RNA–Protein interactions for RNA: ENSMUST00000100237.3

Ttf1-201, Transcript of Transcription termination factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ttf1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttf1-201ENSMUST00000100237 Krtap4-6Q3V4B7 195 aa2.81□□□□□ -1.96
Ttf1-201ENSMUST00000100237 Krtap1-3A2A588 173 aa2.8□□□□□ -1.96
Ttf1-201ENSMUST00000100237 A030003K21RikA0A1Y7VIM3 128 aa2.79□□□□□ -1.96
Ttf1-201ENSMUST00000100237 Gm6217A0A1Y7VJK9 128 aa2.78□□□□□ -1.96
Ttf1-201ENSMUST00000100237 Herc1E9PZP8 4859 aa2.78□□□□□ -1.96
Ttf1-201ENSMUST00000100237 Krtap19-9bQ99NG9 58 aa2.78□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Krtap16-3Q8C1I6 86 aa2.77□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Syne2Q6ZWQ0 6874 aaKnown RBP2.76□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Krtap19-3Q925H6 87 aa2.74□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Mt4P47945 62 aa2.72□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Krtap9-3Q3V2C1 136 aa2.72□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Gm39115A0A1B0GSH7 232 aa2.72□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Krtap19-1Q925H2 87 aa2.72□□□□□ -1.97
Ttf1-201ENSMUST00000100237 Fsip2A2ARZ3 6995 aa2.7□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Gm11564A2A4L9 201 aa2.67□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Krtap4-8B1AQA8 209 aa2.67□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Gm29735A0A1B0GT06 219 aa2.66□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Sprr2fO70557 76 aa2.66□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Syne1Q6ZWR6 8799 aa2.66□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Lce1a2Q9D1K4 149 aa2.65□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Lce1iQ9D6P5 149 aa2.65□□□□□ -1.98
Ttf1-201ENSMUST00000100237 Macf1Q9QXZ0 7354 aaKnown RBP2.64□□□□□ -1.99
Ttf1-201ENSMUST00000100237 Eppk1Q8R0W0 6548 aa2.64□□□□□ -1.99
Ttf1-201ENSMUST00000100237 Gm45618A0A1B0GSA0 219 aa2.64□□□□□ -1.99
Ttf1-201ENSMUST00000100237 Ush2AQ2QI47 5193 aa2.61□□□□□ -1.99
Ttf1-201ENSMUST00000100237 Fat4Q2PZL6 4981 aa2.6□□□□□ -1.99
Ttf1-201ENSMUST00000100237 Sprr2iO70560 76 aa2.59□□□□□ -2
Ttf1-201ENSMUST00000100237 Muc5bE9Q5I3 4800 aa2.58□□□□□ -2
Ttf1-201ENSMUST00000100237 Krtap4-13Q9D7P3 165 aa2.57□□□□□ -2
Ttf1-201ENSMUST00000100237 Krtap6-3A0A087WQL6 57 aa2.55□□□□□ -2
Ttf1-201ENSMUST00000100237 Krtap22-2J3QNX6 67 aa2.55□□□□□ -2
Ttf1-201ENSMUST00000100237 Krtap19-2Q925I0 141 aa2.53□□□□□ -2
Ttf1-201ENSMUST00000100237 ZanO88799 5376 aa2.53□□□□□ -2.01
Ttf1-201ENSMUST00000100237 Lce3bQ9CQM7 98 aa2.52□□□□□ -2.01
Ttf1-201ENSMUST00000100237 DstQ91ZU6 7393 aaKnown RBP2.52□□□□□ -2.01
Ttf1-201ENSMUST00000100237 Mt2P02798 61 aa2.5□□□□□ -2.01
Ttf1-201ENSMUST00000100237 Hmcn2A2AJ76 5100 aa2.5□□□□□ -2.01
Ttf1-201ENSMUST00000100237 SspoQ8CG65 4998 aa2.5□□□□□ -2.01
Ttf1-201ENSMUST00000100237 Muc16A0A140LJ72 8478 aa2.48□□□□□ -2.01
Ttf1-201ENSMUST00000100237 Gm10153A0A1B0GRL1 320 aa2.44□□□□□ -2.02
Ttf1-201ENSMUST00000100237 Gpr98Q8VHN7 6298 aaKnown RBP2.44□□□□□ -2.02
Ttf1-201ENSMUST00000100237 Lce3dE9Q8V1 98 aa2.42□□□□□ -2.02
Ttf1-201ENSMUST00000100237 Lce3aQ497I5 98 aa2.42□□□□□ -2.02
Ttf1-201ENSMUST00000100237 Lce3cQ91V05 98 aa2.4□□□□□ -2.02
Ttf1-201ENSMUST00000100237 Krtap19-4Q925H7 84 aa2.4□□□□□ -2.03
Ttf1-201ENSMUST00000100237 NebE9Q1W3 7152 aa2.39□□□□□ -2.03
Ttf1-201ENSMUST00000100237 Gm11568A2A4M2 211 aa2.34□□□□□ -2.04
Ttf1-201ENSMUST00000100237 Gm11938Q9D3H4 131 aa2.32□□□□□ -2.04
Ttf1-201ENSMUST00000100237 Sprr2eO70556 76 aa2.31□□□□□ -2.04
Ttf1-201ENSMUST00000100237 Krtap5-4Q62220 223 aa2.29□□□□□ -2.04
Ttf1-201ENSMUST00000100237 Lce3fQ6PAI4 98 aa2.29□□□□□ -2.04
Ttf1-201ENSMUST00000100237 Lce3eF8VQJ0 98 aa2.28□□□□□ -2.05
Ttf1-201ENSMUST00000100237 Krtap9-1Q64526 186 aa2.24□□□□□ -2.05
Ttf1-201ENSMUST00000100237 Krtap20-2E9Q0A8 60 aa2.22□□□□□ -2.05
Ttf1-201ENSMUST00000100237 Krtap4-16Q91W93 202 aa2.22□□□□□ -2.05
Ttf1-201ENSMUST00000100237 ObscnA2AAJ9 8891 aaKnown RBP2.2□□□□□ -2.06
Ttf1-201ENSMUST00000100237 Gm10024A0A0A0MQA4 119 aa2.19□□□□□ -2.06
Ttf1-201ENSMUST00000100237 Sprr2hO70559 108 aa2.19□□□□□ -2.06
Ttf1-201ENSMUST00000100237 Gm45337A0A1B0GS71 263 aa2.17□□□□□ -2.06
Ttf1-201ENSMUST00000100237 Gm11639A0A1D5RLM8 5808 aa2.17□□□□□ -2.06
Ttf1-201ENSMUST00000100237 Sprr2dO70555 85 aa2.16□□□□□ -2.06
Ttf1-201ENSMUST00000100237 Kmt2dQ6PDK2 5588 aa2.06□□□□□ -2.08
Ttf1-201ENSMUST00000100237 Gm7579A0A1B0GRJ4 243 aa1.95□□□□□ -2.1
Ttf1-201ENSMUST00000100237 Muc19Q6PZE0 7524 aa1.94□□□□□ -2.1
Ttf1-201ENSMUST00000100237 Sprr2bO70554 98 aa1.93□□□□□ -2.1
Ttf1-201ENSMUST00000100237 Gm4559A4IF42 199 aa1.89□□□□□ -2.11
Ttf1-201ENSMUST00000100237 Krtap5-1Q64507 230 aa1.87□□□□□ -2.11
Ttf1-201ENSMUST00000100237 Gm4553A0A1B0GSA9 284 aa1.85□□□□□ -2.11
Ttf1-201ENSMUST00000100237 Gm10229O08631 77 aa1.85□□□□□ -2.11
Ttf1-201ENSMUST00000100237 Krtap5-2Q9D5Z7 189 aa1.82□□□□□ -2.12
Ttf1-201ENSMUST00000100237 Hmcn1D3YXG0 5634 aa1.82□□□□□ -2.12
Ttf1-201ENSMUST00000100237 Mt1P02802 61 aaKnown RBP1.79□□□□□ -2.12
Ttf1-201ENSMUST00000100237 Krtap6-5Q925H3 78 aa1.76□□□□□ -2.13
Ttf1-201ENSMUST00000100237 AhnakE9Q616 5656 aaKnown RBP1.64□□□□□ -2.15
Ttf1-201ENSMUST00000100237 Gm40460A0A1B0GR10 244 aa1.56□□□□□ -2.16
Ttf1-201ENSMUST00000100237 Krtap5-5Q2TA51 241 aa1.56□□□□□ -2.16
Ttf1-201ENSMUST00000100237 Krtap6-2O08884 159 aa1.47□□□□□ -2.17
Ttf1-201ENSMUST00000100237 1110025L11RikO09048 78 aa1.45□□□□□ -2.18
Ttf1-201ENSMUST00000100237 Phgr1Q8K0G7 91 aa1.3□□□□□ -2.2
Ttf1-201ENSMUST00000100237 Krtap21-1Q925H4 128 aa1.25□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 93.8 ms