RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 LRFN4Q6PJG9 635 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 LCNL1Q6ZST4 164 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 COX4I2Q96KJ9 171 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 DIRC2Q96SL1 478 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 NSUN3Q9H649 340 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 FBRSQ9HAH7 460 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 ST14Q9Y5Y6 855 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 FYCO1Q9BQS8 1478 aa6.53□□□□□ -1.36
UBE2D3-230ENST00000510599 RRBP1Q9P2E9 1410 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 CELA3AP09093 270 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 C1QTNF9P0C862 333 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 CYP7A1P22680 504 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 ETF1P62495 437 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 INPP5AQ14642 412 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 ALG1LQ6GMV1 187 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 TDRD9Q8NDG6 1382 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 GRIN2BQ13224 1484 aa6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 EIF4G3O43432 1585 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-230ENST00000510599 KIR3DL1P43629 444 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 RANGAP1P46060 587 aaPredicted RBP6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 ATP2B2Q01814 1243 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 HID1Q8IV36 788 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 OSBPL7Q9BZF2 842 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 FAM8A1Q9UBU6 413 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 SPG7Q9UQ90 795 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 GNEQ9Y223 722 aaKnown RBP6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 SNCAIPQ9Y6H5 919 aa6.51□□□□□ -1.37
UBE2D3-230ENST00000510599 FMN1Q68DA7 1419 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 CASKIN1Q8WXD9 1431 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 IQGAP2Q13576 1575 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 LRRC9Q6ZRR7 1453 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 CBX7O95931 251 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 KRT1P04264 644 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 TMEM253P0C7T8 217 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 NKG7Q16617 165 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 LILRA6Q6PI73 481 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 C14orf37Q86TY3 774 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 ZSCAN29Q8IWY8 852 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 ABHD4Q8TB40 342 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 UBE2FQ969M7 185 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 GAL3ST3Q96A11 431 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 DCP1AQ9NPI6 582 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 SLAMF8Q9P0V8 285 aa6.5□□□□□ -1.37
UBE2D3-230ENST00000510599 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
UBE2D3-230ENST00000510599 TTC6Q86TZ1 520 aa6.49□□□□□ -1.37
UBE2D3-230ENST00000510599 C12orf49Q9H741 205 aa6.49□□□□□ -1.37
UBE2D3-230ENST00000510599 RAPGEFL1Q9UHV5 662 aa6.49□□□□□ -1.37
UBE2D3-230ENST00000510599 CNTNAP4Q9C0A0 1308 aa6.49□□□□□ -1.37
UBE2D3-230ENST00000510599 SNAPC4Q5SXM2 1469 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 TCAF2A6NFQ2 919 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 NPIPB6E9PJ23 425 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 CST3P01034 146 aaPredicted RBP6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 USP17L7P0C7H9 530 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 PRAMEF13Q5VWM6 474 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 SV2BQ7L1I2 683 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 TMPRSS7Q7RTY8 843 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 RIN3Q8TB24 985 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 ZSWIM5Q9P217 1185 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 TMEM59LQ9UK28 342 aa6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 TTF2Q9UNY4 1162 aaKnown RBP6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 TTBK1Q5TCY1 1321 aaPredicted RBP6.48□□□□□ -1.37
UBE2D3-230ENST00000510599 SUPT6HQ7KZ85 1726 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 ERCC6Q03468 1493 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 UGGT2Q9NYU1 1516 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 LMNB1P20700 586 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 TNK2Q07912 1038 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 KCNA10Q16322 511 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 PIWIL2Q8TC59 973 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 XAGE3Q8WTP9 111 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 KRTAP4-11Q9BYQ6 195 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 CD320Q9NPF0 282 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 MAGI1Q96QZ7 1491 aaPredicted RBP6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 HECW1Q76N89 1606 aa6.47□□□□□ -1.37
UBE2D3-230ENST00000510599 MED14OSP0DP75 135 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 GLDCP23378 1020 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 GRK4P32298 578 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 ETV3P41162 512 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 FHOD3Q2V2M9 1422 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 TTBK2Q6IQ55 1244 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 ATG14Q6ZNE5 492 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 TTLL10Q6ZVT0 673 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 SLC26A8Q96RN1 970 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 SETDB2Q96T68 719 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 ARID3AQ99856 593 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 NCANO14594 1321 aa6.46□□□□□ -1.38
UBE2D3-230ENST00000510599 ZNF608Q9ULD9 1512 aaPredicted RBP6.45□□□□□ -1.38
UBE2D3-230ENST00000510599 CCNB3Q8WWL7 1395 aa6.45□□□□□ -1.38
UBE2D3-230ENST00000510599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.45□□□□□ -1.38
UBE2D3-230ENST00000510599 DNAJC25-GNG10A0A024R161 153 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms