RNA–Protein interactions for RNA: ENSMUST00000112456.8

Sh3kbp1-206, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3kbp1, Length 7,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-206ENSMUST00000112456 Ryr3A2AGL3 4863 aa3.7□□□□□ -1.82
Sh3kbp1-206ENSMUST00000112456 Lce1kJ3QP15 125 aa3.68□□□□□ -1.82
Sh3kbp1-206ENSMUST00000112456 Sprr2bO70554 98 aa3.68□□□□□ -1.82
Sh3kbp1-206ENSMUST00000112456 Krtap4-16Q91W93 202 aa3.63□□□□□ -1.83
Sh3kbp1-206ENSMUST00000112456 Herc2Q4U2R1 4836 aa3.6□□□□□ -1.83
Sh3kbp1-206ENSMUST00000112456 A0A1Y7VLE6 161 aa3.54□□□□□ -1.84
Sh3kbp1-206ENSMUST00000112456 Syne2Q6ZWQ0 6874 aaKnown RBP3.53□□□□□ -1.84
Sh3kbp1-206ENSMUST00000112456 Gm11938Q9D3H4 131 aa3.53□□□□□ -1.84
Sh3kbp1-206ENSMUST00000112456 Gm11554B1AQB2 190 aa3.52□□□□□ -1.85
Sh3kbp1-206ENSMUST00000112456 PcloQ9QYX7 5068 aa3.51□□□□□ -1.85
Sh3kbp1-206ENSMUST00000112456 Mt3P28184 68 aa3.5□□□□□ -1.85
Sh3kbp1-206ENSMUST00000112456 HydinQ80W93 5154 aa3.45□□□□□ -1.86
Sh3kbp1-206ENSMUST00000112456 Fsip2A2ARZ3 6995 aa3.44□□□□□ -1.86
Sh3kbp1-206ENSMUST00000112456 Ryr2E9Q401 4966 aaKnown RBP3.4□□□□□ -1.87
Sh3kbp1-206ENSMUST00000112456 Syne1Q6ZWR6 8799 aa3.36□□□□□ -1.87
Sh3kbp1-206ENSMUST00000112456 Birc6O88738 4882 aa3.32□□□□□ -1.88
Sh3kbp1-206ENSMUST00000112456 Krtap20-2E9Q0A8 60 aa3.31□□□□□ -1.88
Sh3kbp1-206ENSMUST00000112456 Eppk1Q8R0W0 6548 aa3.31□□□□□ -1.88
Sh3kbp1-206ENSMUST00000112456 Krtap31-2Q8CAY5 177 aa3.31□□□□□ -1.88
Sh3kbp1-206ENSMUST00000112456 Mdn1A2ANY6 5589 aaKnown RBP3.3□□□□□ -1.88
Sh3kbp1-206ENSMUST00000112456 Herc1E9PZP8 4859 aa3.28□□□□□ -1.88
Sh3kbp1-206ENSMUST00000112456 Kiaa1109A2AAE1 5005 aa3.26□□□□□ -1.89
Sh3kbp1-206ENSMUST00000112456 A030003K21RikA0A1Y7VIM3 128 aa3.25□□□□□ -1.89
Sh3kbp1-206ENSMUST00000112456 Hmcn2A2AJ76 5100 aa3.21□□□□□ -1.9
Sh3kbp1-206ENSMUST00000112456 Gm11555B1AQ89 175 aa3.12□□□□□ -1.91
Sh3kbp1-206ENSMUST00000112456 ZanO88799 5376 aa3.09□□□□□ -1.91
Sh3kbp1-206ENSMUST00000112456 Ubr4A2AN08 5180 aa3.09□□□□□ -1.92
Sh3kbp1-206ENSMUST00000112456 Krtap28-10A0A1Y7VP58 119 aa3.08□□□□□ -1.92
Sh3kbp1-206ENSMUST00000112456 Abca13Q5SSE9 5034 aa3.07□□□□□ -1.92
Sh3kbp1-206ENSMUST00000112456 Muc5bE9Q5I3 4800 aa3.06□□□□□ -1.92
Sh3kbp1-206ENSMUST00000112456 Gm6217A0A1Y7VJK9 128 aa3.05□□□□□ -1.92
Sh3kbp1-206ENSMUST00000112456 A0A1Y7VJH8 109 aa3.04□□□□□ -1.92
Sh3kbp1-206ENSMUST00000112456 Mt1P02802 61 aaKnown RBP3.02□□□□□ -1.93
Sh3kbp1-206ENSMUST00000112456 Krtap28-13A0A087WQP5 138 aa3.01□□□□□ -1.93
Sh3kbp1-206ENSMUST00000112456 A0A1Y7VJ07 166 aa2.99□□□□□ -1.93
Sh3kbp1-206ENSMUST00000112456 4932415D10RikA0A1W2P6U8 4986 aa2.96□□□□□ -1.93
Sh3kbp1-206ENSMUST00000112456 A030005K14RikA0A1Y7VNY1 122 aa2.96□□□□□ -1.94
Sh3kbp1-206ENSMUST00000112456 Fat4Q2PZL6 4981 aa2.94□□□□□ -1.94
Sh3kbp1-206ENSMUST00000112456 Gm7544A0A1Y7VJ58 118 aa2.85□□□□□ -1.95
Sh3kbp1-206ENSMUST00000112456 A030005L19RikA0A1Y7VIU2 113 aa2.83□□□□□ -1.96
Sh3kbp1-206ENSMUST00000112456 A030014E15RikA0A1Y7VJV2 120 aa2.77□□□□□ -1.97
Sh3kbp1-206ENSMUST00000112456 Muc16A0A140LJ72 8478 aa2.73□□□□□ -1.97
Sh3kbp1-206ENSMUST00000112456 Rnf213E9Q555 5152 aaKnown RBP2.73□□□□□ -1.97
Sh3kbp1-206ENSMUST00000112456 ObscnA2AAJ9 8891 aaKnown RBP2.68□□□□□ -1.98
Sh3kbp1-206ENSMUST00000112456 Ush2AQ2QI47 5193 aa2.67□□□□□ -1.98
Sh3kbp1-206ENSMUST00000112456 A0A286YCP9 139 aa2.62□□□□□ -1.99
Sh3kbp1-206ENSMUST00000112456 SspoQ8CG65 4998 aa2.6□□□□□ -1.99
Sh3kbp1-206ENSMUST00000112456 NebE9Q1W3 7152 aa2.54□□□□□ -2
Sh3kbp1-206ENSMUST00000112456 Gm11559Q9D3H7 191 aa2.54□□□□□ -2
Sh3kbp1-206ENSMUST00000112456 1110025L11RikO09048 78 aa2.5□□□□□ -2.01
Sh3kbp1-206ENSMUST00000112456 Krtap6-5Q925H3 78 aa2.5□□□□□ -2.01
Sh3kbp1-206ENSMUST00000112456 Macf1Q9QXZ0 7354 aaKnown RBP2.49□□□□□ -2.01
Sh3kbp1-206ENSMUST00000112456 Gm10229O08631 77 aa2.47□□□□□ -2.01
Sh3kbp1-206ENSMUST00000112456 Phgr1Q8K0G7 91 aa2.46□□□□□ -2.02
Sh3kbp1-206ENSMUST00000112456 DstQ91ZU6 7393 aaKnown RBP2.45□□□□□ -2.02
Sh3kbp1-206ENSMUST00000112456 Muc19Q6PZE0 7524 aa2.45□□□□□ -2.02
Sh3kbp1-206ENSMUST00000112456 Gpr98Q8VHN7 6298 aaKnown RBP2.34□□□□□ -2.03
Sh3kbp1-206ENSMUST00000112456 Krtap9-1Q64526 186 aa2.29□□□□□ -2.04
Sh3kbp1-206ENSMUST00000112456 Gm11568A2A4M2 211 aa2.19□□□□□ -2.06
Sh3kbp1-206ENSMUST00000112456 Kmt2dQ6PDK2 5588 aa2.1□□□□□ -2.07
Sh3kbp1-206ENSMUST00000112456 Gm11567Q9D141 195 aa1.97□□□□□ -2.09
Sh3kbp1-206ENSMUST00000112456 Gm2431E9Q8S1 172 aa1.94□□□□□ -2.1
Sh3kbp1-206ENSMUST00000112456 Krtap6-2O08884 159 aa1.93□□□□□ -2.1
Sh3kbp1-206ENSMUST00000112456 Gm11639A0A1D5RLM8 5808 aa1.92□□□□□ -2.1
Sh3kbp1-206ENSMUST00000112456 Gm7579A0A1B0GRJ4 243 aa1.82□□□□□ -2.12
Sh3kbp1-206ENSMUST00000112456 Hmcn1D3YXG0 5634 aa1.79□□□□□ -2.12
Sh3kbp1-206ENSMUST00000112456 Gm45618A0A1B0GSA0 219 aa1.74□□□□□ -2.13
Sh3kbp1-206ENSMUST00000112456 Gm4553A0A1B0GSA9 284 aa1.74□□□□□ -2.13
Sh3kbp1-206ENSMUST00000112456 Krtap5-4Q62220 223 aa1.72□□□□□ -2.13
Sh3kbp1-206ENSMUST00000112456 Krtap5-2Q9D5Z7 189 aa1.68□□□□□ -2.14
Sh3kbp1-206ENSMUST00000112456 Krtap21-1Q925H4 128 aa1.67□□□□□ -2.14
Sh3kbp1-206ENSMUST00000112456 AhnakE9Q616 5656 aaKnown RBP1.49□□□□□ -2.17
Sh3kbp1-206ENSMUST00000112456 Gm39115A0A1B0GSH7 232 aa1.37□□□□□ -2.19
Sh3kbp1-206ENSMUST00000112456 Krtap5-1Q64507 230 aa1.36□□□□□ -2.19
Sh3kbp1-206ENSMUST00000112456 Gm10153A0A1B0GRL1 320 aa1.29□□□□□ -2.2
Sh3kbp1-206ENSMUST00000112456 Gm45337A0A1B0GS71 263 aa1.28□□□□□ -2.2
Sh3kbp1-206ENSMUST00000112456 Krtap5-5Q2TA51 241 aa1.19□□□□□ -2.22
Sh3kbp1-206ENSMUST00000112456 Gm40460A0A1B0GR10 244 aa1.19□□□□□ -2.22
Sh3kbp1-206ENSMUST00000112456 Gm29735A0A1B0GT06 219 aa1.13□□□□□ -2.23
Sh3kbp1-206ENSMUST00000112456 Gm4559A4IF42 199 aa0.91□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 85.3 ms