RNA–Protein interactions for RNA: ENSMUST00000060956.12

Trappc1-201, Transcript of Trafficking protein particle complex subunit 1, mousemouse

TSL 3 BASIC

Gene Trappc1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc1-201ENSMUST00000060956 Camk2n1Q6QWF9 78 aa2.69□□□□□ -1.98
Trappc1-201ENSMUST00000060956 Gm6358A0A087WPH4 74 aa2.68□□□□□ -1.98
Trappc1-201ENSMUST00000060956 Cox6b2Q80ZN9 88 aa2.68□□□□□ -1.98
Trappc1-201ENSMUST00000060956 Defb1P56386 69 aa2.66□□□□□ -1.98
Trappc1-201ENSMUST00000060956 Gm12216A0A1W2P827 62 aa2.65□□□□□ -1.99
Trappc1-201ENSMUST00000060956 Sprr2kO70562 68 aa2.65□□□□□ -1.99
Trappc1-201ENSMUST00000060956 Gm9955Q8CEJ8 102 aa2.64□□□□□ -1.99
Trappc1-201ENSMUST00000060956 Gm20537G3UYK7 97 aa2.63□□□□□ -1.99
Trappc1-201ENSMUST00000060956 Gm17606F6ZL36 78 aa2.59□□□□□ -1.99
Trappc1-201ENSMUST00000060956 Gm3880A0A1B0GSB3 72 aa2.57□□□□□ -2
Trappc1-201ENSMUST00000060956 Krtap13-1Q8K198 168 aa2.57□□□□□ -2
Trappc1-201ENSMUST00000060956 Gm20538F6Z9R1 75 aa2.56□□□□□ -2
Trappc1-201ENSMUST00000060956 Gm17416Q30KP4 66 aa2.56□□□□□ -2
Trappc1-201ENSMUST00000060956 Romo1P60603 79 aa2.55□□□□□ -2
Trappc1-201ENSMUST00000060956 Krtap20-2E9Q0A8 60 aa2.54□□□□□ -2
Trappc1-201ENSMUST00000060956 Krtap7-1Q9D3I6 87 aa2.54□□□□□ -2
Trappc1-201ENSMUST00000060956 Mp68P56379 58 aa2.51□□□□□ -2.01
Trappc1-201ENSMUST00000060956 Gm10382Q3V0T5 144 aa2.51□□□□□ -2.01
Trappc1-201ENSMUST00000060956 Lce3dE9Q8V1 98 aa2.49□□□□□ -2.01
Trappc1-201ENSMUST00000060956 Lce3aQ497I5 98 aa2.49□□□□□ -2.01
Trappc1-201ENSMUST00000060956 Eppk1Q8R0W0 6548 aa2.47□□□□□ -2.01
Trappc1-201ENSMUST00000060956 Gm7579A0A1B0GRJ4 243 aa2.46□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Gm17402F6Z0L5 76 aa2.46□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Gm40193A0A1B0GT39 78 aa2.44□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Gm4559A4IF42 199 aa2.43□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Sprr2gO70558 76 aa2.43□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Mt2P02798 61 aa2.43□□□□□ -2.02
Trappc1-201ENSMUST00000060956 2310046K23RikA0A0A6YVW6 87 aa2.42□□□□□ -2.02
Trappc1-201ENSMUST00000060956 BC029722A0A0N4SW31 51 aa2.41□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Gm19426M0QWC7 77 aa2.41□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Krtap8-1O08633 61 aa2.41□□□□□ -2.02
Trappc1-201ENSMUST00000060956 CriptO70333 101 aa2.41□□□□□ -2.02
Trappc1-201ENSMUST00000060956 Krtap19-9aF8WH65 55 aa2.4□□□□□ -2.03
Trappc1-201ENSMUST00000060956 Gm11639A0A1D5RLM8 5808 aa2.4□□□□□ -2.03
Trappc1-201ENSMUST00000060956 Krtap5-1Q64507 230 aa2.37□□□□□ -2.03
Trappc1-201ENSMUST00000060956 Ndufaf8A2AMZ4 74 aa2.35□□□□□ -2.03
Trappc1-201ENSMUST00000060956 Macf1Q9QXZ0 7354 aaKnown RBP2.33□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Gm4553A0A1B0GSA9 284 aa2.32□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Muc19Q6PZE0 7524 aa2.3□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Krtap22-2J3QNX6 67 aa2.3□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Krtap5-2Q9D5Z7 189 aa2.29□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Sprr2a3Q4KL71 83 aa2.28□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Sprr2a1Q9CQK8 83 aa2.28□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Gpr98Q8VHN7 6298 aaKnown RBP2.28□□□□□ -2.04
Trappc1-201ENSMUST00000060956 Lce3fQ6PAI4 98 aa2.27□□□□□ -2.05
Trappc1-201ENSMUST00000060956 Lce3cQ91V05 98 aa2.27□□□□□ -2.05
Trappc1-201ENSMUST00000060956 Kmt2dQ6PDK2 5588 aa2.22□□□□□ -2.05
Trappc1-201ENSMUST00000060956 Spink7Q6IE32 76 aa2.2□□□□□ -2.06
Trappc1-201ENSMUST00000060956 Gm9112A2AI92 75 aa2.19□□□□□ -2.06
Trappc1-201ENSMUST00000060956 4933428G20RikQ9D3X4 101 aa2.16□□□□□ -2.06
Trappc1-201ENSMUST00000060956 Gm10229O08631 77 aa2.15□□□□□ -2.07
Trappc1-201ENSMUST00000060956 Tnp1P10856 55 aa2.15□□□□□ -2.07
Trappc1-201ENSMUST00000060956 Sprr2iO70560 76 aa2.12□□□□□ -2.07
Trappc1-201ENSMUST00000060956 DstQ91ZU6 7393 aaKnown RBP2.08□□□□□ -2.08
Trappc1-201ENSMUST00000060956 NebE9Q1W3 7152 aa2.06□□□□□ -2.08
Trappc1-201ENSMUST00000060956 Syne1Q6ZWR6 8799 aa2.05□□□□□ -2.08
Trappc1-201ENSMUST00000060956 Hmcn1D3YXG0 5634 aa2.02□□□□□ -2.09
Trappc1-201ENSMUST00000060956 Krtap4-16Q91W93 202 aa2.01□□□□□ -2.09
Trappc1-201ENSMUST00000060956 Krtap6-5Q925H3 78 aa1.99□□□□□ -2.09
Trappc1-201ENSMUST00000060956 Krtap19-9bQ99NG9 58 aa1.97□□□□□ -2.09
Trappc1-201ENSMUST00000060956 Lce3eF8VQJ0 98 aa1.95□□□□□ -2.1
Trappc1-201ENSMUST00000060956 Gm40460A0A1B0GR10 244 aa1.94□□□□□ -2.1
Trappc1-201ENSMUST00000060956 Krtap5-5Q2TA51 241 aa1.94□□□□□ -2.1
Trappc1-201ENSMUST00000060956 Lce3bQ9CQM7 98 aa1.91□□□□□ -2.1
Trappc1-201ENSMUST00000060956 Krtap19-4Q925H7 84 aa1.89□□□□□ -2.11
Trappc1-201ENSMUST00000060956 AhnakE9Q616 5656 aaKnown RBP1.84□□□□□ -2.11
Trappc1-201ENSMUST00000060956 Sprr2fO70557 76 aa1.84□□□□□ -2.11
Trappc1-201ENSMUST00000060956 Mt1P02802 61 aaKnown RBP1.79□□□□□ -2.12
Trappc1-201ENSMUST00000060956 Gm11938Q9D3H4 131 aa1.77□□□□□ -2.13
Trappc1-201ENSMUST00000060956 Sprr2dO70555 85 aa1.76□□□□□ -2.13
Trappc1-201ENSMUST00000060956 Krtap6-2O08884 159 aa1.66□□□□□ -2.14
Trappc1-201ENSMUST00000060956 ObscnA2AAJ9 8891 aaKnown RBP1.58□□□□□ -2.16
Trappc1-201ENSMUST00000060956 Gm10024A0A0A0MQA4 119 aa1.58□□□□□ -2.16
Trappc1-201ENSMUST00000060956 Sprr2eO70556 76 aa1.55□□□□□ -2.16
Trappc1-201ENSMUST00000060956 Sprr2hO70559 108 aa1.51□□□□□ -2.17
Trappc1-201ENSMUST00000060956 1110025L11RikO09048 78 aa1.5□□□□□ -2.17
Trappc1-201ENSMUST00000060956 Muc16A0A140LJ72 8478 aa1.49□□□□□ -2.17
Trappc1-201ENSMUST00000060956 Krtap21-1Q925H4 128 aa1.46□□□□□ -2.18
Trappc1-201ENSMUST00000060956 Sprr2bO70554 98 aa1.13□□□□□ -2.23
Trappc1-201ENSMUST00000060956 Phgr1Q8K0G7 91 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 72.8 ms