RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 H2al1kJ3QP08 105 aa4.6□□□□□ -1.67
Chfr-212ENSMUST00000200038 H2al1mQ9DAD9 105 aa4.6□□□□□ -1.67
Chfr-212ENSMUST00000200038 Gm4553A0A1B0GSA9 284 aa4.54□□□□□ -1.68
Chfr-212ENSMUST00000200038 Rps28P62858 69 aaKnown RBP4.53□□□□□ -1.68
Chfr-212ENSMUST00000200038 Pcp4P63054 62 aa4.53□□□□□ -1.68
Chfr-212ENSMUST00000200038 Gm10272F7CZ33 110 aa4.52□□□□□ -1.69
Chfr-212ENSMUST00000200038 Krtap7-1Q9D3I6 87 aa4.52□□□□□ -1.69
Chfr-212ENSMUST00000200038 Gm11568A2A4M2 211 aa4.51□□□□□ -1.69
Chfr-212ENSMUST00000200038 Krtap9-1Q64526 186 aa4.51□□□□□ -1.69
Chfr-212ENSMUST00000200038 Gm12216A0A1W2P827 62 aa4.49□□□□□ -1.69
Chfr-212ENSMUST00000200038 Kmt2dQ6PDK2 5588 aa4.48□□□□□ -1.69
Chfr-212ENSMUST00000200038 Macf1Q9QXZ0 7354 aaKnown RBP4.47□□□□□ -1.69
Chfr-212ENSMUST00000200038 Lce1fB9EJP6 147 aa4.44□□□□□ -1.7
Chfr-212ENSMUST00000200038 Lce1cQ9D1C5 147 aa4.44□□□□□ -1.7
Chfr-212ENSMUST00000200038 Gm11639A0A1D5RLM8 5808 aa4.44□□□□□ -1.7
Chfr-212ENSMUST00000200038 Syne1Q6ZWR6 8799 aa4.41□□□□□ -1.7
Chfr-212ENSMUST00000200038 Gm2431E9Q8S1 172 aa4.38□□□□□ -1.71
Chfr-212ENSMUST00000200038 Ndufs5Q99LY9 106 aa4.38□□□□□ -1.71
Chfr-212ENSMUST00000200038 Gm45337A0A1B0GS71 263 aa4.33□□□□□ -1.72
Chfr-212ENSMUST00000200038 Romo1P60603 79 aa4.3□□□□□ -1.72
Chfr-212ENSMUST00000200038 Krtap19-4Q925H7 84 aa4.3□□□□□ -1.72
Chfr-212ENSMUST00000200038 Gm11938Q9D3H4 131 aa4.26□□□□□ -1.73
Chfr-212ENSMUST00000200038 Sox16Q62247 57 aa4.24□□□□□ -1.73
Chfr-212ENSMUST00000200038 Muc19Q6PZE0 7524 aa4.22□□□□□ -1.73
Chfr-212ENSMUST00000200038 Tnp1P10856 55 aa4.21□□□□□ -1.74
Chfr-212ENSMUST00000200038 Mt1P02802 61 aaKnown RBP4.2□□□□□ -1.74
Chfr-212ENSMUST00000200038 Gpr98Q8VHN7 6298 aaKnown RBP4.2□□□□□ -1.74
Chfr-212ENSMUST00000200038 Gm10153A0A1B0GRL1 320 aa4.18□□□□□ -1.74
Chfr-212ENSMUST00000200038 4933415A04RikQ9D443 101 aa4.18□□□□□ -1.74
Chfr-212ENSMUST00000200038 Hmcn1D3YXG0 5634 aa4.18□□□□□ -1.74
Chfr-212ENSMUST00000200038 Gm40460A0A1B0GR10 244 aa4.16□□□□□ -1.74
Chfr-212ENSMUST00000200038 Gm7579A0A1B0GRJ4 243 aa4.16□□□□□ -1.74
Chfr-212ENSMUST00000200038 Gm10337F7DEP7 55 aa4.16□□□□□ -1.74
Chfr-212ENSMUST00000200038 Krtap5-5Q2TA51 241 aa4.16□□□□□ -1.74
Chfr-212ENSMUST00000200038 Krtap5-4Q62220 223 aa4.16□□□□□ -1.74
Chfr-212ENSMUST00000200038 SvipQ3UZP4 77 aa4.15□□□□□ -1.75
Chfr-212ENSMUST00000200038 Gm39115A0A1B0GSH7 232 aa4.13□□□□□ -1.75
Chfr-212ENSMUST00000200038 Lce3cQ91V05 98 aa4.12□□□□□ -1.75
Chfr-212ENSMUST00000200038 A030003K21RikA0A1Y7VIM3 128 aa4.1□□□□□ -1.75
Chfr-212ENSMUST00000200038 Gm3646F6S692 53 aa4.05□□□□□ -1.76
Chfr-212ENSMUST00000200038 Lce3dE9Q8V1 98 aa4.04□□□□□ -1.76
Chfr-212ENSMUST00000200038 Gm40193A0A1B0GT39 78 aa4□□□□□ -1.77
Chfr-212ENSMUST00000200038 Sprr2fO70557 76 aa4□□□□□ -1.77
Chfr-212ENSMUST00000200038 DstQ91ZU6 7393 aaKnown RBP3.99□□□□□ -1.77
Chfr-212ENSMUST00000200038 Krtap4-16Q91W93 202 aa3.98□□□□□ -1.77
Chfr-212ENSMUST00000200038 Mt3P28184 68 aa3.96□□□□□ -1.78
Chfr-212ENSMUST00000200038 Gm6217A0A1Y7VJK9 128 aa3.93□□□□□ -1.78
Chfr-212ENSMUST00000200038 NebE9Q1W3 7152 aa3.91□□□□□ -1.78
Chfr-212ENSMUST00000200038 Lce3eF8VQJ0 98 aa3.9□□□□□ -1.79
Chfr-212ENSMUST00000200038 Lce3fQ6PAI4 98 aa3.9□□□□□ -1.79
Chfr-212ENSMUST00000200038 Gm45618A0A1B0GSA0 219 aa3.87□□□□□ -1.79
Chfr-212ENSMUST00000200038 4933428G20RikQ9D3X4 101 aa3.87□□□□□ -1.79
Chfr-212ENSMUST00000200038 A0A286YCP9 139 aa3.85□□□□□ -1.79
Chfr-212ENSMUST00000200038 Krtap31-2Q8CAY5 177 aa3.85□□□□□ -1.79
Chfr-212ENSMUST00000200038 AhnakE9Q616 5656 aaKnown RBP3.77□□□□□ -1.81
Chfr-212ENSMUST00000200038 Lce3aQ497I5 98 aa3.74□□□□□ -1.81
Chfr-212ENSMUST00000200038 ObscnA2AAJ9 8891 aaKnown RBP3.71□□□□□ -1.82
Chfr-212ENSMUST00000200038 Gm10100J3QK64 120 aa3.7□□□□□ -1.82
Chfr-212ENSMUST00000200038 Sprr2dO70555 85 aa3.58□□□□□ -1.84
Chfr-212ENSMUST00000200038 Sprr2eO70556 76 aa3.54□□□□□ -1.84
Chfr-212ENSMUST00000200038 Gm20538F6Z9R1 75 aa3.47□□□□□ -1.85
Chfr-212ENSMUST00000200038 Mp68P56379 58 aa3.47□□□□□ -1.85
Chfr-212ENSMUST00000200038 Gm10024A0A0A0MQA4 119 aa3.35□□□□□ -1.87
Chfr-212ENSMUST00000200038 Krtap31-1Q9D644 177 aa3.35□□□□□ -1.87
Chfr-212ENSMUST00000200038 Gm11567Q9D141 195 aa3.24□□□□□ -1.89
Chfr-212ENSMUST00000200038 Gm10142J3KMP7 120 aa3.23□□□□□ -1.89
Chfr-212ENSMUST00000200038 Sprr2hO70559 108 aa3.23□□□□□ -1.89
Chfr-212ENSMUST00000200038 Gm29735A0A1B0GT06 219 aa3.14□□□□□ -1.91
Chfr-212ENSMUST00000200038 1110025L11RikO09048 78 aa3.01□□□□□ -1.93
Chfr-212ENSMUST00000200038 Krtap6-5Q925H3 78 aa3.01□□□□□ -1.93
Chfr-212ENSMUST00000200038 Muc16A0A140LJ72 8478 aa2.97□□□□□ -1.93
Chfr-212ENSMUST00000200038 Ndufaf8A2AMZ4 74 aa2.83□□□□□ -1.96
Chfr-212ENSMUST00000200038 Gm10229O08631 77 aa2.71□□□□□ -1.98
Chfr-212ENSMUST00000200038 Sprr2bO70554 98 aa2.52□□□□□ -2.01
Chfr-212ENSMUST00000200038 Krtap6-2O08884 159 aa2.43□□□□□ -2.02
Chfr-212ENSMUST00000200038 Krtap21-1Q925H4 128 aa2.41□□□□□ -2.02
Chfr-212ENSMUST00000200038 Gm9112A2AI92 75 aa2.4□□□□□ -2.03
Chfr-212ENSMUST00000200038 Krtap5-1Q64507 230 aa2.4□□□□□ -2.03
Chfr-212ENSMUST00000200038 Gm4559A4IF42 199 aa2.04□□□□□ -2.08
Chfr-212ENSMUST00000200038 Phgr1Q8K0G7 91 aa1.99□□□□□ -2.09
Retrieved 80 of 22,080 RNA–protein pairs in 79 ms