RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LBHD1Q9BQE6 289 aaPredicted RBP21.63■■□□□ 1.05
NUP50-218ENST00000493456 FPGT-TNNI3KV9GXZ4 949 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 IPO8O15397 1037 aaKnown RBP21.62■■□□□ 1.05
NUP50-218ENST00000493456 GH2P01242 217 aa21.62■■□□□ 1.05
NUP50-218ENST00000493456 SAP30BPQ9UHR5 308 aaKnown RBP21.62■■□□□ 1.05
NUP50-218ENST00000493456 SLC15A5A6NIM6 579 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 POTEB2H3BUK9 544 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 CNMDO75829 334 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 HOXC6P09630 235 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 TATDN1Q6P1N9 297 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 LBX2Q6XYB7 198 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 LPAR1Q92633 364 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 DBNDD2Q9BQY9 259 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 SENP6Q9GZR1 1112 aaPredicted RBP21.61■■□□□ 1.05
NUP50-218ENST00000493456 DDX20Q9UHI6 824 aaKnown RBP21.61■■□□□ 1.05
NUP50-218ENST00000493456 IVNS1ABPQ9Y6Y0 642 aa21.61■■□□□ 1.05
NUP50-218ENST00000493456 SPTBN5Q9NRC6 3674 aaKnown RBP21.6■■□□□ 1.05
NUP50-218ENST00000493456 TRIM27P14373 513 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 PTPREP23469 700 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 WDR78Q5VTH9 848 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 CATSPERGQ6ZRH7 1159 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 KIAA1683Q9H0B3 1180 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 EHD4Q9H223 541 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 PRUNE2Q8WUY3 3088 aa21.6■■□□□ 1.05
NUP50-218ENST00000493456 DNM1LO00429 736 aa21.59■■□□□ 1.05
NUP50-218ENST00000493456 GRB14Q14449 540 aa21.59■■□□□ 1.05
NUP50-218ENST00000493456 ZYXQ15942 572 aaKnown RBP21.59■■□□□ 1.05
NUP50-218ENST00000493456 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.59■■□□□ 1.05
NUP50-218ENST00000493456 CDH23Q9H251 3354 aa21.59■■□□□ 1.05
NUP50-218ENST00000493456 FLRT1Q9NZU1 646 aa21.59■■□□□ 1.05
NUP50-218ENST00000493456 PRKAG2Q9UGJ0 569 aa21.59■■□□□ 1.05
NUP50-218ENST00000493456 SERPINB13Q9UIV8 391 aa21.59■■□□□ 1.05
NUP50-218ENST00000493456 VCAM1P19320 739 aa21.58■■□□□ 1.05
NUP50-218ENST00000493456 CYP7A1P22680 504 aa21.58■■□□□ 1.05
NUP50-218ENST00000493456 ZAP70P43403 619 aa21.58■■□□□ 1.05
NUP50-218ENST00000493456 USP5P45974 858 aa21.58■■□□□ 1.05
NUP50-218ENST00000493456 DYNLL1P63167 89 aaKnown RBP21.58■■□□□ 1.05
NUP50-218ENST00000493456 ATP2B2Q01814 1243 aa21.58■■□□□ 1.05
NUP50-218ENST00000493456 OS9Q13438 667 aaPredicted RBP21.58■■□□□ 1.05
NUP50-218ENST00000493456 GUCD1Q96NT3 240 aa21.58■■□□□ 1.05
NUP50-218ENST00000493456 COL25A1Q9BXS0 654 aaPredicted RBP21.58■■□□□ 1.05
NUP50-218ENST00000493456 PIH1D3Q9NQM4 214 aaKnown RBP21.58■■□□□ 1.05
NUP50-218ENST00000493456 CNGA1P29973 690 aa21.57■■□□□ 1.04
NUP50-218ENST00000493456 POLA2Q14181 598 aa21.57■■□□□ 1.04
NUP50-218ENST00000493456 RAB3GAP1Q15042 981 aa21.57■■□□□ 1.04
NUP50-218ENST00000493456 TMED8Q6PL24 325 aaPredicted RBP21.57■■□□□ 1.04
NUP50-218ENST00000493456 MYH1P12882 1939 aa21.57■■□□□ 1.04
NUP50-218ENST00000493456 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
NUP50-218ENST00000493456 ABCB5Q2M3G0 1257 aa21.56■■□□□ 1.04
