RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CTAGE5O15320 804 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 GADD45BO75293 160 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-207ENST00000489357 ATP2B4P23634 1241 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 CHRNDQ07001 517 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 STK3Q13188 491 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 LRCH3Q96II8 777 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 NMRK2Q9NPI5 230 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 DENND2AQ9ULE3 1009 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 LEMD3Q9Y2U8 911 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 SCN4AP35499 1836 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 STK36Q9NRP7 1315 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 ESPNB1AK53 854 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 CTDNEP1O95476 244 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 CHGBP05060 677 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 CCDC192P0DO97 292 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 SART3Q15020 963 aaKnown RBP9.85□□□□□ -0.83
VTI1A-207ENST00000489357 TTLL5Q6EMB2 1281 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 PI16Q6UXB8 463 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 RBM43Q6ZSC3 357 aaKnown RBP9.85□□□□□ -0.83
VTI1A-207ENST00000489357 TTC6Q86TZ1 520 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 SLF2Q8IX21 1173 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 LEO1Q8WVC0 666 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-207ENST00000489357 STAG1Q8WVM7 1258 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 NAPBQ9H115 298 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-207ENST00000489357 GDPD2Q9HCC8 539 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 ANAPC4Q9UJX5 808 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 RCOR1Q9UKL0 485 aa9.85□□□□□ -0.83
VTI1A-207ENST00000489357 KLF18A0A0U1RQI7 1052 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 YDJCA8MPS7 323 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 GOLGA8BA8MQT2 603 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 SH2B2O14492 632 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-207ENST00000489357 CPLX1O14810 134 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 JAK2O60674 1132 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-207ENST00000489357 AOC3Q16853 763 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 TXNRD3Q86VQ6 643 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 ZSCAN30Q86W11 494 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 CERS3Q8IU89 383 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 SPNS2Q8IVW8 549 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 IFNL3Q8IZI9 196 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 WASF1Q92558 559 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 FUCA2Q9BTY2 467 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 NUP62CLQ9H1M0 184 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 KDM4CQ9H3R0 1056 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-207ENST00000489357 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-207ENST00000489357 GGA1Q9UJY5 639 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 ZNRF3Q9ULT6 936 aa9.84□□□□□ -0.83
VTI1A-207ENST00000489357 MYO5AQ9Y4I1 1855 aaKnown RBP9.83□□□□□ -0.84
VTI1A-207ENST00000489357 CCDC196A0A1B0GTZ2 297 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 SOWAHBA6NEL2 793 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 SNAP23O00161 211 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 PPIP5K2O43314 1243 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 RNF40O75150 1001 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 YEATS4O95619 227 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 APPP05067 770 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-207ENST00000489357 ANTXR2P58335 489 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 CXCL9Q07325 125 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 MAP3K11Q16584 847 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 AKNAD1Q5T1N1 836 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 MAGEB6Q8N7X4 407 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 FBXO18Q8NFZ0 1043 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 CHAMP1Q96JM3 812 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 EYA3Q99504 573 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 RRAGCQ9HB90 399 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 ANKIB1Q9P2G1 1089 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 LRP2BPQ9P2M1 347 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 CCDC39Q9UFE4 941 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
VTI1A-207ENST00000489357 ZNF541Q9H0D2 1346 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 MYH13Q9UKX3 1938 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 A0A1W2PQ27 194 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 A0A1W2PQ64 194 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 A0A1W2PQD8 194 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 ERICH2A1L162 156 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 GSG1L2A8MUP6 293 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 UFL1O94874 794 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 MBD4O95243 580 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 TPM3P06753 285 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
VTI1A-207ENST00000489357 SLFNL1Q499Z3 407 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 APOA5Q6Q788 366 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 SYNE3Q6ZMZ3 975 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 MFSD6Q6ZSS7 791 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-207ENST00000489357 KCNG4Q8TDN1 519 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 IGDCC4Q8TDY8 1250 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 JDP2Q8WYK2 163 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
VTI1A-207ENST00000489357 C8orf76Q96K31 380 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 GPR101Q96P66 508 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms