RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Lrp2A2ARV4 4660 aa1.81□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Ryr3A2AGL3 4863 aa1.8□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 2300003K06RikA2A4M0 262 aa1.8□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Lce1a1Q9CQH5 143 aa1.79□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Lce1a2Q9D1K4 149 aa1.79□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Gm11564A2A4L9 201 aa1.79□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Gm11563B1AQ90 168 aa1.79□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Gm11595B1AQA7 289 aa1.79□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Krtap4-8B1AQA8 209 aa1.79□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 ZanO88799 5376 aa1.78□□□□□ -2.12
Trp53bp1-201ENSMUST00000110647 Krtap17-1A2A5X6 109 aa1.77□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Mt1P02802 61 aaKnown RBP1.77□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Krtap6-3A0A087WQL6 57 aa1.77□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Krtap4-9B1AQA9 244 aa1.77□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Muc5bE9Q5I3 4800 aa1.76□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 A030005K14RikA0A1Y7VNY1 122 aa1.75□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Eppk1Q8R0W0 6548 aa1.75□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Birc6O88738 4882 aa1.75□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Herc1E9PZP8 4859 aa1.75□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Kmt2cQ8BRH4 4903 aa1.74□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Krtap4-13Q9D7P3 165 aa1.74□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 Lce1kJ3QP15 125 aa1.74□□□□□ -2.13
Trp53bp1-201ENSMUST00000110647 A0A1Y7VJ07 166 aa1.71□□□□□ -2.14
Trp53bp1-201ENSMUST00000110647 Kiaa1109A2AAE1 5005 aa1.7□□□□□ -2.14
Trp53bp1-201ENSMUST00000110647 HydinQ80W93 5154 aa1.7□□□□□ -2.14
Trp53bp1-201ENSMUST00000110647 Fsip2A2ARZ3 6995 aa1.68□□□□□ -2.14
Trp53bp1-201ENSMUST00000110647 Abca13Q5SSE9 5034 aa1.66□□□□□ -2.14
Trp53bp1-201ENSMUST00000110647 ObscnA2AAJ9 8891 aaKnown RBP1.65□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 Krtap28-13A0A087WQP5 138 aa1.64□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 A030005L19RikA0A1Y7VIU2 113 aa1.63□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 Syne1Q6ZWR6 8799 aa1.63□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 Ubr4A2AN08 5180 aa1.62□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 Gm7544A0A1Y7VJ58 118 aa1.61□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 A0A1Y7VJH8 109 aa1.6□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 Hmcn2A2AJ76 5100 aa1.59□□□□□ -2.15
Trp53bp1-201ENSMUST00000110647 Gm11554B1AQB2 190 aa1.58□□□□□ -2.16
Trp53bp1-201ENSMUST00000110647 Krtap20-2E9Q0A8 60 aa1.57□□□□□ -2.16
Trp53bp1-201ENSMUST00000110647 Krtap4-16Q91W93 202 aa1.56□□□□□ -2.16
Trp53bp1-201ENSMUST00000110647 Ush2AQ2QI47 5193 aa1.53□□□□□ -2.17