NUP50-218ENST00000493456 CERKLQ49MI3 558 aaPredicted RBP21.56■■□□□ 1.04
NUP50-218ENST00000493456 ZNF697Q5TEC3 545 aa21.56■■□□□ 1.04
NUP50-218ENST00000493456 NDUFB9Q9Y6M9 179 aa21.56■■□□□ 1.04
NUP50-218ENST00000493456 ZNF236Q9UL36 1845 aa21.55■■□□□ 1.04
NUP50-218ENST00000493456 SPDYE16A6NNV3 312 aaPredicted RBP21.55■■□□□ 1.04
NUP50-218ENST00000493456 ATN1P54259 1190 aaPredicted RBP21.55■■□□□ 1.04
NUP50-218ENST00000493456 TTC6Q86TZ1 520 aa21.55■■□□□ 1.04
NUP50-218ENST00000493456 SSH3Q8TE77 659 aa21.55■■□□□ 1.04
NUP50-218ENST00000493456 CABP5Q9NP86 173 aa21.55■■□□□ 1.04
NUP50-218ENST00000493456 BTBD7Q9P203 1132 aa21.55■■□□□ 1.04
NUP50-218ENST00000493456 LTBP2Q14767 1821 aa21.55■■□□□ 1.04
NUP50-218ENST00000493456 IDH1O75874 414 aaKnown RBP21.54■■□□□ 1.04
NUP50-218ENST00000493456 IGHA2P01877 340 aa21.54■■□□□ 1.04
NUP50-218ENST00000493456 CYBAP13498 195 aa21.54■■□□□ 1.04
NUP50-218ENST00000493456 CYP2C19P33261 490 aa21.54■■□□□ 1.04
NUP50-218ENST00000493456 RTP1P59025 263 aa21.54■■□□□ 1.04
NUP50-218ENST00000493456 MIGA1Q8NAN2 632 aa21.54■■□□□ 1.04
NUP50-218ENST00000493456 NPLOC4Q8TAT6 608 aa21.54■■□□□ 1.04
NUP50-218ENST00000493456 RPAP3Q9H6T3 665 aaPredicted RBP21.54■■□□□ 1.04
NUP50-218ENST00000493456 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
NUP50-218ENST00000493456 SURF6O75683 361 aaKnown RBP21.53■■□□□ 1.04
NUP50-218ENST00000493456 OLFML2BQ68BL8 750 aa21.53■■□□□ 1.04
NUP50-218ENST00000493456 ARRDC4Q8NCT1 418 aa21.53■■□□□ 1.04
NUP50-218ENST00000493456 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
NUP50-218ENST00000493456 FRAT1Q92837 279 aaPredicted RBP21.53■■□□□ 1.04
NUP50-218ENST00000493456 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
NUP50-218ENST00000493456 STRNO43815 780 aa21.52■■□□□ 1.04
NUP50-218ENST00000493456 DPP9Q86TI2 863 aa21.52■■□□□ 1.04
NUP50-218ENST00000493456 MAGEB6Q8N7X4 407 aa21.52■■□□□ 1.04
NUP50-218ENST00000493456 TRPV1Q8NER1 839 aa21.52■■□□□ 1.04
NUP50-218ENST00000493456 FAM161BQ96MY7 647 aa21.52■■□□□ 1.04
NUP50-218ENST00000493456 TNNQ9UQP3 1299 aa21.52■■□□□ 1.04
NUP50-218ENST00000493456 KBTBD13C9JR72 458 aa21.51■■□□□ 1.03
NUP50-218ENST00000493456 SHMT1P34896 483 aa21.51■■□□□ 1.03
NUP50-218ENST00000493456 ATP8B2P98198 1209 aa21.51■■□□□ 1.03
NUP50-218ENST00000493456 MAP3K12Q12852 859 aa21.51■■□□□ 1.03
NUP50-218ENST00000493456 ATP11BQ9Y2G3 1177 aa21.51■■□□□ 1.03
NUP50-218ENST00000493456 NOP58Q9Y2X3 529 aaKnown RBP21.51■■□□□ 1.03
NUP50-218ENST00000493456 ADORA2AP29274 412 aa21.5■■□□□ 1.03
NUP50-218ENST00000493456 SHCBP1Q8NEM2 672 aa21.5■■□□□ 1.03
NUP50-218ENST00000493456 HOXC10Q9NYD6 342 aa21.5■■□□□ 1.03
NUP50-218ENST00000493456 TLR7Q9NYK1 1049 aaKnown RBP21.5■■□□□ 1.03
NUP50-218ENST00000493456 RLFQ13129 1914 aa21.5■■□□□ 1.03
NUP50-218ENST00000493456 SEPT4O43236 478 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 BCAR3O75815 825 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 GUCY1A2P33402 732 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 SNX17Q15036 470 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 GJC2Q5T442 439 aaPredicted RBP21.49■■□□□ 1.03
NUP50-218ENST00000493456 SLC39A5Q6ZMH5 540 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 TMEM57Q8N5G2 664 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 MOV10L1Q9BXT6 1211 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms