RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Gm45337A0A1B0GS71 263 aa6.28□□□□□ -1.4
Usf3-201ENSMUST00000088356 Hmcn1D3YXG0 5634 aa6.26□□□□□ -1.41
Usf3-201ENSMUST00000088356 Gm17402F6Z0L5 76 aa6.26□□□□□ -1.41
Usf3-201ENSMUST00000088356 Lce3bQ9CQM7 98 aa6.26□□□□□ -1.41
Usf3-201ENSMUST00000088356 NebE9Q1W3 7152 aa6.23□□□□□ -1.41
Usf3-201ENSMUST00000088356 DstQ91ZU6 7393 aaKnown RBP6.23□□□□□ -1.41
Usf3-201ENSMUST00000088356 Gm10337F7DEP7 55 aa6.21□□□□□ -1.42
Usf3-201ENSMUST00000088356 SvipQ3UZP4 77 aa6.18□□□□□ -1.42
Usf3-201ENSMUST00000088356 H2al1kJ3QP08 105 aa6.17□□□□□ -1.42
Usf3-201ENSMUST00000088356 H2al1mQ9DAD9 105 aa6.17□□□□□ -1.42
Usf3-201ENSMUST00000088356 Lce1fB9EJP6 147 aa6.15□□□□□ -1.42
Usf3-201ENSMUST00000088356 Lce1cQ9D1C5 147 aa6.15□□□□□ -1.42
Usf3-201ENSMUST00000088356 Sec61gP60060 68 aa6.14□□□□□ -1.43
Usf3-201ENSMUST00000088356 4933415A04RikQ9D443 101 aa6.13□□□□□ -1.43
Usf3-201ENSMUST00000088356 Gm39115A0A1B0GSH7 232 aa6.08□□□□□ -1.44
Usf3-201ENSMUST00000088356 Krtap28-10A0A1Y7VP58 119 aa6.06□□□□□ -1.44
Usf3-201ENSMUST00000088356 Gm40460A0A1B0GR10 244 aa6.03□□□□□ -1.44
Usf3-201ENSMUST00000088356 Gm7579A0A1B0GRJ4 243 aa6.03□□□□□ -1.44
Usf3-201ENSMUST00000088356 Krtap5-5Q2TA51 241 aa6.03□□□□□ -1.44
Usf3-201ENSMUST00000088356 Krtap5-4Q62220 223 aa6.03□□□□□ -1.44
Usf3-201ENSMUST00000088356 A0A1Y7VLE6 161 aa6.02□□□□□ -1.45
Usf3-201ENSMUST00000088356 Gm10153A0A1B0GRL1 320 aa6.01□□□□□ -1.45
Usf3-201ENSMUST00000088356 Krtap19-4Q925H7 84 aa6.01□□□□□ -1.45
Usf3-201ENSMUST00000088356 Camk2n1Q6QWF9 78 aa6□□□□□ -1.45
Usf3-201ENSMUST00000088356 Krtap4-16Q91W93 202 aa6□□□□□ -1.45
Usf3-201ENSMUST00000088356 Gm10272F7CZ33 110 aa5.99□□□□□ -1.45
Usf3-201ENSMUST00000088356 Krtap28-13A0A087WQP5 138 aa5.98□□□□□ -1.45
Usf3-201ENSMUST00000088356 Gm9955Q8CEJ8 102 aa5.97□□□□□ -1.45
Usf3-201ENSMUST00000088356 A030005K14RikA0A1Y7VNY1 122 aa5.89□□□□□ -1.47
Usf3-201ENSMUST00000088356 Ndufs5Q99LY9 106 aa5.85□□□□□ -1.47
Usf3-201ENSMUST00000088356 Gm3646F6S692 53 aa5.84□□□□□ -1.47
Usf3-201ENSMUST00000088356 AhnakE9Q616 5656 aaKnown RBP5.8□□□□□ -1.48
Usf3-201ENSMUST00000088356 Gm45618A0A1B0GSA0 219 aa5.8□□□□□ -1.48
Usf3-201ENSMUST00000088356 Gm11938Q9D3H4 131 aa5.79□□□□□ -1.48
Usf3-201ENSMUST00000088356 Krtap7-1Q9D3I6 87 aa5.78□□□□□ -1.48
Usf3-201ENSMUST00000088356 Mt1P02802 61 aaKnown RBP5.77□□□□□ -1.49
Usf3-201ENSMUST00000088356 Sprr2fO70557 76 aa5.75□□□□□ -1.49
Usf3-201ENSMUST00000088356 Gm3880A0A1B0GSB3 72 aa5.62□□□□□ -1.51
Usf3-201ENSMUST00000088356 Gm12216A0A1W2P827 62 aa5.51□□□□□ -1.53
Usf3-201ENSMUST00000088356 Romo1P60603 79 aa5.43□□□□□ -1.54