Trp53bp1-201ENSMUST00000110647 4932415D10RikA0A1W2P6U8 4986 aa1.52□□□□□ -2.17
Trp53bp1-201ENSMUST00000110647 Gpr98Q8VHN7 6298 aaKnown RBP1.49□□□□□ -2.17
Trp53bp1-201ENSMUST00000110647 Rnf213E9Q555 5152 aaKnown RBP1.49□□□□□ -2.17
Trp53bp1-201ENSMUST00000110647 A030014E15RikA0A1Y7VJV2 120 aa1.47□□□□□ -2.17
Trp53bp1-201ENSMUST00000110647 Fat4Q2PZL6 4981 aa1.47□□□□□ -2.17
Trp53bp1-201ENSMUST00000110647 DstQ91ZU6 7393 aaKnown RBP1.42□□□□□ -2.18
Trp53bp1-201ENSMUST00000110647 Gm11639A0A1D5RLM8 5808 aa1.41□□□□□ -2.18
Trp53bp1-201ENSMUST00000110647 SspoQ8CG65 4998 aa1.4□□□□□ -2.18
Trp53bp1-201ENSMUST00000110647 Macf1Q9QXZ0 7354 aaKnown RBP1.4□□□□□ -2.19
Trp53bp1-201ENSMUST00000110647 1110025L11RikO09048 78 aa1.39□□□□□ -2.19
Trp53bp1-201ENSMUST00000110647 Krtap6-5Q925H3 78 aa1.39□□□□□ -2.19
Trp53bp1-201ENSMUST00000110647 NebE9Q1W3 7152 aa1.37□□□□□ -2.19
Trp53bp1-201ENSMUST00000110647 Gm10229O08631 77 aa1.36□□□□□ -2.19
Trp53bp1-201ENSMUST00000110647 A0A286YCP9 139 aa1.3□□□□□ -2.2
Trp53bp1-201ENSMUST00000110647 Muc16A0A140LJ72 8478 aa1.29□□□□□ -2.2
Trp53bp1-201ENSMUST00000110647 Kmt2dQ6PDK2 5588 aa1.28□□□□□ -2.2
Trp53bp1-201ENSMUST00000110647 Gm11555B1AQ89 175 aa1.28□□□□□ -2.21
Trp53bp1-201ENSMUST00000110647 Phgr1Q8K0G7 91 aa1.27□□□□□ -2.21
Trp53bp1-201ENSMUST00000110647 Gm11559Q9D3H7 191 aa1.2□□□□□ -2.22
Trp53bp1-201ENSMUST00000110647 Gm11567Q9D141 195 aa1.17□□□□□ -2.22
Trp53bp1-201ENSMUST00000110647 Krtap9-1Q64526 186 aa1.15□□□□□ -2.22
Trp53bp1-201ENSMUST00000110647 Gm11568A2A4M2 211 aa1.13□□□□□ -2.23
Trp53bp1-201ENSMUST00000110647 Hmcn1D3YXG0 5634 aa1.11□□□□□ -2.23
Trp53bp1-201ENSMUST00000110647 Muc19Q6PZE0 7524 aa1.11□□□□□ -2.23
Trp53bp1-201ENSMUST00000110647 Krtap6-2O08884 159 aa1.07□□□□□ -2.24
Trp53bp1-201ENSMUST00000110647 AhnakE9Q616 5656 aaKnown RBP1.05□□□□□ -2.24
Trp53bp1-201ENSMUST00000110647 Krtap5-2Q9D5Z7 189 aa1.02□□□□□ -2.25
Trp53bp1-201ENSMUST00000110647 Gm4553A0A1B0GSA9 284 aa0.97□□□□□ -2.25
Trp53bp1-201ENSMUST00000110647 Krtap21-1Q925H4 128 aa0.9□□□□□ -2.26
Trp53bp1-201ENSMUST00000110647 Gm40460A0A1B0GR10 244 aa0.88□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Gm7579A0A1B0GRJ4 243 aa0.88□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Gm45337A0A1B0GS71 263 aa0.88□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Krtap5-5Q2TA51 241 aa0.88□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Krtap5-4Q62220 223 aa0.88□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Gm45618A0A1B0GSA0 219 aa0.88□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Gm39115A0A1B0GSH7 232 aa0.84□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Gm2431E9Q8S1 172 aa0.84□□□□□ -2.27
Trp53bp1-201ENSMUST00000110647 Gm10153A0A1B0GRL1 320 aa0.79□□□□□ -2.28
Trp53bp1-201ENSMUST00000110647 Gm29735A0A1B0GT06 219 aa0.65□□□□□ -2.3
Trp53bp1-201ENSMUST00000110647 Krtap5-1Q64507 230 aa0.55□□□□□ -2.32
Trp53bp1-201ENSMUST00000110647 Gm4559A4IF42 199 aa0.41□□□□□ -2.34
Retrieved 80 of 22,080 RNA–protein pairs in 1572 ms