RNA–Protein interactions for RNA: ENSMUST00000034927.12

Zic1-201, Transcript of Zinc finger protein ZIC 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Zic1, Length 5,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Zic1-201ENSMUST00000034927 Krtap4-9B1AQA9 244 aa5.38□□□□□ -1.55
Zic1-201ENSMUST00000034927 Krtap4-7Q9D732 168 aa5.32□□□□□ -1.56
Zic1-201ENSMUST00000034927 2300003K06RikA2A4M0 262 aa5.29□□□□□ -1.56
Zic1-201ENSMUST00000034927 Lce1a2Q9D1K4 149 aa5.28□□□□□ -1.56
Zic1-201ENSMUST00000034927 Muc5bE9Q5I3 4800 aa5.28□□□□□ -1.56
Zic1-201ENSMUST00000034927 Sprr2dO70555 85 aa5.22□□□□□ -1.57
Zic1-201ENSMUST00000034927 Krtap6-3A0A087WQL6 57 aa5.22□□□□□ -1.57
Zic1-201ENSMUST00000034927 Krtap4-13Q9D7P3 165 aa5.19□□□□□ -1.58
Zic1-201ENSMUST00000034927 Eppk1Q8R0W0 6548 aa5.18□□□□□ -1.58
Zic1-201ENSMUST00000034927 Ubr4A2AN08 5180 aa5.14□□□□□ -1.59
Zic1-201ENSMUST00000034927 Fat4Q2PZL6 4981 aa5.12□□□□□ -1.59
Zic1-201ENSMUST00000034927 Abca13Q5SSE9 5034 aa5.1□□□□□ -1.59
Zic1-201ENSMUST00000034927 Syne2Q6ZWQ0 6874 aaKnown RBP5.09□□□□□ -1.59
Zic1-201ENSMUST00000034927 Sprr2hO70559 108 aa5.09□□□□□ -1.59
Zic1-201ENSMUST00000034927 Rnf213E9Q555 5152 aaKnown RBP5.08□□□□□ -1.6
Zic1-201ENSMUST00000034927 ZanO88799 5376 aa5.06□□□□□ -1.6
Zic1-201ENSMUST00000034927 Lce1a1Q9CQH5 143 aa5.04□□□□□ -1.6
Zic1-201ENSMUST00000034927 Gm11938Q9D3H4 131 aa5.04□□□□□ -1.6
Zic1-201ENSMUST00000034927 Hmcn2A2AJ76 5100 aa4.98□□□□□ -1.61
Zic1-201ENSMUST00000034927 Krtap31-1Q9D644 177 aa4.93□□□□□ -1.62
Zic1-201ENSMUST00000034927 Lce1kJ3QP15 125 aa4.93□□□□□ -1.62
Zic1-201ENSMUST00000034927 Mt3P28184 68 aa4.91□□□□□ -1.62
Zic1-201ENSMUST00000034927 Fsip2A2ARZ3 6995 aa4.9□□□□□ -1.62
Zic1-201ENSMUST00000034927 Krtap31-2Q8CAY5 177 aa4.81□□□□□ -1.64
Zic1-201ENSMUST00000034927 Syne1Q6ZWR6 8799 aa4.71□□□□□ -1.66
Zic1-201ENSMUST00000034927 Ush2AQ2QI47 5193 aa4.7□□□□□ -1.66
Zic1-201ENSMUST00000034927 Gm11554B1AQB2 190 aa4.69□□□□□ -1.66
Zic1-201ENSMUST00000034927 SspoQ8CG65 4998 aa4.64□□□□□ -1.67
Zic1-201ENSMUST00000034927 A0A1Y7VLE6 161 aa4.52□□□□□ -1.69
Zic1-201ENSMUST00000034927 Sprr2bO70554 98 aa4.51□□□□□ -1.69
Zic1-201ENSMUST00000034927 Krtap20-2E9Q0A8 60 aa4.5□□□□□ -1.69
Zic1-201ENSMUST00000034927 Mt1P02802 61 aaKnown RBP4.43□□□□□ -1.7
Zic1-201ENSMUST00000034927 Krtap4-16Q91W93 202 aa4.42□□□□□ -1.7
Zic1-201ENSMUST00000034927 Gpr98Q8VHN7 6298 aaKnown RBP4.32□□□□□ -1.72
Zic1-201ENSMUST00000034927 DstQ91ZU6 7393 aaKnown RBP4.32□□□□□ -1.72
Zic1-201ENSMUST00000034927 Gm11555B1AQ89 175 aa4.31□□□□□ -1.72
Zic1-201ENSMUST00000034927 A0A1Y7VJH8 109 aa4.25□□□□□ -1.73
Zic1-201ENSMUST00000034927 ObscnA2AAJ9 8891 aaKnown RBP4.24□□□□□ -1.73
