RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 SMAD7O15105 426 aaKnown RBP7.77□□□□□ -1.17
UPF3A-205ENST00000479712 ZNF862O60290 1169 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 CTSBP07858 339 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 CELA2BP08218 269 aaPredicted RBP7.77□□□□□ -1.17
UPF3A-205ENST00000479712 SELPP16109 830 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 SERINC3Q13530 473 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 RAB33AQ14088 237 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 NFE2L2Q16236 605 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 HP1BP3Q5SSJ5 553 aaPredicted RBP7.77□□□□□ -1.17
UPF3A-205ENST00000479712 HDXQ7Z353 690 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 TMEM151AQ8N4L1 468 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 EHMT1Q9H9B1 1298 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 TMA7Q9Y2S6 64 aaKnown RBP7.77□□□□□ -1.17
UPF3A-205ENST00000479712 KDM5AP29375 1690 aaKnown RBP7.76□□□□□ -1.17
UPF3A-205ENST00000479712 LOC100289279A0A1B0GTE1 492 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 TM4SF5O14894 197 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 LIG1P18858 919 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 CANXP27824 592 aaKnown RBP7.76□□□□□ -1.17
UPF3A-205ENST00000479712 COL9A3Q14050 684 aaPredicted RBP7.76□□□□□ -1.17
UPF3A-205ENST00000479712 INPP5AQ14642 412 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 LYPD4Q6UWN0 246 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 LSRQ86X29 649 aaPredicted RBP7.76□□□□□ -1.17
UPF3A-205ENST00000479712 FAM9AQ8IZU1 332 aaPredicted RBP7.76□□□□□ -1.17
UPF3A-205ENST00000479712 FAM169BQ8N8A8 192 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 ELMO3Q96BJ8 720 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 MRFAP1L1Q96HT8 127 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 SIRPGQ9P1W8 387 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 SNCAIPQ9Y6H5 919 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 ARHGAP5Q13017 1502 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 MAST1Q9Y2H9 1570 aa7.76□□□□□ -1.17
UPF3A-205ENST00000479712 PRDM15P57071 1507 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 GFRA2O00451 464 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 DDX3YO15523 660 aaKnown RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 ADAM11O75078 769 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 ATE1O95260 518 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 GDF11O95390 407 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 DGKGP49619 791 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 RASSF7Q02833 373 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 KIF4BQ2VIQ3 1234 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 FOXD4L6Q3SYB3 417 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 FOXD4L3Q6VB84 417 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 RBBP8NLQ8NC74 664 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 DCAF11Q8TEB1 546 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 WDR89Q96FK6 387 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 CDK11AQ9UQ88 783 aaPredicted RBP7.75□□□□□ -1.17
UPF3A-205ENST00000479712 TNS2Q63HR2 1409 aa7.75□□□□□ -1.17
UPF3A-205ENST00000479712 DEAF1O75398 565 aaPredicted RBP7.74□□□□□ -1.17
UPF3A-205ENST00000479712 LTKP29376 864 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 TRAPPC3LQ5T215 181 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 DTWD1Q8N5C7 304 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 MKL1Q969V6 931 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 ACTR10Q9NZ32 417 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 SHANK3Q9BYB0 1731 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 PRR36Q9H6K5 1346 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 NLRP1Q9C000 1473 aa7.74□□□□□ -1.17
UPF3A-205ENST00000479712 TLDC2A0PJX2 215 aa7.73□□□□□ -1.17
UPF3A-205ENST00000479712 DCDC2CA8MYV0 355 aa7.73□□□□□ -1.17
UPF3A-205ENST00000479712 HTR3BO95264 441 aa7.73□□□□□ -1.17
UPF3A-205ENST00000479712 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
UPF3A-205ENST00000479712 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
UPF3A-205ENST00000479712 WDR18Q9BV38 432 aa7.73□□□□□ -1.17
UPF3A-205ENST00000479712 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
UPF3A-205ENST00000479712 CORINQ9Y5Q5 1042 aa7.73□□□□□ -1.17
UPF3A-205ENST00000479712 PNPLA6Q8IY17 1366 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 MIA2Q96PC5 1412 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 DLGAP3O95886 979 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 PDE4BQ07343 736 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 EZH2Q15910 746 aaKnown RBP7.72□□□□□ -1.17
UPF3A-205ENST00000479712 LRRFIP1Q32MZ4 808 aaKnown RBP7.72□□□□□ -1.17
UPF3A-205ENST00000479712 CYFIP1Q7L576 1253 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 NEDD1Q8NHV4 660 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 WHAMMQ8TF30 809 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 UBASH3BQ8TF42 649 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 SPON1Q9HCB6 807 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 RAD18Q9NS91 495 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 CSADQ9Y600 493 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 TACC3Q9Y6A5 838 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 CAMSAP2Q08AD1 1489 aa7.72□□□□□ -1.17
UPF3A-205ENST00000479712 RALGAPBQ86X10 1494 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 CCDC85CA6NKD9 419 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 MEIS3P2A8K0S8 358 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 AOC2O75106 756 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 KCNA6P17658 529 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 PLCG1P19174 1290 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 RAC1P63000 192 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 PPP2R5EQ16537 467 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 DUOXA2Q1HG44 320 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 ZC3H12AQ5D1E8 599 aaKnown RBP7.71□□□□□ -1.18
UPF3A-205ENST00000479712 C12orf40Q86WS4 652 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 CELF2-AS1Q8N7Q2 184 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 DEPDC7Q96QD5 511 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 ANTXR1Q9H6X2 564 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 ENAMQ9NRM1 1142 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 REV1Q9UBZ9 1251 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms