RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CDK8P49336 464 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 USP14P54578 494 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 CHD1LQ86WJ1 897 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 CCDC17Q96LX7 622 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 LNPKQ9C0E8 428 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 OSBPL3Q9H4L5 887 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 SRRDQ9UH36 339 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 GREB1LQ9C091 1923 aaPredicted RBP20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 ROBO3Q96MS0 1386 aa20.62■□□□□ 0.89
SFSWAP-205ENST00000537164 SMIM22K7EJ46 135 aa20.62■□□□□ 0.89
SFSWAP-205ENST00000537164 HOXD10P28358 340 aa20.62■□□□□ 0.89
SFSWAP-205ENST00000537164 SEPT2Q15019 361 aa20.62■□□□□ 0.89
SFSWAP-205ENST00000537164 TMEM179Q6ZVK1 233 aa20.62■□□□□ 0.89
SFSWAP-205ENST00000537164 PTCH2Q9Y6C5 1203 aa20.62■□□□□ 0.89
SFSWAP-205ENST00000537164 PATL2C9JE40 543 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 FCGRTP55899 365 aa20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 ACER1Q8TDN7 264 aa20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 SEC62Q99442 399 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 EPB41L4AQ9HCS5 686 aaPredicted RBP20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 MORF4L1Q9UBU8 362 aa20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 DOCK3Q8IZD9 2030 aa20.61■□□□□ 0.89
SFSWAP-205ENST00000537164 FMNL1O95466 1100 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-205ENST00000537164 B4GALNT3Q6L9W6 998 aa20.6■□□□□ 0.89
SFSWAP-205ENST00000537164 ANKRD13CQ8N6S4 541 aa20.6■□□□□ 0.89
SFSWAP-205ENST00000537164 AKR1B1P15121 316 aa20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 HERVK_113P62684 666 aa20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 IRX3P78415 501 aaPredicted RBP20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 SIAH1Q8IUQ4 282 aa20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 PLEKHM2Q8IWE5 1019 aa20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 ZNF333Q96JL9 665 aa20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 P2RX7Q99572 595 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 FEZ1Q99689 392 aa20.59■□□□□ 0.89
SFSWAP-205ENST00000537164 KIAA0100Q14667 2235 aaKnown RBP20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 A0A1W2PRG0 241 aa20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 MPHOSPH10O00566 681 aaKnown RBP20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 VCAM1P19320 739 aa20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 SOX10P56693 466 aa20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 SLC9C1Q4G0N8 1177 aa20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 NBPF11Q86T75 865 aa20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 GTF3C2Q8WUA4 911 aaPredicted RBP20.58■□□□□ 0.89
SFSWAP-205ENST00000537164 MKI67P46013 3256 aaKnown RBP20.58■□□□□ 0.88
SFSWAP-205ENST00000537164 MYPNQ86TC9 1320 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 RLFQ13129 1914 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L15C9J2P7 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L13C9JLJ4 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L11C9JVI0 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L18D6R9N7 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L22D6RA61 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L17D6RBQ6 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L19D6RCP7 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L20D6RJB6 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 USP17L24Q0WX57 530 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 LBX2Q6XYB7 198 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 CATSPERGQ6ZRH7 1159 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 HELLSQ9NRZ9 838 aa20.57■□□□□ 0.88
SFSWAP-205ENST00000537164 FOXP2O15409 715 aa20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 MLLT1Q03111 559 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 PRKCZQ05513 592 aa20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 ZYXQ15942 572 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 POTEEQ6S8J3 1075 aa20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 RBPJLQ9UBG7 517 aa20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 TMX2Q9Y320 296 aa20.56■□□□□ 0.88
SFSWAP-205ENST00000537164 PLXNB2O15031 1838 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 PARP14Q460N5 1801 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 TNPO2O14787 897 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 APPP05067 770 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 RASA1P20936 1047 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 TDO2P48775 406 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 ICA1Q05084 483 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 IRF5Q13568 498 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 KANSL2Q9H9L4 492 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 ARHGEF10LQ9HCE6 1279 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 TXNRD2Q9NNW7 524 aa20.55■□□□□ 0.88
SFSWAP-205ENST00000537164 MINDY4BA8MYZ0 360 aa20.54■□□□□ 0.88
SFSWAP-205ENST00000537164 RAET1EQ8TD07 263 aa20.54■□□□□ 0.88
SFSWAP-205ENST00000537164 LPAR1Q92633 364 aa20.54■□□□□ 0.88
SFSWAP-205ENST00000537164 ZNF287Q9HBT7 754 aa20.54■□□□□ 0.88
SFSWAP-205ENST00000537164 GABRQQ9UN88 632 aa20.54■□□□□ 0.88
SFSWAP-205ENST00000537164 A0A0G2JMZ2 1700 aa20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 ECM2O94769 699 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 GRK4P32298 578 aa20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 GPRC5AQ8NFJ5 357 aa20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 COA7Q96BR5 231 aa20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 RPAP3Q9H6T3 665 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 RABGAP1Q9Y3P9 1069 aa20.53■□□□□ 0.88
SFSWAP-205ENST00000537164 FLT3LGP49771 235 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 ERVK-9P63128 1117 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 ERVK-24P63145 666 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 ALX1Q15699 326 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 MCMDC2Q4G0Z9 681 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 KIAA1755Q5JYT7 1200 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 CCDC129Q6ZRS4 1044 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 CLEC10AQ8IUN9 316 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 SLAIN1Q8ND83 568 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms