RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Zfp341Q6PGC9 846 aa23.28■■□□□ 1.32
Lig3-204ENSMUST00000131537 Sv2cQ69ZS6 727 aa23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Ppp1r9bQ6R891 817 aaKnown RBP23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Ccdc47Q9D024 483 aaKnown RBP23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 EhhadhQ9DBM2 718 aa23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Rasa3Q60790 834 aa23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Ppp1r10Q80W00 888 aaKnown RBP23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Lca5lQ8C0X0 741 aa23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Fam83aQ8K2P2 436 aa23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Usp31E9Q6Y8 1344 aa23.27■■□□□ 1.32
Lig3-204ENSMUST00000131537 Ces1hD3Z298 562 aa23.26■■□□□ 1.31
Lig3-204ENSMUST00000131537 Vwa3bJ9JI28 736 aa23.26■■□□□ 1.31
Lig3-204ENSMUST00000131537 Syt1P46096 421 aa23.26■■□□□ 1.31
Lig3-204ENSMUST00000131537 1700013D24RikQ0P521 120 aa23.26■■□□□ 1.31
Lig3-204ENSMUST00000131537 Tm4sf4Q91XD3 202 aa23.26■■□□□ 1.31
Lig3-204ENSMUST00000131537 Arrdc4A0A0B4J1F4 415 aa23.25■■□□□ 1.31
Lig3-204ENSMUST00000131537 Cbx2P30658 519 aa23.25■■□□□ 1.31
Lig3-204ENSMUST00000131537 Traf3ip1Q149C2 625 aa23.25■■□□□ 1.31
Lig3-204ENSMUST00000131537 Arhgef6Q8K4I3 771 aa23.25■■□□□ 1.31
Lig3-204ENSMUST00000131537 Cdca7Q9D0M2 382 aa23.25■■□□□ 1.31
Lig3-204ENSMUST00000131537 TicrrQ8BQ33 1889 aa23.25■■□□□ 1.31
Lig3-204ENSMUST00000131537 Gm44503E9PYU5 387 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Oog1E9Q5G7 496 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Magea8O89012 320 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Stat1P42225 749 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Otud5Q3U2S4 566 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Fsd1Q7TPM6 496 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Cog5Q8C0L8 829 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Dnaaf4Q8R368 420 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Kdm4cQ8VCD7 1054 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 HunkO88866 714 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Tmtc2Q56A06 836 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Ces3aQ63880 571 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Slc4a7Q8BTY2 1034 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Tpcn2Q8BWC0 731 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Il31raQ8K5B1 716 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Gimap7Q8R379 293 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Ces3bQ8VCU1 571 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Tubb6Q922F4 447 aa23.24■■□□□ 1.31
Lig3-204ENSMUST00000131537 Cfap99A0A140LIX9 648 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Metap2O08663 478 aaKnown RBP23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Copb2O55029 905 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Serpinb2P12388 415 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Ctdnep1Q3TP92 244 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Filip1lQ6P6L0 1131 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Bola3Q8CEI1 110 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Vmn1r199Q8R280 367 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Ero1bQ8R2E9 467 aa23.23■■□□□ 1.31
Lig3-204ENSMUST00000131537 Naaladl2A0A0N4SUJ3 795 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Fgfr2P21803 821 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Sap30bpQ02614 308 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 OsbpQ3B7Z2 805 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 1700123L14RikQ3V2K7 440 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Slain1Q68FF7 579 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Haus6Q6NV99 933 aaKnown RBP23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 VmacQ8BP01 174 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Rufy2Q8R4C2 606 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Rfc4Q99J62 364 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Rfx1P48377 963 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Ppfia3P60469 1194 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Slc18a1Q8R090 521 aa23.22■■□□□ 1.31
Lig3-204ENSMUST00000131537 Elmsan1E9Q2I4 1089 aaKnown RBP23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Stag2O35638 1231 aa23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Swap70Q6A028 585 aaKnown RBP23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Ccp110Q7TSH4 1004 aa23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Nxf7Q80SZ6 620 aaKnown RBP23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Riox2Q8CD15 465 aa23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Tdrd1Q99MV1 1172 aa23.21■■□□□ 1.31
Lig3-204ENSMUST00000131537 Mms22lB1AUR6 1238 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Arl14Q3SXC5 192 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Sh2d1b2Q45HK4 132 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Adgrg6Q6F3F9 1165 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Alg3Q8K2A8 438 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Dppa3Q8QZY3 150 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Defb15Q8R2I5 79 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Iffo2Q8R2V2 512 aa23.2■■□□□ 1.3
Lig3-204ENSMUST00000131537 Calm1P0DP26 149 aaKnown RBP23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Calm2P0DP27 149 aaKnown RBP23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Calm3P0DP28 149 aaKnown RBP23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 ChgaP26339 463 aaKnown RBP23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Atoh1P48985 351 aa23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Kctd1Q5M956 257 aa23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Ms4a5Q810P8 197 aa23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Mdh1bQ5F204 500 aa23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Lrrc24Q8BHA1 521 aa23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Pxylp1Q8BHA9 480 aa23.19■■□□□ 1.3
Lig3-204ENSMUST00000131537 Thsd7bQ6P4U0 1607 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Gm30191A0A0U1RNT7 187 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Tfcp2l1Q3UNW5 479 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Ttbk2Q3UVR3 1243 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Sfi1Q3UZY0 1216 aaKnown RBP23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Dcaf15Q6PFH3 600 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Dnai1Q8C0M8 701 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Tsr2Q8C8T8 191 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Ccdc178Q8CDV0 866 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Usp33Q8R5K2 909 aa23.18■■□□□ 1.3
Lig3-204ENSMUST00000131537 Usp17ldG5E8G2 545 aa23.17■■□□□ 1.3
Lig3-204ENSMUST00000131537 Usp17lcG5E8I7 545 aa23.17■■□□□ 1.3
Lig3-204ENSMUST00000131537 LdhaP06151 332 aaKnown RBP23.17■■□□□ 1.3
Lig3-204ENSMUST00000131537 Atp6v1dP57746 247 aa23.17■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms