RNA–Protein interactions for RNA: ENSMUST00000193739.5

Pcdh15-238, Transcript of Protocadherin-15, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Pcdh15, Length 5,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-238ENSMUST00000193739 Syne2Q6ZWQ0 6874 aaKnown RBP3.65□□□□□ -1.82
Pcdh15-238ENSMUST00000193739 Krtap31-1Q9D644 177 aa3.65□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Eppk1Q8R0W0 6548 aa3.63□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Krtap4-7Q9D732 168 aa3.62□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Mdn1A2ANY6 5589 aaKnown RBP3.61□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 2300003K06RikA2A4M0 262 aa3.6□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Fat4Q2PZL6 4981 aa3.6□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Sprr2eO70556 76 aa3.6□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Lce1iQ9D6P5 149 aa3.6□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Lce1hQ9D6R3 140 aa3.6□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 ZanO88799 5376 aa3.59□□□□□ -1.83
Pcdh15-238ENSMUST00000193739 Lce1eQ9D139 143 aa3.59□□□□□ -1.84
Pcdh15-238ENSMUST00000193739 Krtap4-13Q9D7P3 165 aa3.56□□□□□ -1.84
Pcdh15-238ENSMUST00000193739 Abca13Q5SSE9 5034 aa3.55□□□□□ -1.84
Pcdh15-238ENSMUST00000193739 Pkhd1E9PZ36 4059 aa3.52□□□□□ -1.85
Pcdh15-238ENSMUST00000193739 Syne1Q6ZWR6 8799 aa3.51□□□□□ -1.85
Pcdh15-238ENSMUST00000193739 Ubr4A2AN08 5180 aa3.49□□□□□ -1.85
Pcdh15-238ENSMUST00000193739 Lce1a1Q9CQH5 143 aa3.47□□□□□ -1.85
Pcdh15-238ENSMUST00000193739 Lce1a2Q9D1K4 149 aa3.44□□□□□ -1.86
Pcdh15-238ENSMUST00000193739 Ush2AQ2QI47 5193 aa3.43□□□□□ -1.86
Pcdh15-238ENSMUST00000193739 Rnf213E9Q555 5152 aaKnown RBP3.42□□□□□ -1.86
Pcdh15-238ENSMUST00000193739 Lce1kJ3QP15 125 aa3.28□□□□□ -1.88
Pcdh15-238ENSMUST00000193739 Krtap4-16Q91W93 202 aa3.27□□□□□ -1.89
Pcdh15-238ENSMUST00000193739 SspoQ8CG65 4998 aa3.26□□□□□ -1.89
Pcdh15-238ENSMUST00000193739 Krtap20-2E9Q0A8 60 aa3.24□□□□□ -1.89
Pcdh15-238ENSMUST00000193739 Mt3P28184 68 aa3.22□□□□□ -1.89
Pcdh15-238ENSMUST00000193739 Gm11555B1AQ89 175 aa3.22□□□□□ -1.89
Pcdh15-238ENSMUST00000193739 Fsip2A2ARZ3 6995 aa3.21□□□□□ -1.9
Pcdh15-238ENSMUST00000193739 Hmcn2A2AJ76 5100 aa3.21□□□□□ -1.9
Pcdh15-238ENSMUST00000193739 Gm11554B1AQB2 190 aa3.16□□□□□ -1.9
Pcdh15-238ENSMUST00000193739 A0A1Y7VLE6 161 aa3.11□□□□□ -1.91
Pcdh15-238ENSMUST00000193739 Mt1P02802 61 aaKnown RBP3.1□□□□□ -1.91
Pcdh15-238ENSMUST00000193739 Krtap31-2Q8CAY5 177 aa3.1□□□□□ -1.91
Pcdh15-238ENSMUST00000193739 Sprr2bO70554 98 aa3□□□□□ -1.93
Pcdh15-238ENSMUST00000193739 Gpr98Q8VHN7 6298 aaKnown RBP2.94□□□□□ -1.94
Pcdh15-238ENSMUST00000193739 A030003K21RikA0A1Y7VIM3 128 aa2.86□□□□□ -1.95
Pcdh15-238ENSMUST00000193739 ObscnA2AAJ9 8891 aaKnown RBP2.86□□□□□ -1.95
Pcdh15-238ENSMUST00000193739 A0A1Y7VJH8 109 aa2.73□□□□□ -1.97
