RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 RAB3GAP1Q15042 981 aa21.47■■□□□ 1.03
PAX3-208ENST00000409828 SHROOM1Q2M3G4 852 aaPredicted RBP21.47■■□□□ 1.03
PAX3-208ENST00000409828 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
PAX3-208ENST00000409828 FASTKD5Q7L8L6 764 aaKnown RBP21.47■■□□□ 1.03
PAX3-208ENST00000409828 PRRT2Q7Z6L0 340 aaPredicted RBP21.47■■□□□ 1.03
PAX3-208ENST00000409828 ESR2Q92731 530 aa21.47■■□□□ 1.03
PAX3-208ENST00000409828 KRT23Q9C075 422 aa21.47■■□□□ 1.03
PAX3-208ENST00000409828 TCP11L1Q9NUJ3 509 aa21.47■■□□□ 1.03
PAX3-208ENST00000409828 TACC3Q9Y6A5 838 aa21.47■■□□□ 1.03
PAX3-208ENST00000409828 TFAP4Q01664 338 aa21.46■■□□□ 1.03
PAX3-208ENST00000409828 STK11IPQ8N1F8 1099 aa21.46■■□□□ 1.03
PAX3-208ENST00000409828 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
PAX3-208ENST00000409828 ZIC5Q96T25 663 aa21.46■■□□□ 1.03
PAX3-208ENST00000409828 KIAA1683Q9H0B3 1180 aa21.46■■□□□ 1.03
PAX3-208ENST00000409828 SH2D4AQ9H788 454 aa21.46■■□□□ 1.03
PAX3-208ENST00000409828 MYH4Q9Y623 1939 aa21.46■■□□□ 1.03
PAX3-208ENST00000409828 PCNTO95613 3336 aa21.45■■□□□ 1.03
PAX3-208ENST00000409828 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 TSPY2A6NKD2 308 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 RANBP6O60518 1105 aaKnown RBP21.45■■□□□ 1.02
PAX3-208ENST00000409828 ALDH1A1P00352 501 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 NOVP48745 357 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 USP14P54578 494 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 ICA1Q05084 483 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 CCL15Q16663 113 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 TSGA10IPQ3SY00 556 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 OTUD7BQ6GQQ9 843 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 ARHGEF10LQ9HCE6 1279 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 NYAP2Q9P242 653 aa21.45■■□□□ 1.02
PAX3-208ENST00000409828 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.45■■□□□ 1.02
PAX3-208ENST00000409828 TRIM75PA6NK02 468 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 SLC27A2O14975 620 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 TRDNQ13061 729 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 MKRN3Q13064 507 aaKnown RBP21.44■■□□□ 1.02
PAX3-208ENST00000409828 MOGSQ13724 837 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 CCDC178Q5BJE1 867 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 CREB3L3Q68CJ9 461 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 SIAH1Q8IUQ4 282 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 BRI3BPQ8WY22 251 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 KCNB2Q92953 911 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 MKL1Q969V6 931 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 C12orf42Q96LP6 360 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 INCENPQ9NQS7 918 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 MTMR4Q9NYA4 1195 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.44■■□□□ 1.02
PAX3-208ENST00000409828 SLC45A1Q9Y2W3 748 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 TMX2Q9Y320 296 aa21.44■■□□□ 1.02
PAX3-208ENST00000409828 CA12O43570 354 aa21.43■■□□□ 1.02
PAX3-208ENST00000409828 USP17L2Q6R6M4 530 aa21.43■■□□□ 1.02
PAX3-208ENST00000409828 CCDC84Q86UT8 332 aaPredicted RBP21.43■■□□□ 1.02
PAX3-208ENST00000409828 TOMM22Q9NS69 142 aa21.43■■□□□ 1.02
PAX3-208ENST00000409828 NEDD4P46934 1319 aa21.43■■□□□ 1.02
PAX3-208ENST00000409828 E7EWF7 191 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 TTLL1O95922 423 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 HSPA4P34932 840 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 FAM47AQ5JRC9 791 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 ANKRD23Q86SG2 305 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 IFNL1Q8IU54 200 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 NCOA7Q8NI08 942 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 CEP95Q96GE4 821 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 TTC14Q96N46 770 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 CFHR5Q9BXR6 569 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 WBP1LQ9NX94 342 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 SAGE1Q9NXZ1 904 aa21.42■■□□□ 1.02
PAX3-208ENST00000409828 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
PAX3-208ENST00000409828 ZKSCAN1P17029 563 aaPredicted RBP21.41■■□□□ 1.02
PAX3-208ENST00000409828 MTMR2Q13614 643 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 RRP12Q5JTH9 1297 aaKnown RBP21.41■■□□□ 1.02
PAX3-208ENST00000409828 IQCA1Q86XH1 822 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 ACER1Q8TDN7 264 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 LPAR1Q92633 364 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 FEZ1Q99689 392 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 PTPN18Q99952 460 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 MTA3Q9BTC8 594 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 USP26Q9BXU7 913 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 IL17RBQ9NRM6 502 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 TMOD4Q9NZQ9 345 aa21.41■■□□□ 1.02
PAX3-208ENST00000409828 A0A1W2PRG0 241 aa21.4■■□□□ 1.02
PAX3-208ENST00000409828 IGF2BP3O00425 579 aaKnown RBP eCLIP21.4■■□□□ 1.02
PAX3-208ENST00000409828 KDM4AO75164 1064 aa21.4■■□□□ 1.02
PAX3-208ENST00000409828 HMGCS2P54868 508 aa21.4■■□□□ 1.02
PAX3-208ENST00000409828 KRT32Q14532 448 aa21.4■■□□□ 1.02
PAX3-208ENST00000409828 ZSWIM5Q9P217 1185 aa21.4■■□□□ 1.02
PAX3-208ENST00000409828 AGTPBP1Q9UPW5 1226 aa21.4■■□□□ 1.02
PAX3-208ENST00000409828 B4E1Z4 1266 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
PAX3-208ENST00000409828 PABPC4Q13310 644 aaKnown RBP eCLIP21.39■■□□□ 1.01
PAX3-208ENST00000409828 C8orf34Q49A92 452 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 GPAT2Q6NUI2 795 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 STOX1Q6ZVD7 989 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 RALYLQ86SE5 291 aaKnown RBP21.39■■□□□ 1.01
PAX3-208ENST00000409828 DGKHQ86XP1 1220 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 ANKS1AQ92625 1134 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 BEGAINQ9BUH8 593 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 VCPKMTQ9H867 229 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 EMILIN3Q9NT22 766 aa21.39■■□□□ 1.01
PAX3-208ENST00000409828 BTBD19C9JJ37 291 aa21.38■■□□□ 1.01
PAX3-208ENST00000409828 GOPCQ9HD26 462 aa21.38■■□□□ 1.01
PAX3-208ENST00000409828 TAF6LQ9Y6J9 622 aa21.38■■□□□ 1.01
PAX3-208ENST00000409828 MCCP23508 829 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms