RNA–Protein interactions for RNA: ENSMUST00000044163.9

Cnot4-201, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cnot4, Length 3,337 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-201ENSMUST00000044163 Prm1P02319 51 aa2.62□□□□□ -1.99
Cnot4-201ENSMUST00000044163 Gm10142J3KMP7 120 aa2.6□□□□□ -1.99
Cnot4-201ENSMUST00000044163 Gm7735D3YX18 52 aa2.6□□□□□ -1.99
Cnot4-201ENSMUST00000044163 Ubr4A2AN08 5180 aa2.59□□□□□ -2
Cnot4-201ENSMUST00000044163 Rnf213E9Q555 5152 aaKnown RBP2.58□□□□□ -2
Cnot4-201ENSMUST00000044163 Fat4Q2PZL6 4981 aa2.55□□□□□ -2
Cnot4-201ENSMUST00000044163 Lce1iQ9D6P5 149 aa2.54□□□□□ -2
Cnot4-201ENSMUST00000044163 Krtap8-1O08633 61 aa2.53□□□□□ -2
Cnot4-201ENSMUST00000044163 Krtap19-2Q925I0 141 aa2.53□□□□□ -2
Cnot4-201ENSMUST00000044163 Lce1a2Q9D1K4 149 aa2.52□□□□□ -2.01
Cnot4-201ENSMUST00000044163 SspoQ8CG65 4998 aa2.52□□□□□ -2.01
Cnot4-201ENSMUST00000044163 Gm9112A2AI92 75 aa2.52□□□□□ -2.01
Cnot4-201ENSMUST00000044163 Tnp1P10856 55 aa2.5□□□□□ -2.01
Cnot4-201ENSMUST00000044163 Krtap5-1Q64507 230 aa2.48□□□□□ -2.01
Cnot4-201ENSMUST00000044163 Krtap19-9bQ99NG9 58 aa2.47□□□□□ -2.01
Cnot4-201ENSMUST00000044163 Gm4553A0A1B0GSA9 284 aa2.46□□□□□ -2.02
Cnot4-201ENSMUST00000044163 Krtap4-8B1AQA8 209 aa2.45□□□□□ -2.02
Cnot4-201ENSMUST00000044163 2310046K23RikA0A0A6YVW6 87 aa2.44□□□□□ -2.02
Cnot4-201ENSMUST00000044163 Krtap9-3Q3V2C1 136 aa2.42□□□□□ -2.02
Cnot4-201ENSMUST00000044163 Gm4559A4IF42 199 aa2.41□□□□□ -2.02
Cnot4-201ENSMUST00000044163 Gm10272F7CZ33 110 aa2.41□□□□□ -2.02
Cnot4-201ENSMUST00000044163 Gm11596B1AQB0 205 aa2.4□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Gm10061D3Z714 54 aa2.4□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Gm6358A0A087WPH4 74 aa2.37□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Mt3P28184 68 aa2.37□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Mt2P02798 61 aa2.34□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Muc5bE9Q5I3 4800 aa2.34□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Krtap4-6Q3V4B7 195 aa2.34□□□□□ -2.03
Cnot4-201ENSMUST00000044163 Gpr98Q8VHN7 6298 aaKnown RBP2.31□□□□□ -2.04
Cnot4-201ENSMUST00000044163 Krtap5-2Q9D5Z7 189 aa2.24□□□□□ -2.05
Cnot4-201ENSMUST00000044163 Eppk1Q8R0W0 6548 aa2.23□□□□□ -2.05
Cnot4-201ENSMUST00000044163 Gm11568A2A4M2 211 aa2.22□□□□□ -2.05
Cnot4-201ENSMUST00000044163 Krtap9-1Q64526 186 aa2.22□□□□□ -2.05
Cnot4-201ENSMUST00000044163 Krtap22-2J3QNX6 67 aa2.2□□□□□ -2.06
Cnot4-201ENSMUST00000044163 Sprr2gO70558 76 aa2.18□□□□□ -2.06
Cnot4-201ENSMUST00000044163 Krtap5-5Q2TA51 241 aa2.18□□□□□ -2.06
Cnot4-201ENSMUST00000044163 Sprr2dO70555 85 aa2.16□□□□□ -2.06
Cnot4-201ENSMUST00000044163 Gm11938Q9D3H4 131 aa2.13□□□□□ -2.07
Cnot4-201ENSMUST00000044163 4933428G20RikQ9D3X4 101 aa2.07□□□□□ -2.08
Cnot4-201ENSMUST00000044163 Gm7579A0A1B0GRJ4 243 aa2.05□□□□□ -2.08
Cnot4-201ENSMUST00000044163 Syne2Q6ZWQ0 6874 aaKnown RBP2.04□□□□□ -2.08
Cnot4-201ENSMUST00000044163 Gm11564A2A4L9 201 aa2.01□□□□□ -2.09
Cnot4-201ENSMUST00000044163 Krtap19-4Q925H7 84 aa2.01□□□□□ -2.09
Cnot4-201ENSMUST00000044163 Mdn1A2ANY6 5589 aaKnown RBP1.96□□□□□ -2.1
Cnot4-201ENSMUST00000044163 Krtap6-3A0A087WQL6 57 aa1.96□□□□□ -2.1
Cnot4-201ENSMUST00000044163 Gm40460A0A1B0GR10 244 aa1.96□□□□□ -2.1
Cnot4-201ENSMUST00000044163 Lce3bQ9CQM7 98 aa1.96□□□□□ -2.1
Cnot4-201ENSMUST00000044163 Gm11639A0A1D5RLM8 5808 aa1.94□□□□□ -2.1
Cnot4-201ENSMUST00000044163 Syne1Q6ZWR6 8799 aa1.93□□□□□ -2.1
Cnot4-201ENSMUST00000044163 Sprr2hO70559 108 aa1.88□□□□□ -2.11
Cnot4-201ENSMUST00000044163 Mt4P47945 62 aa1.87□□□□□ -2.11
Cnot4-201ENSMUST00000044163 Krtap20-2E9Q0A8 60 aa1.85□□□□□ -2.11
Cnot4-201ENSMUST00000044163 Sprr2iO70560 76 aa1.85□□□□□ -2.11
Cnot4-201ENSMUST00000044163 Lce3cQ91V05 98 aa1.85□□□□□ -2.11
Cnot4-201ENSMUST00000044163 Lce3dE9Q8V1 98 aa1.84□□□□□ -2.11
Cnot4-201ENSMUST00000044163 Lce3eF8VQJ0 98 aa1.83□□□□□ -2.12
Cnot4-201ENSMUST00000044163 Lce3fQ6PAI4 98 aa1.83□□□□□ -2.12
Cnot4-201ENSMUST00000044163 Sprr2eO70556 76 aa1.83□□□□□ -2.12
Cnot4-201ENSMUST00000044163 ObscnA2AAJ9 8891 aaKnown RBP1.8□□□□□ -2.12
Cnot4-201ENSMUST00000044163 Mt1P02802 61 aaKnown RBP1.79□□□□□ -2.12
Cnot4-201ENSMUST00000044163 Sprr2kO70562 68 aa1.79□□□□□ -2.12
Cnot4-201ENSMUST00000044163 Lce3aQ497I5 98 aa1.77□□□□□ -2.13
Cnot4-201ENSMUST00000044163 Sprr2fO70557 76 aa1.75□□□□□ -2.13
Cnot4-201ENSMUST00000044163 Muc16A0A140LJ72 8478 aa1.72□□□□□ -2.13
Cnot4-201ENSMUST00000044163 Fsip2A2ARZ3 6995 aa1.68□□□□□ -2.14
Cnot4-201ENSMUST00000044163 DstQ91ZU6 7393 aaKnown RBP1.68□□□□□ -2.14
Cnot4-201ENSMUST00000044163 Kmt2dQ6PDK2 5588 aa1.66□□□□□ -2.14
Cnot4-201ENSMUST00000044163 Krtap4-16Q91W93 202 aa1.6□□□□□ -2.15
Cnot4-201ENSMUST00000044163 Gm10024A0A0A0MQA4 119 aa1.55□□□□□ -2.16
Cnot4-201ENSMUST00000044163 Macf1Q9QXZ0 7354 aaKnown RBP1.43□□□□□ -2.18
Cnot4-201ENSMUST00000044163 Gm10229O08631 77 aa1.41□□□□□ -2.18
Cnot4-201ENSMUST00000044163 AhnakE9Q616 5656 aaKnown RBP1.39□□□□□ -2.19
Cnot4-201ENSMUST00000044163 Muc19Q6PZE0 7524 aa1.38□□□□□ -2.19
Cnot4-201ENSMUST00000044163 1110025L11RikO09048 78 aa1.37□□□□□ -2.19
Cnot4-201ENSMUST00000044163 Krtap6-5Q925H3 78 aa1.37□□□□□ -2.19
Cnot4-201ENSMUST00000044163 NebE9Q1W3 7152 aa1.34□□□□□ -2.2
Cnot4-201ENSMUST00000044163 Sprr2bO70554 98 aa1.25□□□□□ -2.21
Cnot4-201ENSMUST00000044163 Krtap21-1Q925H4 128 aa1.15□□□□□ -2.23
Cnot4-201ENSMUST00000044163 Phgr1Q8K0G7 91 aa1.1□□□□□ -2.23
Cnot4-201ENSMUST00000044163 Krtap6-2O08884 159 aa1.02□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 115.8 ms