RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Sprr2bO70554 98 aa4.89□□□□□ -1.63
Col27a1-201ENSMUST00000036300 Gm11938Q9D3H4 131 aa4.81□□□□□ -1.64
Col27a1-201ENSMUST00000036300 Ryr3A2AGL3 4863 aa4.8□□□□□ -1.64
Col27a1-201ENSMUST00000036300 Syne1Q6ZWR6 8799 aa4.78□□□□□ -1.64
Col27a1-201ENSMUST00000036300 Mt3P28184 68 aa4.77□□□□□ -1.65
Col27a1-201ENSMUST00000036300 Herc2Q4U2R1 4836 aa4.75□□□□□ -1.65
Col27a1-201ENSMUST00000036300 Krtap4-16Q91W93 202 aa4.69□□□□□ -1.66
Col27a1-201ENSMUST00000036300 PcloQ9QYX7 5068 aa4.66□□□□□ -1.66
Col27a1-201ENSMUST00000036300 Syne2Q6ZWQ0 6874 aaKnown RBP4.66□□□□□ -1.66
Col27a1-201ENSMUST00000036300 Fsip2A2ARZ3 6995 aa4.62□□□□□ -1.67
Col27a1-201ENSMUST00000036300 Gm11554B1AQB2 190 aa4.59□□□□□ -1.68
Col27a1-201ENSMUST00000036300 Krtap17-1A2A5X6 109 aa4.56□□□□□ -1.68
Col27a1-201ENSMUST00000036300 Ryr2E9Q401 4966 aaKnown RBP4.45□□□□□ -1.7
Col27a1-201ENSMUST00000036300 Mdn1A2ANY6 5589 aaKnown RBP4.45□□□□□ -1.7
Col27a1-201ENSMUST00000036300 Herc1E9PZP8 4859 aa4.44□□□□□ -1.7
Col27a1-201ENSMUST00000036300 Birc6O88738 4882 aa4.43□□□□□ -1.7
Col27a1-201ENSMUST00000036300 HydinQ80W93 5154 aa4.39□□□□□ -1.71
Col27a1-201ENSMUST00000036300 Krtap6-3A0A087WQL6 57 aa4.36□□□□□ -1.71
Col27a1-201ENSMUST00000036300 ZanO88799 5376 aa4.29□□□□□ -1.72
Col27a1-201ENSMUST00000036300 Hmcn2A2AJ76 5100 aa4.28□□□□□ -1.72
Col27a1-201ENSMUST00000036300 Kiaa1109A2AAE1 5005 aa4.21□□□□□ -1.74
Col27a1-201ENSMUST00000036300 Krtap20-2E9Q0A8 60 aa4.16□□□□□ -1.74
Col27a1-201ENSMUST00000036300 Ubr4A2AN08 5180 aa4.1□□□□□ -1.75
Col27a1-201ENSMUST00000036300 Mt1P02802 61 aaKnown RBP4.09□□□□□ -1.76
Col27a1-201ENSMUST00000036300 Muc5bE9Q5I3 4800 aa4.07□□□□□ -1.76
Col27a1-201ENSMUST00000036300 ObscnA2AAJ9 8891 aaKnown RBP4.01□□□□□ -1.77
Col27a1-201ENSMUST00000036300 Abca13Q5SSE9 5034 aa3.96□□□□□ -1.77
Col27a1-201ENSMUST00000036300 Muc16A0A140LJ72 8478 aa3.96□□□□□ -1.78
Col27a1-201ENSMUST00000036300 4932415D10RikA0A1W2P6U8 4986 aa3.9□□□□□ -1.79
Col27a1-201ENSMUST00000036300 Fat4Q2PZL6 4981 aa3.8□□□□□ -1.8
Col27a1-201ENSMUST00000036300 Gm11555B1AQ89 175 aa3.6□□□□□ -1.83
Col27a1-201ENSMUST00000036300 Macf1Q9QXZ0 7354 aaKnown RBP3.55□□□□□ -1.84
Col27a1-201ENSMUST00000036300 Rnf213E9Q555 5152 aaKnown RBP3.48□□□□□ -1.85
Col27a1-201ENSMUST00000036300 SspoQ8CG65 4998 aa3.46□□□□□ -1.86
Col27a1-201ENSMUST00000036300 1110025L11RikO09048 78 aa3.43□□□□□ -1.86
Col27a1-201ENSMUST00000036300 Krtap6-5Q925H3 78 aa3.43□□□□□ -1.86
Col27a1-201ENSMUST00000036300 Muc19Q6PZE0 7524 aa3.41□□□□□ -1.86
Col27a1-201ENSMUST00000036300 NebE9Q1W3 7152 aa3.4□□□□□ -1.86
Col27a1-201ENSMUST00000036300 Ush2AQ2QI47 5193 aa3.39□□□□□ -1.87
Col27a1-201ENSMUST00000036300 Gm10229O08631 77 aa3.36□□□□□ -1.87
Col27a1-201ENSMUST00000036300 DstQ91ZU6 7393 aaKnown RBP3.33□□□□□ -1.88
Col27a1-201ENSMUST00000036300 Phgr1Q8K0G7 91 aa3.28□□□□□ -1.88
Col27a1-201ENSMUST00000036300 Gm11559Q9D3H7 191 aa3.13□□□□□ -1.91
Col27a1-201ENSMUST00000036300 Eppk1Q8R0W0 6548 aa3.09□□□□□ -1.92
Col27a1-201ENSMUST00000036300 Gm11568A2A4M2 211 aa2.98□□□□□ -1.93
Col27a1-201ENSMUST00000036300 Krtap9-1Q64526 186 aa2.98□□□□□ -1.93
Col27a1-201ENSMUST00000036300 Kmt2dQ6PDK2 5588 aa2.83□□□□□ -1.96
Col27a1-201ENSMUST00000036300 Krtap6-2O08884 159 aa2.64□□□□□ -1.99
Col27a1-201ENSMUST00000036300 Gm11567Q9D141 195 aa2.55□□□□□ -2
Col27a1-201ENSMUST00000036300 Krtap5-2Q9D5Z7 189 aa2.36□□□□□ -2.03
Col27a1-201ENSMUST00000036300 Krtap21-1Q925H4 128 aa2.31□□□□□ -2.04
Col27a1-201ENSMUST00000036300 Gm4553A0A1B0GSA9 284 aa2.24□□□□□ -2.05
Col27a1-201ENSMUST00000036300 Gpr98Q8VHN7 6298 aaKnown RBP2.16□□□□□ -2.06
Col27a1-201ENSMUST00000036300 Hmcn1D3YXG0 5634 aa2.12□□□□□ -2.07
Col27a1-201ENSMUST00000036300 Gm2431E9Q8S1 172 aa2.12□□□□□ -2.07
Col27a1-201ENSMUST00000036300 A030005L19RikA0A1Y7VIU2 113 aa2.03□□□□□ -2.08
Col27a1-201ENSMUST00000036300 Gm11639A0A1D5RLM8 5808 aa1.95□□□□□ -2.1
Col27a1-201ENSMUST00000036300 A0A286YCP9 139 aa1.89□□□□□ -2.11
Col27a1-201ENSMUST00000036300 Gm10153A0A1B0GRL1 320 aa1.86□□□□□ -2.11
Col27a1-201ENSMUST00000036300 A0A1Y7VLE6 161 aa1.77□□□□□ -2.13
Col27a1-201ENSMUST00000036300 Gm45337A0A1B0GS71 263 aa1.73□□□□□ -2.13
Col27a1-201ENSMUST00000036300 Krtap28-13A0A087WQP5 138 aa1.73□□□□□ -2.13
Col27a1-201ENSMUST00000036300 AhnakE9Q616 5656 aaKnown RBP1.66□□□□□ -2.14
Col27a1-201ENSMUST00000036300 Gm39115A0A1B0GSH7 232 aa1.64□□□□□ -2.15
Col27a1-201ENSMUST00000036300 Gm40460A0A1B0GR10 244 aa1.64□□□□□ -2.15
Col27a1-201ENSMUST00000036300 Gm7579A0A1B0GRJ4 243 aa1.64□□□□□ -2.15
Col27a1-201ENSMUST00000036300 Krtap5-5Q2TA51 241 aa1.64□□□□□ -2.15
Col27a1-201ENSMUST00000036300 Krtap5-4Q62220 223 aa1.64□□□□□ -2.15
Col27a1-201ENSMUST00000036300 A0A1Y7VJ07 166 aa1.43□□□□□ -2.18
Col27a1-201ENSMUST00000036300 A0A1Y7VJH8 109 aa1.42□□□□□ -2.18
Col27a1-201ENSMUST00000036300 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Col27a1-201ENSMUST00000036300 A030014E15RikA0A1Y7VJV2 120 aa1.32□□□□□ -2.2
Col27a1-201ENSMUST00000036300 Krtap28-10A0A1Y7VP58 119 aa1.28□□□□□ -2.2
Col27a1-201ENSMUST00000036300 Gm45618A0A1B0GSA0 219 aa1.25□□□□□ -2.21
Col27a1-201ENSMUST00000036300 A030005K14RikA0A1Y7VNY1 122 aa1.24□□□□□ -2.21
Col27a1-201ENSMUST00000036300 Gm29735A0A1B0GT06 219 aa1.21□□□□□ -2.22
Col27a1-201ENSMUST00000036300 A030003K21RikA0A1Y7VIM3 128 aa0.9□□□□□ -2.26
Col27a1-201ENSMUST00000036300 Gm6217A0A1Y7VJK9 128 aa0.81□□□□□ -2.28
Col27a1-201ENSMUST00000036300 Gm4559A4IF42 199 aa0.67□□□□□ -2.3
Col27a1-201ENSMUST00000036300 Gm7544A0A1Y7VJ58 118 aa0.56□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 65.6 ms