RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LAMC1P11047 1609 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 ICA1Q05084 483 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 CALCRLQ16602 461 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 GAS2L3Q86XJ1 694 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 FAM212AQ96EL1 285 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 GOLGA6L10A6NI86 522 aa20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 POSTNQ15063 836 aa20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 C17orf53Q8N3J3 647 aaPredicted RBP20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 HERC4Q5GLZ8 1057 aaPredicted RBP20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 CTNNBL1Q8WYA6 563 aaPredicted RBP20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 BICDL2A1A5D9 508 aa20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 CACNB3P54284 484 aa20.22■□□□□ 0.83
PTPDC1-202ENST00000375360 DCAF17Q5H9S7 520 aaPredicted RBP20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 A0A087WWV3 80 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 PHACTR2O75167 634 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 CYLC1P35663 651 aaPredicted RBP20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 TBC1D8BQ0IIM8 1120 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 CCDC65Q8IXS2 484 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 ZBTB9Q96C00 473 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 NEFHP12036 1026 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 TRIM28Q13263 835 aaKnown RBP20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 NR5A1Q13285 461 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 CCDC42Q96M95 316 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 NRXN1Q9ULB1 1477 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 EEF2KMTQ96G04 330 aa20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 LUC7L2Q9Y383 392 aaKnown RBP20.21■□□□□ 0.83
PTPDC1-202ENST00000375360 CSRNP1Q96S65 589 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 SOS2Q07890 1332 aaPredicted RBP20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 FANCCQ00597 558 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 TAX1BP1Q86VP1 789 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 CSGALNACT2Q8N6G5 542 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 SERPINB13Q9UIV8 391 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 USP17L3A6NCW0 530 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 USP17L4A6NCW7 530 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 CLCN1P35523 988 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 USP17L1Q7RTZ2 530 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 FERMT2Q96AC1 680 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 ALS2CR12Q96Q35 445 aa20.2■□□□□ 0.82
PTPDC1-202ENST00000375360 GOLGA6L9A6NEM1 432 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 C21orf2O43822 256 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 GDF11O95390 407 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 NFIXQ14938 502 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 CABP7Q86V35 215 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 CRACR2AQ9BSW2 395 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 PSTPIP2Q9H939 334 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 TECP42680 631 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 PTGDRQ13258 359 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 ATG9AQ7Z3C6 839 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 EIF3JO75822 258 aaKnown RBP20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 CYP2D6P10635 497 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 HARSP12081 509 aaKnown RBP20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 HSPA1LP34931 641 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 SLC16A2P36021 539 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 CETN2P41208 172 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 NDUFA8P51970 172 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 TXNRD1Q16881 649 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 TMEM232C9JQI7 657 aa20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
PTPDC1-202ENST00000375360 USP17L2Q6R6M4 530 aa20.18■□□□□ 0.82
PTPDC1-202ENST00000375360 GUCA1BQ9UMX6 200 aa20.18■□□□□ 0.82
PTPDC1-202ENST00000375360 PDIA6Q15084 440 aa20.18■□□□□ 0.82
PTPDC1-202ENST00000375360 NELFCDQ8IXH7 590 aa20.18■□□□□ 0.82
PTPDC1-202ENST00000375360 VTI1AQ96AJ9 217 aa20.18■□□□□ 0.82
PTPDC1-202ENST00000375360 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
PTPDC1-202ENST00000375360 IGSF22Q8N9C0 903 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 MLKLQ8NB16 471 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 NOC4LQ9BVI4 516 aaKnown RBP20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 ALAS1P13196 640 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 HLTFQ14527 1009 aaKnown RBP eCLIP20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 ABCB5Q2M3G0 1257 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 KCTD1Q719H9 257 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 NEK11Q8NG66 645 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 PCDHA1Q9Y5I3 950 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 MRVI1Q9Y6F6 885 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 CCDC175P0C221 793 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 PREX1Q8TCU6 1659 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 CCDC169A6NNP5 214 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 TECPR2O15040 1411 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 NLRP12P59046 1061 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 RABL6Q3YEC7 729 aaPredicted RBP20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 HAUS3Q68CZ6 603 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 ATP10DQ9P241 1426 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 GINS2Q9Y248 185 aa20.17■□□□□ 0.82
PTPDC1-202ENST00000375360 SH2B2O14492 632 aaPredicted RBP20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 GLT8D2Q9H1C3 349 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 FRMPD1Q5SYB0 1578 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 CDC25AP30304 524 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 RAPGEF1Q13905 1077 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 PRR16Q569H4 304 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 RIPOR2Q9Y4F9 1068 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 CDHR2Q9BYE9 1310 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 CHURC1Q8WUH1 139 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 TAB2Q9NYJ8 693 aa20.16■□□□□ 0.82
PTPDC1-202ENST00000375360 ITPK1Q13572 414 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 TBC1D10CQ8IV04 446 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms