RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-223ENST00000533079 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 CERS3Q8IU89 383 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 CDX2Q99626 313 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-223ENST00000533079 EMILIN3Q9NT22 766 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 AATFQ9NY61 560 aaKnown RBP eCLIP15.27■□□□□ 0.04
CAPN1-223ENST00000533079 RLFQ13129 1914 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 GDF11O95390 407 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 GNAI3P08754 354 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 ATP2B2Q01814 1243 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 ARRDC4Q8NCT1 418 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 MEIS3Q99687 375 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 FLRT1Q9NZU1 646 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 A0A0G2JMZ2 1700 aa15.26■□□□□ 0.03
CAPN1-223ENST00000533079 KBTBD13C9JR72 458 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 CNMDO75829 334 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 CYBAP13498 195 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 CNGA1P29973 690 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 ATN1P54259 1190 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-223ENST00000533079 JAG1P78504 1218 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 SNX17Q15036 470 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 POTEEQ6S8J3 1075 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 TGFBRAP1Q8WUH2 860 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 FEZ1Q99689 392 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 KIAA1683Q9H0B3 1180 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
CAPN1-223ENST00000533079 IGHA2P01877 340 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 WDR78Q5VTH9 848 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 C1orf53Q5VUE5 145 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 OLFML2BQ68BL8 750 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 CATSPERGQ6ZRH7 1159 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 PALD1Q9ULE6 856 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 ATP11BQ9Y2G3 1177 aa15.24■□□□□ 0.03
CAPN1-223ENST00000533079 GH2P01242 217 aa15.23■□□□□ 0.03
CAPN1-223ENST00000533079 FOSL2P15408 326 aa15.23■□□□□ 0.03
CAPN1-223ENST00000533079 VCAM1P19320 739 aa15.23■□□□□ 0.03
CAPN1-223ENST00000533079 SHHQ15465 462 aa15.23■□□□□ 0.03
CAPN1-223ENST00000533079 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
CAPN1-223ENST00000533079 EHD4Q9H223 541 aa15.23■□□□□ 0.03
CAPN1-223ENST00000533079 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
CAPN1-223ENST00000533079 STRNO43815 780 aa15.22■□□□□ 0.03
CAPN1-223ENST00000533079 CYP2C19P33261 490 aa15.22■□□□□ 0.03
CAPN1-223ENST00000533079 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-223ENST00000533079 SLC39A5Q6ZMH5 540 aa15.22■□□□□ 0.03
CAPN1-223ENST00000533079 GPR108Q9NPR9 543 aa15.22■□□□□ 0.03
CAPN1-223ENST00000533079 PRDM5Q9NQX1 630 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-223ENST00000533079 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-223ENST00000533079 SEPT4O43236 478 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 CCDC158Q5M9N0 1113 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-223ENST00000533079 ADGRA1Q86SQ6 560 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 NPLOC4Q8TAT6 608 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 MYLIPQ8WY64 445 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-223ENST00000533079 TTYH1Q9H313 450 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-223ENST00000533079 PDLIM7Q9NR12 457 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 SERPINB13Q9UIV8 391 aa15.21■□□□□ 0.03
CAPN1-223ENST00000533079 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-223ENST00000533079 G3BP1Q13283 466 aaKnown RBP eCLIP15.2■□□□□ 0.02
CAPN1-223ENST00000533079 ZYXQ15942 572 aaKnown RBP15.2■□□□□ 0.02
CAPN1-223ENST00000533079 TRIM60Q495X7 471 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 GJC2Q5T442 439 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-223ENST00000533079 DPP9Q86TI2 863 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 SHCBP1Q8NEM2 672 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 TRPV1Q8NER1 839 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 BADQ92934 168 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 BTBD7Q9P203 1132 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 ROBO3Q96MS0 1386 aa15.2■□□□□ 0.02
CAPN1-223ENST00000533079 MYH1P12882 1939 aa15.19■□□□□ 0.02
CAPN1-223ENST00000533079 ADORA2AP29274 412 aa15.19■□□□□ 0.02
CAPN1-223ENST00000533079 RAB3GAP1Q15042 981 aa15.19■□□□□ 0.02
CAPN1-223ENST00000533079 TJAP1Q5JTD0 557 aa15.19■□□□□ 0.02
CAPN1-223ENST00000533079 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
CAPN1-223ENST00000533079 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
CAPN1-223ENST00000533079 NDUFB9Q9Y6M9 179 aa15.19■□□□□ 0.02
CAPN1-223ENST00000533079 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-223ENST00000533079 ABCB5Q2M3G0 1257 aa15.18■□□□□ 0.02
CAPN1-223ENST00000533079 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-223ENST00000533079 TTC6Q86TZ1 520 aa15.18■□□□□ 0.02
CAPN1-223ENST00000533079 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
CAPN1-223ENST00000533079 MB21D1Q8N884 522 aa15.18■□□□□ 0.02
CAPN1-223ENST00000533079 RNPC3Q96LT9 517 aaKnown RBP15.18■□□□□ 0.02
CAPN1-223ENST00000533079 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-223ENST00000533079 CABP5Q9NP86 173 aa15.18■□□□□ 0.02
CAPN1-223ENST00000533079 NRBP1Q9UHY1 535 aa15.18■□□□□ 0.02
CAPN1-223ENST00000533079 TACC3Q9Y6A5 838 aa15.18■□□□□ 0.02
CAPN1-223ENST00000533079 GNAI2P04899 355 aa15.17■□□□□ 0.02
CAPN1-223ENST00000533079 USP5P45974 858 aa15.17■□□□□ 0.02
CAPN1-223ENST00000533079 TNNI3KQ59H18 835 aa15.17■□□□□ 0.02
CAPN1-223ENST00000533079 SPATC1LQ9H0A9 340 aa15.17■□□□□ 0.02
CAPN1-223ENST00000533079 HOXC10Q9NYD6 342 aa15.17■□□□□ 0.02
CAPN1-223ENST00000533079 FPGT-TNNI3KV9GXZ4 949 aa15.17■□□□□ 0.02
CAPN1-223ENST00000533079 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms