Protein–RNA interactions for Protein: Q8R280

Vmn1r199, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r199Q8R280 Gm25239-201ENSMUST00000174915 86 ntBASIC45.73■■■■■ 4.91
Vmn1r199Q8R280 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.46■■■■■ 4.39
Vmn1r199Q8R280 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
Vmn1r199Q8R280 Gm24109-201ENSMUST00000175489 103 ntBASIC39.81■■■■□ 3.96
Vmn1r199Q8R280 Gm15042-201ENSMUST00000120212 883 ntBASIC39.63■■■■□ 3.93
Vmn1r199Q8R280 Gm15045-201ENSMUST00000117359 883 ntBASIC38.65■■■■□ 3.78
Vmn1r199Q8R280 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
Vmn1r199Q8R280 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.61■■■■□ 3.77
Vmn1r199Q8R280 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
Vmn1r199Q8R280 Gm23366-201ENSMUST00000175022 89 ntBASIC38.15■■■■□ 3.7
Vmn1r199Q8R280 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Vmn1r199Q8R280 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Vmn1r199Q8R280 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.26■■■■□ 3.56
Vmn1r199Q8R280 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Vmn1r199Q8R280 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Vmn1r199Q8R280 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.92■■■■□ 3.5
Vmn1r199Q8R280 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.92■■■■□ 3.5
Vmn1r199Q8R280 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Vmn1r199Q8R280 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.66■■■■□ 3.46
Vmn1r199Q8R280 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
Vmn1r199Q8R280 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Vmn1r199Q8R280 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Vmn1r199Q8R280 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.23■■■■□ 3.39
Vmn1r199Q8R280 Gm25238-201ENSMUST00000174914 89 ntBASIC36.19■■■■□ 3.38
Vmn1r199Q8R280 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.18■■■■□ 3.38
Vmn1r199Q8R280 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
Vmn1r199Q8R280 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Vmn1r199Q8R280 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.83■■■■□ 3.33
Vmn1r199Q8R280 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Vmn1r199Q8R280 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Vmn1r199Q8R280 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
Vmn1r199Q8R280 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
Vmn1r199Q8R280 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.45■■■■□ 3.27
Vmn1r199Q8R280 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Vmn1r199Q8R280 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.17■■■■□ 3.22
Vmn1r199Q8R280 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.09■■■■□ 3.21
Vmn1r199Q8R280 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.08■■■■□ 3.21
Vmn1r199Q8R280 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Vmn1r199Q8R280 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.97■■■■□ 3.19
Vmn1r199Q8R280 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Vmn1r199Q8R280 Gm25262-201ENSMUST00000174934 133 ntBASIC34.87■■■■□ 3.17
Vmn1r199Q8R280 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Vmn1r199Q8R280 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.72■■■■□ 3.15
Vmn1r199Q8R280 Gm27325-201ENSMUST00000175467 74 ntBASIC34.64■■■■□ 3.14
Vmn1r199Q8R280 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Vmn1r199Q8R280 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Vmn1r199Q8R280 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.39■■■■□ 3.1
Vmn1r199Q8R280 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Vmn1r199Q8R280 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.3■■■■□ 3.08
Vmn1r199Q8R280 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.27■■■■□ 3.08
Vmn1r199Q8R280 Rab21-202ENSMUST00000218831 843 ntBASIC34.25■■■■□ 3.07
Vmn1r199Q8R280 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.21■■■■□ 3.07
Vmn1r199Q8R280 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.15■■■■□ 3.06
Vmn1r199Q8R280 Gm26115-201ENSMUST00000175605 87 ntBASIC34.15■■■■□ 3.06
Vmn1r199Q8R280 Psd-208ENSMUST00000224556 2034 ntBASIC34.11■■■■□ 3.05
Vmn1r199Q8R280 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Vmn1r199Q8R280 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Vmn1r199Q8R280 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34■■■■□ 3.03
Vmn1r199Q8R280 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
Vmn1r199Q8R280 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.95■■■■□ 3.03
Vmn1r199Q8R280 Gm8109-201ENSMUST00000194076 746 ntBASIC33.92■■■■□ 3.02
Vmn1r199Q8R280 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
Vmn1r199Q8R280 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Vmn1r199Q8R280 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Vmn1r199Q8R280 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.79■■■■□ 3
Vmn1r199Q8R280 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.78■■■■□ 3
Vmn1r199Q8R280 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.74■■■□□ 2.99
Vmn1r199Q8R280 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
Vmn1r199Q8R280 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.57■■■□□ 2.96
Vmn1r199Q8R280 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Vmn1r199Q8R280 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Vmn1r199Q8R280 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.52■■■□□ 2.96
Vmn1r199Q8R280 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Vmn1r199Q8R280 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.5■■■□□ 2.95
Vmn1r199Q8R280 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Vmn1r199Q8R280 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Vmn1r199Q8R280 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.36■■■□□ 2.93
Vmn1r199Q8R280 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Vmn1r199Q8R280 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Vmn1r199Q8R280 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Vmn1r199Q8R280 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Vmn1r199Q8R280 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Vmn1r199Q8R280 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.08■■■□□ 2.89
Vmn1r199Q8R280 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
Vmn1r199Q8R280 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.06■■■□□ 2.88
Vmn1r199Q8R280 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Vmn1r199Q8R280 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.04■■■□□ 2.88
Vmn1r199Q8R280 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Vmn1r199Q8R280 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Vmn1r199Q8R280 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.97■■■□□ 2.87
Vmn1r199Q8R280 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Vmn1r199Q8R280 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
Vmn1r199Q8R280 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.92■■■□□ 2.86
Vmn1r199Q8R280 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Vmn1r199Q8R280 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
Vmn1r199Q8R280 Gm27322-201ENSMUST00000184007 104 ntBASIC32.82■■■□□ 2.84
Vmn1r199Q8R280 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Vmn1r199Q8R280 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Vmn1r199Q8R280 Gm24804-201ENSMUST00000174982 85 ntBASIC32.76■■■□□ 2.83
Vmn1r199Q8R280 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.75■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms