RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Lce1kJ3QP15 125 aa3.02□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Pkhd1l1Q80ZA4 4249 aa3.02□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Lce1a1Q9CQH5 143 aa3.01□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Lce1a2Q9D1K4 149 aa3.01□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Ryr3A2AGL3 4863 aa3□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Gm6217A0A1Y7VJK9 128 aa2.99□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Lrp2A2ARV4 4660 aa2.99□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Ryr2E9Q401 4966 aaKnown RBP2.97□□□□□ -1.93
Scn9a-201ENSMUST00000100063 Krtap6-3A0A087WQL6 57 aa2.94□□□□□ -1.94
Scn9a-201ENSMUST00000100063 Fat2Q5F226 4351 aa2.93□□□□□ -1.94
Scn9a-201ENSMUST00000100063 Kmt2cQ8BRH4 4903 aa2.93□□□□□ -1.94
Scn9a-201ENSMUST00000100063 Mdn1A2ANY6 5589 aaKnown RBP2.88□□□□□ -1.95
Scn9a-201ENSMUST00000100063 Muc5bE9Q5I3 4800 aa2.88□□□□□ -1.95
Scn9a-201ENSMUST00000100063 ZanO88799 5376 aa2.87□□□□□ -1.95
Scn9a-201ENSMUST00000100063 Krtap17-1A2A5X6 109 aa2.87□□□□□ -1.95
Scn9a-201ENSMUST00000100063 Gm11554B1AQB2 190 aa2.83□□□□□ -1.96
Scn9a-201ENSMUST00000100063 Herc1E9PZP8 4859 aa2.81□□□□□ -1.96
Scn9a-201ENSMUST00000100063 Syne2Q6ZWQ0 6874 aaKnown RBP2.8□□□□□ -1.96
Scn9a-201ENSMUST00000100063 Kiaa1109A2AAE1 5005 aa2.78□□□□□ -1.96
Scn9a-201ENSMUST00000100063 HydinQ80W93 5154 aa2.78□□□□□ -1.96
Scn9a-201ENSMUST00000100063 Krtap28-10A0A1Y7VP58 119 aa2.69□□□□□ -1.98
Scn9a-201ENSMUST00000100063 Fsip2A2ARZ3 6995 aa2.68□□□□□ -1.98
Scn9a-201ENSMUST00000100063 Krtap4-16Q91W93 202 aa2.68□□□□□ -1.98
Scn9a-201ENSMUST00000100063 A030005K14RikA0A1Y7VNY1 122 aa2.68□□□□□ -1.98
Scn9a-201ENSMUST00000100063 A0A1Y7VJH8 109 aa2.66□□□□□ -1.98
Scn9a-201ENSMUST00000100063 Mt1P02802 61 aaKnown RBP2.64□□□□□ -1.99
Scn9a-201ENSMUST00000100063 A0A1Y7VJ07 166 aa2.63□□□□□ -1.99
Scn9a-201ENSMUST00000100063 Syne1Q6ZWR6 8799 aa2.62□□□□□ -1.99
Scn9a-201ENSMUST00000100063 Birc6O88738 4882 aa2.61□□□□□ -1.99
Scn9a-201ENSMUST00000100063 Ubr4A2AN08 5180 aa2.6□□□□□ -1.99
Scn9a-201ENSMUST00000100063 4932415D10RikA0A1W2P6U8 4986 aa2.59□□□□□ -1.99
Scn9a-201ENSMUST00000100063 Krtap28-13A0A087WQP5 138 aa2.59□□□□□ -1.99
Scn9a-201ENSMUST00000100063 Krtap20-2E9Q0A8 60 aa2.57□□□□□ -2
Scn9a-201ENSMUST00000100063 Gm7544A0A1Y7VJ58 118 aa2.54□□□□□ -2
Scn9a-201ENSMUST00000100063 A030005L19RikA0A1Y7VIU2 113 aa2.51□□□□□ -2.01
Scn9a-201ENSMUST00000100063 Eppk1Q8R0W0 6548 aa2.5□□□□□ -2.01
Scn9a-201ENSMUST00000100063 Abca13Q5SSE9 5034 aa2.44□□□□□ -2.02
Scn9a-201ENSMUST00000100063 ObscnA2AAJ9 8891 aaKnown RBP2.43□□□□□ -2.02
Scn9a-201ENSMUST00000100063 Fat4Q2PZL6 4981 aa2.43□□□□□ -2.02
Scn9a-201ENSMUST00000100063 Rnf213E9Q555 5152 aaKnown RBP2.4□□□□□ -2.03
Scn9a-201ENSMUST00000100063 Hmcn2A2AJ76 5100 aa2.32□□□□□ -2.04
Scn9a-201ENSMUST00000100063 Gm11555B1AQ89 175 aa2.27□□□□□ -2.05
Scn9a-201ENSMUST00000100063 A030014E15RikA0A1Y7VJV2 120 aa2.25□□□□□ -2.05
Scn9a-201ENSMUST00000100063 SspoQ8CG65 4998 aa2.25□□□□□ -2.05
Scn9a-201ENSMUST00000100063 Ush2AQ2QI47 5193 aa2.23□□□□□ -2.05
Scn9a-201ENSMUST00000100063 1110025L11RikO09048 78 aa2.19□□□□□ -2.06
Scn9a-201ENSMUST00000100063 Krtap6-5Q925H3 78 aa2.19□□□□□ -2.06
Scn9a-201ENSMUST00000100063 Gm10229O08631 77 aa2.15□□□□□ -2.07
Scn9a-201ENSMUST00000100063 Macf1Q9QXZ0 7354 aaKnown RBP2.14□□□□□ -2.07
Scn9a-201ENSMUST00000100063 NebE9Q1W3 7152 aa2.13□□□□□ -2.07
Scn9a-201ENSMUST00000100063 DstQ91ZU6 7393 aaKnown RBP2.11□□□□□ -2.07
Scn9a-201ENSMUST00000100063 Phgr1Q8K0G7 91 aa2.03□□□□□ -2.08
Scn9a-201ENSMUST00000100063 Gm11559Q9D3H7 191 aa2.03□□□□□ -2.08
Scn9a-201ENSMUST00000100063 Gpr98Q8VHN7 6298 aaKnown RBP2.01□□□□□ -2.09
Scn9a-201ENSMUST00000100063 Kmt2dQ6PDK2 5588 aa1.99□□□□□ -2.09
Scn9a-201ENSMUST00000100063 Muc16A0A140LJ72 8478 aa1.96□□□□□ -2.1
Scn9a-201ENSMUST00000100063 A0A286YCP9 139 aa1.91□□□□□ -2.1
Scn9a-201ENSMUST00000100063 Gm11639A0A1D5RLM8 5808 aa1.85□□□□□ -2.11
Scn9a-201ENSMUST00000100063 Gm11568A2A4M2 211 aa1.82□□□□□ -2.12
Scn9a-201ENSMUST00000100063 Krtap9-1Q64526 186 aa1.82□□□□□ -2.12
Scn9a-201ENSMUST00000100063 Muc19Q6PZE0 7524 aa1.82□□□□□ -2.12
Scn9a-201ENSMUST00000100063 Krtap6-2O08884 159 aa1.7□□□□□ -2.14
Scn9a-201ENSMUST00000100063 Krtap5-2Q9D5Z7 189 aa1.61□□□□□ -2.15
Scn9a-201ENSMUST00000100063 Hmcn1D3YXG0 5634 aa1.55□□□□□ -2.16
Scn9a-201ENSMUST00000100063 Gm4553A0A1B0GSA9 284 aa1.53□□□□□ -2.16
Scn9a-201ENSMUST00000100063 Gm11567Q9D141 195 aa1.46□□□□□ -2.18
Scn9a-201ENSMUST00000100063 Krtap21-1Q925H4 128 aa1.44□□□□□ -2.18
Scn9a-201ENSMUST00000100063 Gm2431E9Q8S1 172 aa1.41□□□□□ -2.18
Scn9a-201ENSMUST00000100063 AhnakE9Q616 5656 aaKnown RBP1.38□□□□□ -2.19
Scn9a-201ENSMUST00000100063 Gm10153A0A1B0GRL1 320 aa1.23□□□□□ -2.21
Scn9a-201ENSMUST00000100063 Gm39115A0A1B0GSH7 232 aa1.19□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Gm45337A0A1B0GS71 263 aa1.18□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Gm40460A0A1B0GR10 244 aa1.16□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Gm7579A0A1B0GRJ4 243 aa1.16□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Gm45618A0A1B0GSA0 219 aa1.16□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Krtap5-5Q2TA51 241 aa1.16□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Krtap5-4Q62220 223 aa1.16□□□□□ -2.22
Scn9a-201ENSMUST00000100063 Gm29735A0A1B0GT06 219 aa0.93□□□□□ -2.26
Scn9a-201ENSMUST00000100063 Krtap5-1Q64507 230 aa0.92□□□□□ -2.26
Scn9a-201ENSMUST00000100063 Gm4559A4IF42 199 aa0.74□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 208.1 ms