Pcdh15-238ENSMUST00000193739 Kmt2dQ6PDK2 5588 aa2.72□□□□□ -1.97
Pcdh15-238ENSMUST00000193739 Gm11559Q9D3H7 191 aa2.72□□□□□ -1.97
Pcdh15-238ENSMUST00000193739 Muc16A0A140LJ72 8478 aa2.7□□□□□ -1.98
Pcdh15-238ENSMUST00000193739 DstQ91ZU6 7393 aaKnown RBP2.7□□□□□ -1.98
Pcdh15-238ENSMUST00000193739 Gm6217A0A1Y7VJK9 128 aa2.69□□□□□ -1.98
Pcdh15-238ENSMUST00000193739 Macf1Q9QXZ0 7354 aaKnown RBP2.65□□□□□ -1.99
Pcdh15-238ENSMUST00000193739 Krtap28-10A0A1Y7VP58 119 aa2.64□□□□□ -1.99
Pcdh15-238ENSMUST00000193739 NebE9Q1W3 7152 aa2.62□□□□□ -1.99
Pcdh15-238ENSMUST00000193739 Gm11639A0A1D5RLM8 5808 aa2.59□□□□□ -2
Pcdh15-238ENSMUST00000193739 Krtap28-13A0A087WQP5 138 aa2.55□□□□□ -2
Pcdh15-238ENSMUST00000193739 A030005K14RikA0A1Y7VNY1 122 aa2.53□□□□□ -2
Pcdh15-238ENSMUST00000193739 Gm7544A0A1Y7VJ58 118 aa2.5□□□□□ -2.01
Pcdh15-238ENSMUST00000193739 A0A1Y7VJ07 166 aa2.48□□□□□ -2.01
Pcdh15-238ENSMUST00000193739 Krtap9-1Q64526 186 aa2.45□□□□□ -2.02
Pcdh15-238ENSMUST00000193739 A030005L19RikA0A1Y7VIU2 113 aa2.45□□□□□ -2.02
Pcdh15-238ENSMUST00000193739 1110025L11RikO09048 78 aa2.44□□□□□ -2.02
Pcdh15-238ENSMUST00000193739 Krtap6-5Q925H3 78 aa2.44□□□□□ -2.02
Pcdh15-238ENSMUST00000193739 Krtap5-2Q9D5Z7 189 aa2.4□□□□□ -2.03
Pcdh15-238ENSMUST00000193739 Hmcn1D3YXG0 5634 aa2.4□□□□□ -2.03
Pcdh15-238ENSMUST00000193739 Gm11568A2A4M2 211 aa2.37□□□□□ -2.03
Pcdh15-238ENSMUST00000193739 Gm4553A0A1B0GSA9 284 aa2.35□□□□□ -2.03
Pcdh15-238ENSMUST00000193739 Gm10229O08631 77 aa2.27□□□□□ -2.05
Pcdh15-238ENSMUST00000193739 Phgr1Q8K0G7 91 aa2.27□□□□□ -2.05
Pcdh15-238ENSMUST00000193739 A030014E15RikA0A1Y7VJV2 120 aa2.22□□□□□ -2.05
Pcdh15-238ENSMUST00000193739 Gm2431E9Q8S1 172 aa2.14□□□□□ -2.07
Pcdh15-238ENSMUST00000193739 AhnakE9Q616 5656 aaKnown RBP2.1□□□□□ -2.07
Pcdh15-238ENSMUST00000193739 Muc19Q6PZE0 7524 aa2.09□□□□□ -2.07
Pcdh15-238ENSMUST00000193739 Gm45337A0A1B0GS71 263 aa2.03□□□□□ -2.08
Pcdh15-238ENSMUST00000193739 Gm40460A0A1B0GR10 244 aa2.01□□□□□ -2.09
Pcdh15-238ENSMUST00000193739 Gm7579A0A1B0GRJ4 243 aa2.01□□□□□ -2.09
Pcdh15-238ENSMUST00000193739 Krtap5-5Q2TA51 241 aa2.01□□□□□ -2.09
Pcdh15-238ENSMUST00000193739 Krtap5-4Q62220 223 aa2.01□□□□□ -2.09
Pcdh15-238ENSMUST00000193739 Gm39115A0A1B0GSH7 232 aa1.98□□□□□ -2.09
Pcdh15-238ENSMUST00000193739 Gm11567Q9D141 195 aa1.94□□□□□ -2.1
Pcdh15-238ENSMUST00000193739 Gm10153A0A1B0GRL1 320 aa1.9□□□□□ -2.1
Pcdh15-238ENSMUST00000193739 Gm45618A0A1B0GSA0 219 aa1.86□□□□□ -2.11
Pcdh15-238ENSMUST00000193739 A0A286YCP9 139 aa1.84□□□□□ -2.12
Pcdh15-238ENSMUST00000193739 Krtap6-2O08884 159 aa1.82□□□□□ -2.12
Pcdh15-238ENSMUST00000193739 Krtap21-1Q925H4 128 aa1.76□□□□□ -2.13
Pcdh15-238ENSMUST00000193739 Gm29735A0A1B0GT06 219 aa1.5□□□□□ -2.17
Pcdh15-238ENSMUST00000193739 Krtap5-1Q64507 230 aa1.28□□□□□ -2.2
Pcdh15-238ENSMUST00000193739 Gm4559A4IF42 199 aa0.85□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms