000556432 PLS1Q14651 629 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 SNX17Q15036 470 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 LRRC41Q15345 812 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 PRAMEF19Q5SWL8 479 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 TATDN1Q6P1N9 297 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
ACTN1-219ENST00000556432 PIH1D3Q9NQM4 214 aaKnown RBP17.01■□□□□ 0.31
ACTN1-219ENST00000556432 STRNO43815 780 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 GNAI2P04899 355 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 RAG1P15918 1043 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 ERCC3P19447 782 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 ZAP70P43403 619 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
ACTN1-219ENST00000556432 SPATC1LQ9H0A9 340 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms