RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 RNF34Q969K3 372 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 EVI5LQ96CN4 794 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 SGSM3Q96HU1 749 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 LPIN3Q9BQK8 851 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 PLVAPQ9BX97 442 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 PCDH12Q9NPG4 1184 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 SMG6Q86US8 1419 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 TONSLQ96HA7 1378 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 USP47Q96K76 1375 aa7.07□□□□□ -1.28
SMARCC2-207ENST00000549757 TUBGCP6Q96RT7 1819 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 DNAJA1P31689 397 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 SOX18P35713 384 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 TNNI2P48788 182 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 GNL2Q13823 731 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 GRIK5Q16478 980 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 PCSK7Q16549 785 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 RPUSD2Q8IZ73 545 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 NLGN2Q8NFZ4 835 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
SMARCC2-207ENST00000549757 A0A0U1RQG5 324 aaPredicted RBP7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 CREB3O43889 395 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 GRIN3BO60391 1043 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 LILRB5O75023 590 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 PPFIA4O75335 1185 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 CPB1P15086 417 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 HOXC9P31274 260 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 EIF1AXP47813 144 aaKnown RBP7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 AFF1P51825 1210 aaKnown RBP7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 MLLT1Q03111 559 aaPredicted RBP7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 PLAURQ03405 335 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 RAPGEF4Q8WZA2 1011 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 GABBR1Q9UBS5 961 aa7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
SMARCC2-207ENST00000549757 LY75O60449 1722 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 MAP3K19Q56UN5 1328 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 PSAPP07602 524 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 BMS1Q14692 1282 aaKnown RBP7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 USHBP1Q8N6Y0 703 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 OR13H1Q8NG92 308 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 TTC9Q92623 222 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 IFT57Q9NWB7 429 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 MEGF6O75095 1541 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 RGPD2P0DJD1 1756 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 RTL1A6NKG5 1358 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 NSD2O96028 1365 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 SHANK3Q9BYB0 1731 aa7.04□□□□□ -1.28
SMARCC2-207ENST00000549757 C5P01031 1676 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 LOC102724428A0A0B4J2F2 783 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 HMGB1P1B2RPK0 211 aaPredicted RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 PROCP04070 461 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 PDGFAP04085 211 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 FBLN1P23142 703 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 HMGB2P26583 209 aaKnown RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 SIK1P57059 783 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 ARID5AQ03989 594 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 FMR1Q06787 632 aaKnown RBP eCLIP7.03□□□□□ -1.281e-8■■□□□ 12.6
SMARCC2-207ENST00000549757 RRS1Q15050 365 aaKnown RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 HFE2Q6ZVN8 426 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 COL23A1Q86Y22 540 aaPredicted RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 NME8Q8N427 588 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 EDEM1Q92611 657 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 FAM161BQ96MY7 647 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 FNDC3AQ9Y2H6 1198 aaKnown RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 LAS1LQ9Y4W2 734 aaKnown RBP7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 COL24A1Q17RW2 1714 aa7.03□□□□□ -1.28
SMARCC2-207ENST00000549757 PCDH11XQ9BZA7 1347 aa7.02□□□□□ -1.28
SMARCC2-207ENST00000549757 PCDH11YQ9BZA8 1340 aa7.02□□□□□ -1.28
SMARCC2-207ENST00000549757 ST20-MTHFSA0A0A6YYL1 179 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 ENPP3O14638 875 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 RGS9O75916 674 aaPredicted RBP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 IGHA1P01876 353 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 SPATA31C1P0DKV0 1188 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 YBX3P16989 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 MZF1P28698 734 aaPredicted RBP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 ZNF76P36508 570 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 FKBP4Q02790 459 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 PDE12Q6L8Q7 609 aaKnown RBP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 MPRIPQ6WCQ1 1025 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 TMC4Q7Z404 712 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 FILIP1Q7Z7B0 1213 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 CCDC146Q8IYE0 955 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 STAG1Q8WVM7 1258 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 NSUN5Q96P11 429 aaKnown RBP7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 PLCD4Q9BRC7 762 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 GGNBP2Q9H3C7 697 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 PARP2Q9UGN5 583 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 PALLDQ8WX93 1383 aa7.02□□□□□ -1.29
SMARCC2-207ENST00000549757 CGNL1Q0VF96 1302 aa7.01□□□□□ -1.29
SMARCC2-207ENST00000549757 ATP10DQ9P241 1426 aa7.01□□□□□ -1.29
SMARCC2-207ENST00000549757 SPDYE3A6NKU9 549 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms