RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Sox16Q62247 57 aa6.64□□□□□ -1.35
Sqstm1-205ENSMUST00000143379 Uqcr11Q9CPX8 56 aa6.61□□□□□ -1.35
Sqstm1-205ENSMUST00000143379 H2al1bA0A087WP11 105 aa6.56□□□□□ -1.36
Sqstm1-205ENSMUST00000143379 Gm45337A0A1B0GS71 263 aa6.52□□□□□ -1.37
Sqstm1-205ENSMUST00000143379 Hmcn1D3YXG0 5634 aa6.47□□□□□ -1.37
Sqstm1-205ENSMUST00000143379 Gm10337F7DEP7 55 aa6.46□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 NebE9Q1W3 7152 aa6.45□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 Camk2n1Q6QWF9 78 aa6.45□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 DstQ91ZU6 7393 aaKnown RBP6.44□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 SvipQ3UZP4 77 aa6.43□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 H2al1kJ3QP08 105 aa6.41□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 H2al1mQ9DAD9 105 aa6.41□□□□□ -1.38
Sqstm1-205ENSMUST00000143379 Lce3bQ9CQM7 98 aa6.34□□□□□ -1.39
Sqstm1-205ENSMUST00000143379 Gm39115A0A1B0GSH7 232 aa6.32□□□□□ -1.4
Sqstm1-205ENSMUST00000143379 Lce1fB9EJP6 147 aa6.28□□□□□ -1.4
Sqstm1-205ENSMUST00000143379 Lce1cQ9D1C5 147 aa6.28□□□□□ -1.4
Sqstm1-205ENSMUST00000143379 4933415A04RikQ9D443 101 aa6.27□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Krtap4-16Q91W93 202 aa6.26□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Gm40460A0A1B0GR10 244 aa6.24□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Gm7579A0A1B0GRJ4 243 aa6.24□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Krtap5-5Q2TA51 241 aa6.24□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Krtap5-4Q62220 223 aa6.24□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Gm10153A0A1B0GRL1 320 aa6.22□□□□□ -1.41
Sqstm1-205ENSMUST00000143379 Krtap19-4Q925H7 84 aa6.13□□□□□ -1.43
Sqstm1-205ENSMUST00000143379 Gm10272F7CZ33 110 aa6.08□□□□□ -1.44
Sqstm1-205ENSMUST00000143379 Gm45618A0A1B0GSA0 219 aa6.05□□□□□ -1.44
Sqstm1-205ENSMUST00000143379 Ndufs5Q99LY9 106 aa6.04□□□□□ -1.44
Sqstm1-205ENSMUST00000143379 Krtap7-1Q9D3I6 87 aa6.01□□□□□ -1.45
Sqstm1-205ENSMUST00000143379 Gm3646F6S692 53 aa5.98□□□□□ -1.45
Sqstm1-205ENSMUST00000143379 Gm3880A0A1B0GSB3 72 aa5.95□□□□□ -1.46
Sqstm1-205ENSMUST00000143379 Mt1P02802 61 aaKnown RBP5.9□□□□□ -1.46
Sqstm1-205ENSMUST00000143379 Sprr2fO70557 76 aa5.89□□□□□ -1.47
Sqstm1-205ENSMUST00000143379 Gm11938Q9D3H4 131 aa5.88□□□□□ -1.47
Sqstm1-205ENSMUST00000143379 AhnakE9Q616 5656 aaKnown RBP5.88□□□□□ -1.47
Sqstm1-205ENSMUST00000143379 Gm12216A0A1W2P827 62 aa5.75□□□□□ -1.49
Sqstm1-205ENSMUST00000143379 Romo1P60603 79 aa5.62□□□□□ -1.51
Sqstm1-205ENSMUST00000143379 Mt3P28184 68 aa5.49□□□□□ -1.53
Sqstm1-205ENSMUST00000143379 Lce3cQ91V05 98 aa5.46□□□□□ -1.54
Sqstm1-205ENSMUST00000143379 Lce3dE9Q8V1 98 aa5.37□□□□□ -1.55
Sqstm1-205ENSMUST00000143379 Tnp1P10856 55 aa5.35□□□□□ -1.55
Sqstm1-205ENSMUST00000143379 ObscnA2AAJ9 8891 aaKnown RBP5.29□□□□□ -1.56
Sqstm1-205ENSMUST00000143379 A0A1Y7VLE6 161 aa5.27□□□□□ -1.57
Sqstm1-205ENSMUST00000143379 Gm40193A0A1B0GT39 78 aa5.26□□□□□ -1.57
Sqstm1-205ENSMUST00000143379 Lce3eF8VQJ0 98 aa5.18□□□□□ -1.58
Sqstm1-205ENSMUST00000143379 Lce3fQ6PAI4 98 aa5.18□□□□□ -1.58
Sqstm1-205ENSMUST00000143379 Gm10100J3QK64 120 aa5.15□□□□□ -1.59
Sqstm1-205ENSMUST00000143379 Mp68P56379 58 aa5.09□□□□□ -1.59
Sqstm1-205ENSMUST00000143379 4933428G20RikQ9D3X4 101 aa4.97□□□□□ -1.61
Sqstm1-205ENSMUST00000143379 Lce3aQ497I5 98 aa4.95□□□□□ -1.62
Sqstm1-205ENSMUST00000143379 Sprr2eO70556 76 aa4.81□□□□□ -1.64
Sqstm1-205ENSMUST00000143379 Sprr2dO70555 85 aa4.77□□□□□ -1.65
Sqstm1-205ENSMUST00000143379 Muc16A0A140LJ72 8478 aa4.74□□□□□ -1.65
Sqstm1-205ENSMUST00000143379 Sprr2hO70559 108 aa4.72□□□□□ -1.65
Sqstm1-205ENSMUST00000143379 A0A1Y7VJ07 166 aa4.64□□□□□ -1.67
Sqstm1-205ENSMUST00000143379 Gm20538F6Z9R1 75 aa4.63□□□□□ -1.67
Sqstm1-205ENSMUST00000143379 Gm10024A0A0A0MQA4 119 aa4.57□□□□□ -1.68
Sqstm1-205ENSMUST00000143379 Gm29735A0A1B0GT06 219 aa4.51□□□□□ -1.69
Sqstm1-205ENSMUST00000143379 Ndufaf8A2AMZ4 74 aa4.36□□□□□ -1.71
Sqstm1-205ENSMUST00000143379 Gm11567Q9D141 195 aa4.29□□□□□ -1.72
Sqstm1-205ENSMUST00000143379 Gm10142J3KMP7 120 aa4.22□□□□□ -1.73
Sqstm1-205ENSMUST00000143379 A030003K21RikA0A1Y7VIM3 128 aa4.2□□□□□ -1.74
Sqstm1-205ENSMUST00000143379 1110025L11RikO09048 78 aa4.05□□□□□ -1.76
Sqstm1-205ENSMUST00000143379 Krtap6-5Q925H3 78 aa4.05□□□□□ -1.76
Sqstm1-205ENSMUST00000143379 Krtap28-10A0A1Y7VP58 119 aa4.02□□□□□ -1.77
Sqstm1-205ENSMUST00000143379 Krtap5-1Q64507 230 aa3.88□□□□□ -1.79
Sqstm1-205ENSMUST00000143379 Krtap28-13A0A087WQP5 138 aa3.87□□□□□ -1.79
Sqstm1-205ENSMUST00000143379 A030005K14RikA0A1Y7VNY1 122 aa3.82□□□□□ -1.8
Sqstm1-205ENSMUST00000143379 Gm9112A2AI92 75 aa3.8□□□□□ -1.8
Sqstm1-205ENSMUST00000143379 Krtap31-2Q8CAY5 177 aa3.79□□□□□ -1.8
Sqstm1-205ENSMUST00000143379 Gm10229O08631 77 aa3.65□□□□□ -1.83
Sqstm1-205ENSMUST00000143379 Sprr2bO70554 98 aa3.65□□□□□ -1.83
Sqstm1-205ENSMUST00000143379 Krtap31-1Q9D644 177 aa3.61□□□□□ -1.83
Sqstm1-205ENSMUST00000143379 Gm7544A0A1Y7VJ58 118 aa3.46□□□□□ -1.86
Sqstm1-205ENSMUST00000143379 A030014E15RikA0A1Y7VJV2 120 aa3.44□□□□□ -1.86
Sqstm1-205ENSMUST00000143379 Krtap6-2O08884 159 aa3.38□□□□□ -1.87
Sqstm1-205ENSMUST00000143379 Krtap21-1Q925H4 128 aa3.27□□□□□ -1.89
Sqstm1-205ENSMUST00000143379 Gm6217A0A1Y7VJK9 128 aa3.19□□□□□ -1.9
Sqstm1-205ENSMUST00000143379 A0A286YCP9 139 aa3.17□□□□□ -1.9
Sqstm1-205ENSMUST00000143379 Gm4559A4IF42 199 aa2.67□□□□□ -1.98
Sqstm1-205ENSMUST00000143379 Phgr1Q8K0G7 91 aa2.63□□□□□ -1.99
Retrieved 80 of 22,080 RNA–protein pairs in 30.7 ms