Usf3-201ENSMUST00000088356 Lce3cQ91V05 98 aa5.42□□□□□ -1.54
Usf3-201ENSMUST00000088356 Mt3P28184 68 aa5.4□□□□□ -1.54
Usf3-201ENSMUST00000088356 A0A1Y7VJ07 166 aa5.37□□□□□ -1.55
Usf3-201ENSMUST00000088356 Gm7544A0A1Y7VJ58 118 aa5.37□□□□□ -1.55
Usf3-201ENSMUST00000088356 Lce3dE9Q8V1 98 aa5.32□□□□□ -1.56
Usf3-201ENSMUST00000088356 ObscnA2AAJ9 8891 aaKnown RBP5.2□□□□□ -1.58
Usf3-201ENSMUST00000088356 A030014E15RikA0A1Y7VJV2 120 aa5.19□□□□□ -1.58
Usf3-201ENSMUST00000088356 Gm10100J3QK64 120 aa5.07□□□□□ -1.6
Usf3-201ENSMUST00000088356 Lce3eF8VQJ0 98 aa5.06□□□□□ -1.6
Usf3-201ENSMUST00000088356 Lce3fQ6PAI4 98 aa5.06□□□□□ -1.6
Usf3-201ENSMUST00000088356 Gm40193A0A1B0GT39 78 aa4.99□□□□□ -1.61
Usf3-201ENSMUST00000088356 Mp68P56379 58 aa4.86□□□□□ -1.63
Usf3-201ENSMUST00000088356 4933428G20RikQ9D3X4 101 aa4.86□□□□□ -1.63
Usf3-201ENSMUST00000088356 Lce3aQ497I5 98 aa4.83□□□□□ -1.64
Usf3-201ENSMUST00000088356 Sprr2eO70556 76 aa4.76□□□□□ -1.65
Usf3-201ENSMUST00000088356 Tnp1P10856 55 aa4.76□□□□□ -1.65
Usf3-201ENSMUST00000088356 A030003K21RikA0A1Y7VIM3 128 aa4.71□□□□□ -1.66
Usf3-201ENSMUST00000088356 Sprr2hO70559 108 aa4.61□□□□□ -1.67
Usf3-201ENSMUST00000088356 Muc16A0A140LJ72 8478 aa4.59□□□□□ -1.68
Usf3-201ENSMUST00000088356 Gm10024A0A0A0MQA4 119 aa4.52□□□□□ -1.69
Usf3-201ENSMUST00000088356 Gm6217A0A1Y7VJK9 128 aa4.51□□□□□ -1.69
Usf3-201ENSMUST00000088356 Gm29735A0A1B0GT06 219 aa4.38□□□□□ -1.71
Usf3-201ENSMUST00000088356 Gm20538F6Z9R1 75 aa4.38□□□□□ -1.71
Usf3-201ENSMUST00000088356 Sprr2dO70555 85 aa4.25□□□□□ -1.73
Usf3-201ENSMUST00000088356 Ndufaf8A2AMZ4 74 aa4.23□□□□□ -1.73
Usf3-201ENSMUST00000088356 Gm10142J3KMP7 120 aa4.16□□□□□ -1.74
Usf3-201ENSMUST00000088356 A0A286YCP9 139 aa4.15□□□□□ -1.75
Usf3-201ENSMUST00000088356 Gm11567Q9D141 195 aa4.13□□□□□ -1.75
Usf3-201ENSMUST00000088356 1110025L11RikO09048 78 aa3.99□□□□□ -1.77
Usf3-201ENSMUST00000088356 Krtap6-5Q925H3 78 aa3.99□□□□□ -1.77
Usf3-201ENSMUST00000088356 Krtap5-1Q64507 230 aa3.69□□□□□ -1.82
Usf3-201ENSMUST00000088356 Gm9112A2AI92 75 aa3.64□□□□□ -1.83
Usf3-201ENSMUST00000088356 Gm10229O08631 77 aa3.62□□□□□ -1.83
Usf3-201ENSMUST00000088356 Sprr2bO70554 98 aa3.57□□□□□ -1.84
Usf3-201ENSMUST00000088356 Krtap31-2Q8CAY5 177 aa3.57□□□□□ -1.84
Usf3-201ENSMUST00000088356 Krtap31-1Q9D644 177 aa3.52□□□□□ -1.85
Usf3-201ENSMUST00000088356 Krtap6-2O08884 159 aa3.32□□□□□ -1.88
Usf3-201ENSMUST00000088356 Krtap21-1Q925H4 128 aa3.19□□□□□ -1.9
Usf3-201ENSMUST00000088356 Phgr1Q8K0G7 91 aa2.61□□□□□ -1.99
Usf3-201ENSMUST00000088356 Gm4559A4IF42 199 aa2.57□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 70.2 ms