RNA–Protein interactions for RNA: ENSMUST00000113686.7

Tpm1-206, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 998 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-206ENSMUST00000113686 Krtap7-1Q9D3I6 87 aa7.12□□□□□ -1.27
Tpm1-206ENSMUST00000113686 Gm10272F7CZ33 110 aa7.1□□□□□ -1.27
Tpm1-206ENSMUST00000113686 H2al1kJ3QP08 105 aa7.08□□□□□ -1.28
Tpm1-206ENSMUST00000113686 H2al1mQ9DAD9 105 aa7.06□□□□□ -1.28
Tpm1-206ENSMUST00000113686 Gm2431E9Q8S1 172 aa7.04□□□□□ -1.28
Tpm1-206ENSMUST00000113686 Rps28P62858 69 aaKnown RBP7.02□□□□□ -1.29
Tpm1-206ENSMUST00000113686 Muc19Q6PZE0 7524 aa7□□□□□ -1.29
Tpm1-206ENSMUST00000113686 Gpr98Q8VHN7 6298 aaKnown RBP6.98□□□□□ -1.29
Tpm1-206ENSMUST00000113686 Gm45337A0A1B0GS71 263 aa6.93□□□□□ -1.3
Tpm1-206ENSMUST00000113686 Lce1fB9EJP6 147 aa6.9□□□□□ -1.3
Tpm1-206ENSMUST00000113686 Lce1cQ9D1C5 147 aa6.9□□□□□ -1.3
Tpm1-206ENSMUST00000113686 Gm12216A0A1W2P827 62 aa6.84□□□□□ -1.31
Tpm1-206ENSMUST00000113686 Gm10153A0A1B0GRL1 320 aa6.76□□□□□ -1.33
Tpm1-206ENSMUST00000113686 Hmcn1D3YXG0 5634 aa6.76□□□□□ -1.33
Tpm1-206ENSMUST00000113686 Romo1P60603 79 aa6.71□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Ndufs5Q99LY9 106 aa6.71□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Gm11938Q9D3H4 131 aa6.69□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Gm40460A0A1B0GR10 244 aa6.68□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Gm7579A0A1B0GRJ4 243 aa6.68□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Krtap5-5Q2TA51 241 aa6.68□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Krtap5-4Q62220 223 aa6.68□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Mt1P02802 61 aaKnown RBP6.66□□□□□ -1.34
Tpm1-206ENSMUST00000113686 Krtap19-4Q925H7 84 aa6.63□□□□□ -1.35
Tpm1-206ENSMUST00000113686 4933415A04RikQ9D443 101 aa6.63□□□□□ -1.35
Tpm1-206ENSMUST00000113686 Gm39115A0A1B0GSH7 232 aa6.6□□□□□ -1.35
Tpm1-206ENSMUST00000113686 DstQ91ZU6 7393 aaKnown RBP6.53□□□□□ -1.36
Tpm1-206ENSMUST00000113686 Sox16Q62247 57 aa6.49□□□□□ -1.37
Tpm1-206ENSMUST00000113686 Tnp1P10856 55 aa6.46□□□□□ -1.38
Tpm1-206ENSMUST00000113686 NebE9Q1W3 7152 aa6.43□□□□□ -1.38
Tpm1-206ENSMUST00000113686 Lce3cQ91V05 98 aa6.38□□□□□ -1.39
Tpm1-206ENSMUST00000113686 Gm3646F6S692 53 aa6.37□□□□□ -1.39
Tpm1-206ENSMUST00000113686 Krtap4-16Q91W93 202 aa6.29□□□□□ -1.4
Tpm1-206ENSMUST00000113686 Lce3dE9Q8V1 98 aa6.28□□□□□ -1.4
Tpm1-206ENSMUST00000113686 Gm45618A0A1B0GSA0 219 aa6.21□□□□□ -1.42
Tpm1-206ENSMUST00000113686 Gm40193A0A1B0GT39 78 aa6.17□□□□□ -1.42
Tpm1-206ENSMUST00000113686 Mt3P28184 68 aa6.16□□□□□ -1.42
Tpm1-206ENSMUST00000113686 AhnakE9Q616 5656 aaKnown RBP6.1□□□□□ -1.43
Tpm1-206ENSMUST00000113686 Lce3eF8VQJ0 98 aa6.07□□□□□ -1.44
Tpm1-206ENSMUST00000113686 Lce3fQ6PAI4 98 aa6.07□□□□□ -1.44
Tpm1-206ENSMUST00000113686 Sprr2fO70557 76 aa6.03□□□□□ -1.44
Tpm1-206ENSMUST00000113686 ObscnA2AAJ9 8891 aaKnown RBP5.98□□□□□ -1.45
Tpm1-206ENSMUST00000113686 A0A1Y7VLE6 161 aa5.91□□□□□ -1.46
Tpm1-206ENSMUST00000113686 Gm10100J3QK64 120 aa5.84□□□□□ -1.47
Tpm1-206ENSMUST00000113686 4933428G20RikQ9D3X4 101 aa5.81□□□□□ -1.48
Tpm1-206ENSMUST00000113686 Lce3aQ497I5 98 aa5.8□□□□□ -1.48
Tpm1-206ENSMUST00000113686 Sprr2dO70555 85 aa5.75□□□□□ -1.49
Tpm1-206ENSMUST00000113686 Gm10337F7DEP7 55 aa5.7□□□□□ -1.5
Tpm1-206ENSMUST00000113686 Pcp4P63054 62 aa5.43□□□□□ -1.54
Tpm1-206ENSMUST00000113686 Krtap31-2Q8CAY5 177 aa5.43□□□□□ -1.54
Tpm1-206ENSMUST00000113686 Sprr2eO70556 76 aa5.37□□□□□ -1.55
Tpm1-206ENSMUST00000113686 Gm10024A0A0A0MQA4 119 aa5.27□□□□□ -1.57
Tpm1-206ENSMUST00000113686 Mp68P56379 58 aa5.2□□□□□ -1.58
Tpm1-206ENSMUST00000113686 Krtap31-1Q9D644 177 aa5.15□□□□□ -1.59
Tpm1-206ENSMUST00000113686 Krtap28-13A0A087WQP5 138 aa5.1□□□□□ -1.59
Tpm1-206ENSMUST00000113686 A030005K14RikA0A1Y7VNY1 122 aa5.05□□□□□ -1.6
Tpm1-206ENSMUST00000113686 A0A1Y7VJ07 166 aa5.04□□□□□ -1.6
Tpm1-206ENSMUST00000113686 Gm10142J3KMP7 120 aa5.04□□□□□ -1.6
Tpm1-206ENSMUST00000113686 Gm20538F6Z9R1 75 aa5.03□□□□□ -1.6
Tpm1-206ENSMUST00000113686 Krtap28-10A0A1Y7VP58 119 aa4.98□□□□□ -1.61
Tpm1-206ENSMUST00000113686 Muc16A0A140LJ72 8478 aa4.96□□□□□ -1.62
Tpm1-206ENSMUST00000113686 Sprr2hO70559 108 aa4.94□□□□□ -1.62
Tpm1-206ENSMUST00000113686 Gm29735A0A1B0GT06 219 aa4.91□□□□□ -1.62
Tpm1-206ENSMUST00000113686 SvipQ3UZP4 77 aa4.76□□□□□ -1.65
Tpm1-206ENSMUST00000113686 1110025L11RikO09048 78 aa4.75□□□□□ -1.65
Tpm1-206ENSMUST00000113686 Krtap6-5Q925H3 78 aa4.75□□□□□ -1.65
Tpm1-206ENSMUST00000113686 A030014E15RikA0A1Y7VJV2 120 aa4.71□□□□□ -1.66
Tpm1-206ENSMUST00000113686 Gm11567Q9D141 195 aa4.6□□□□□ -1.67
Tpm1-206ENSMUST00000113686 Gm7544A0A1Y7VJ58 118 aa4.5□□□□□ -1.69
Tpm1-206ENSMUST00000113686 Gm10229O08631 77 aa4.26□□□□□ -1.73
Tpm1-206ENSMUST00000113686 A030003K21RikA0A1Y7VIM3 128 aa4.13□□□□□ -1.75
Tpm1-206ENSMUST00000113686 Krtap5-1Q64507 230 aa3.87□□□□□ -1.79
Tpm1-206ENSMUST00000113686 Krtap6-2O08884 159 aa3.83□□□□□ -1.8
Tpm1-206ENSMUST00000113686 Krtap21-1Q925H4 128 aa3.83□□□□□ -1.8
Tpm1-206ENSMUST00000113686 A0A286YCP9 139 aa3.79□□□□□ -1.8
Tpm1-206ENSMUST00000113686 Sprr2bO70554 98 aa3.77□□□□□ -1.81
Tpm1-206ENSMUST00000113686 Ndufaf8A2AMZ4 74 aa3.45□□□□□ -1.86
Tpm1-206ENSMUST00000113686 Gm6217A0A1Y7VJK9 128 aa3.36□□□□□ -1.87
Tpm1-206ENSMUST00000113686 Phgr1Q8K0G7 91 aa3.05□□□□□ -1.92
Tpm1-206ENSMUST00000113686 Gm4559A4IF42 199 aa2.85□□□□□ -1.95
Tpm1-206ENSMUST00000113686 Gm9112A2AI92 75 aa2.58□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 101.4 ms