RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Ryr3A2AGL3 4863 aa3.53□□□□□ -1.84
Col6a3-208ENSMUST00000188587 Krtap4-13Q9D7P3 165 aa3.53□□□□□ -1.84
Col6a3-208ENSMUST00000188587 Lce1a1Q9CQH5 143 aa3.47□□□□□ -1.85
Col6a3-208ENSMUST00000188587 Sprr2bO70554 98 aa3.47□□□□□ -1.85
Col6a3-208ENSMUST00000188587 Syne2Q6ZWQ0 6874 aaKnown RBP3.43□□□□□ -1.86
Col6a3-208ENSMUST00000188587 Herc2Q4U2R1 4836 aa3.4□□□□□ -1.86
Col6a3-208ENSMUST00000188587 ZanO88799 5376 aa3.38□□□□□ -1.87
Col6a3-208ENSMUST00000188587 Krtap4-16Q91W93 202 aa3.37□□□□□ -1.87
Col6a3-208ENSMUST00000188587 Ryr2E9Q401 4966 aaKnown RBP3.35□□□□□ -1.87
Col6a3-208ENSMUST00000188587 Syne1Q6ZWR6 8799 aa3.35□□□□□ -1.87
Col6a3-208ENSMUST00000188587 PcloQ9QYX7 5068 aa3.33□□□□□ -1.88
Col6a3-208ENSMUST00000188587 Krtap6-3A0A087WQL6 57 aa3.23□□□□□ -1.89
Col6a3-208ENSMUST00000188587 Fsip2A2ARZ3 6995 aa3.23□□□□□ -1.89
Col6a3-208ENSMUST00000188587 Gm11554B1AQB2 190 aa3.22□□□□□ -1.89
Col6a3-208ENSMUST00000188587 Herc1E9PZP8 4859 aa3.2□□□□□ -1.9
Col6a3-208ENSMUST00000188587 Krtap17-1A2A5X6 109 aa3.18□□□□□ -1.9
Col6a3-208ENSMUST00000188587 Hmcn2A2AJ76 5100 aa3.16□□□□□ -1.9
Col6a3-208ENSMUST00000188587 Mt1P02802 61 aaKnown RBP3.14□□□□□ -1.91
Col6a3-208ENSMUST00000188587 Birc6O88738 4882 aa3.05□□□□□ -1.92
Col6a3-208ENSMUST00000188587 Muc5bE9Q5I3 4800 aa3.02□□□□□ -1.93
Col6a3-208ENSMUST00000188587 Krtap20-2E9Q0A8 60 aa2.99□□□□□ -1.93
Col6a3-208ENSMUST00000188587 HydinQ80W93 5154 aa2.97□□□□□ -1.93
Col6a3-208ENSMUST00000188587 Mdn1A2ANY6 5589 aaKnown RBP2.97□□□□□ -1.93
Col6a3-208ENSMUST00000188587 Kiaa1109A2AAE1 5005 aa2.92□□□□□ -1.94
Col6a3-208ENSMUST00000188587 4932415D10RikA0A1W2P6U8 4986 aa2.91□□□□□ -1.94
Col6a3-208ENSMUST00000188587 Ubr4A2AN08 5180 aa2.89□□□□□ -1.95
Col6a3-208ENSMUST00000188587 Abca13Q5SSE9 5034 aa2.86□□□□□ -1.95
Col6a3-208ENSMUST00000188587 Muc16A0A140LJ72 8478 aa2.79□□□□□ -1.96
Col6a3-208ENSMUST00000188587 ObscnA2AAJ9 8891 aaKnown RBP2.74□□□□□ -1.97
Col6a3-208ENSMUST00000188587 Fat4Q2PZL6 4981 aa2.66□□□□□ -1.98
Col6a3-208ENSMUST00000188587 1110025L11RikO09048 78 aa2.6□□□□□ -1.99
Col6a3-208ENSMUST00000188587 Krtap6-5Q925H3 78 aa2.6□□□□□ -1.99
Col6a3-208ENSMUST00000188587 SspoQ8CG65 4998 aa2.58□□□□□ -2
Col6a3-208ENSMUST00000188587 Gm11555B1AQ89 175 aa2.54□□□□□ -2
Col6a3-208ENSMUST00000188587 Gm10229O08631 77 aa2.54□□□□□ -2
Col6a3-208ENSMUST00000188587 Rnf213E9Q555 5152 aaKnown RBP2.51□□□□□ -2.01
Col6a3-208ENSMUST00000188587 Ush2AQ2QI47 5193 aa2.45□□□□□ -2.02
Col6a3-208ENSMUST00000188587 Phgr1Q8K0G7 91 aa2.41□□□□□ -2.02
Col6a3-208ENSMUST00000188587 Gm11559Q9D3H7 191 aa2.35□□□□□ -2.03
Col6a3-208ENSMUST00000188587 Macf1Q9QXZ0 7354 aaKnown RBP2.3□□□□□ -2.04
Col6a3-208ENSMUST00000188587 DstQ91ZU6 7393 aaKnown RBP2.27□□□□□ -2.05
Col6a3-208ENSMUST00000188587 Gm11568A2A4M2 211 aa2.24□□□□□ -2.05
Col6a3-208ENSMUST00000188587 Krtap9-1Q64526 186 aa2.24□□□□□ -2.05
Col6a3-208ENSMUST00000188587 Muc19Q6PZE0 7524 aa2.21□□□□□ -2.05
Col6a3-208ENSMUST00000188587 Eppk1Q8R0W0 6548 aa2.2□□□□□ -2.06
Col6a3-208ENSMUST00000188587 NebE9Q1W3 7152 aa2.18□□□□□ -2.06
Col6a3-208ENSMUST00000188587 Kmt2dQ6PDK2 5588 aa2.15□□□□□ -2.07
Col6a3-208ENSMUST00000188587 Krtap6-2O08884 159 aa1.99□□□□□ -2.09
Col6a3-208ENSMUST00000188587 Krtap5-2Q9D5Z7 189 aa1.9□□□□□ -2.11
Col6a3-208ENSMUST00000188587 Gm11567Q9D141 195 aa1.86□□□□□ -2.11
Col6a3-208ENSMUST00000188587 Gm4553A0A1B0GSA9 284 aa1.78□□□□□ -2.13
Col6a3-208ENSMUST00000188587 Krtap21-1Q925H4 128 aa1.77□□□□□ -2.13
Col6a3-208ENSMUST00000188587 Hmcn1D3YXG0 5634 aa1.75□□□□□ -2.13
Col6a3-208ENSMUST00000188587 A030005L19RikA0A1Y7VIU2 113 aa1.64□□□□□ -2.15
Col6a3-208ENSMUST00000188587 Gm2431E9Q8S1 172 aa1.63□□□□□ -2.15
Col6a3-208ENSMUST00000188587 Gm10153A0A1B0GRL1 320 aa1.54□□□□□ -2.16
Col6a3-208ENSMUST00000188587 Gm11639A0A1D5RLM8 5808 aa1.5□□□□□ -2.17
Col6a3-208ENSMUST00000188587 Gm45337A0A1B0GS71 263 aa1.45□□□□□ -2.18
Col6a3-208ENSMUST00000188587 Gpr98Q8VHN7 6298 aaKnown RBP1.45□□□□□ -2.18
Col6a3-208ENSMUST00000188587 Gm39115A0A1B0GSH7 232 aa1.41□□□□□ -2.18
Col6a3-208ENSMUST00000188587 Gm40460A0A1B0GR10 244 aa1.37□□□□□ -2.19
Col6a3-208ENSMUST00000188587 Gm7579A0A1B0GRJ4 243 aa1.37□□□□□ -2.19
Col6a3-208ENSMUST00000188587 Krtap5-5Q2TA51 241 aa1.37□□□□□ -2.19
Col6a3-208ENSMUST00000188587 Krtap5-4Q62220 223 aa1.37□□□□□ -2.19
Col6a3-208ENSMUST00000188587 AhnakE9Q616 5656 aaKnown RBP1.23□□□□□ -2.21
Col6a3-208ENSMUST00000188587 A0A1Y7VJH8 109 aa1.09□□□□□ -2.24
Col6a3-208ENSMUST00000188587 Gm45618A0A1B0GSA0 219 aa1.08□□□□□ -2.24
Col6a3-208ENSMUST00000188587 Krtap5-1Q64507 230 aa1.06□□□□□ -2.24
Col6a3-208ENSMUST00000188587 Gm29735A0A1B0GT06 219 aa1.05□□□□□ -2.24
Col6a3-208ENSMUST00000188587 A0A1Y7VLE6 161 aa1.03□□□□□ -2.24
Col6a3-208ENSMUST00000188587 A0A286YCP9 139 aa0.7□□□□□ -2.3
Col6a3-208ENSMUST00000188587 A0A1Y7VJ07 166 aa0.67□□□□□ -2.3
Col6a3-208ENSMUST00000188587 Krtap28-13A0A087WQP5 138 aa0.58□□□□□ -2.32
Col6a3-208ENSMUST00000188587 A030014E15RikA0A1Y7VJV2 120 aa0.58□□□□□ -2.32
Col6a3-208ENSMUST00000188587 Gm4559A4IF42 199 aa0.54□□□□□ -2.32
Col6a3-208ENSMUST00000188587 Gm7544A0A1Y7VJ58 118 aa0.53□□□□□ -2.33
Col6a3-208ENSMUST00000188587 Krtap28-10A0A1Y7VP58 119 aa0.48□□□□□ -2.33
Col6a3-208ENSMUST00000188587 A030005K14RikA0A1Y7VNY1 122 aa0.47□□□□□ -2.33
Col6a3-208ENSMUST00000188587 A030003K21RikA0A1Y7VIM3 128 aa0.47□□□□□ -2.33
Col6a3-208ENSMUST00000188587 Gm6217A0A1Y7VJK9 128 aa0.47□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 105 ms