Zic1-201ENSMUST00000034927 Krtap28-10A0A1Y7VP58 119 aa4.23□□□□□ -1.73
Zic1-201ENSMUST00000034927 Macf1Q9QXZ0 7354 aaKnown RBP4.23□□□□□ -1.73
Zic1-201ENSMUST00000034927 Kmt2dQ6PDK2 5588 aa4.21□□□□□ -1.74
Zic1-201ENSMUST00000034927 NebE9Q1W3 7152 aa4.14□□□□□ -1.75
Zic1-201ENSMUST00000034927 A030003K21RikA0A1Y7VIM3 128 aa4.06□□□□□ -1.76
Zic1-201ENSMUST00000034927 Krtap28-13A0A087WQP5 138 aa4.05□□□□□ -1.76
Zic1-201ENSMUST00000034927 Muc16A0A140LJ72 8478 aa3.95□□□□□ -1.78
Zic1-201ENSMUST00000034927 A030005L19RikA0A1Y7VIU2 113 aa3.94□□□□□ -1.78
Zic1-201ENSMUST00000034927 A030005K14RikA0A1Y7VNY1 122 aa3.91□□□□□ -1.78
Zic1-201ENSMUST00000034927 Gm7544A0A1Y7VJ58 118 aa3.85□□□□□ -1.79
Zic1-201ENSMUST00000034927 Gm11639A0A1D5RLM8 5808 aa3.84□□□□□ -1.8
Zic1-201ENSMUST00000034927 A0A1Y7VJ07 166 aa3.82□□□□□ -1.8
Zic1-201ENSMUST00000034927 Gm6217A0A1Y7VJK9 128 aa3.79□□□□□ -1.8
Zic1-201ENSMUST00000034927 Gm11559Q9D3H7 191 aa3.76□□□□□ -1.81
Zic1-201ENSMUST00000034927 1110025L11RikO09048 78 aa3.57□□□□□ -1.84
Zic1-201ENSMUST00000034927 Krtap6-5Q925H3 78 aa3.57□□□□□ -1.84
Zic1-201ENSMUST00000034927 A030014E15RikA0A1Y7VJV2 120 aa3.56□□□□□ -1.84
Zic1-201ENSMUST00000034927 Krtap9-1Q64526 186 aa3.41□□□□□ -1.86
Zic1-201ENSMUST00000034927 Gm10229O08631 77 aa3.37□□□□□ -1.87
Zic1-201ENSMUST00000034927 Gm11568A2A4M2 211 aa3.34□□□□□ -1.88
Zic1-201ENSMUST00000034927 Hmcn1D3YXG0 5634 aa3.32□□□□□ -1.88
Zic1-201ENSMUST00000034927 Muc19Q6PZE0 7524 aa3.31□□□□□ -1.88
Zic1-201ENSMUST00000034927 Krtap5-2Q9D5Z7 189 aa3.23□□□□□ -1.89
Zic1-201ENSMUST00000034927 Gm4553A0A1B0GSA9 284 aa3.16□□□□□ -1.9
Zic1-201ENSMUST00000034927 Phgr1Q8K0G7 91 aa3.11□□□□□ -1.91
Zic1-201ENSMUST00000034927 AhnakE9Q616 5656 aaKnown RBP2.95□□□□□ -1.94
Zic1-201ENSMUST00000034927 Gm2431E9Q8S1 172 aa2.85□□□□□ -1.95
Zic1-201ENSMUST00000034927 A0A286YCP9 139 aa2.77□□□□□ -1.97
Zic1-201ENSMUST00000034927 Krtap6-2O08884 159 aa2.77□□□□□ -1.97
Zic1-201ENSMUST00000034927 Gm10153A0A1B0GRL1 320 aa2.69□□□□□ -1.98
Zic1-201ENSMUST00000034927 Gm45337A0A1B0GS71 263 aa2.63□□□□□ -1.99
Zic1-201ENSMUST00000034927 Gm40460A0A1B0GR10 244 aa2.63□□□□□ -1.99
Zic1-201ENSMUST00000034927 Gm7579A0A1B0GRJ4 243 aa2.63□□□□□ -1.99
Zic1-201ENSMUST00000034927 Krtap5-5Q2TA51 241 aa2.63□□□□□ -1.99
Zic1-201ENSMUST00000034927 Krtap5-4Q62220 223 aa2.63□□□□□ -1.99
Zic1-201ENSMUST00000034927 Gm11567Q9D141 195 aa2.61□□□□□ -1.99
Zic1-201ENSMUST00000034927 Krtap21-1Q925H4 128 aa2.59□□□□□ -1.99
Zic1-201ENSMUST00000034927 Gm39115A0A1B0GSH7 232 aa2.55□□□□□ -2
Zic1-201ENSMUST00000034927 Gm45618A0A1B0GSA0 219 aa2.34□□□□□ -2.03
Zic1-201ENSMUST00000034927 Gm29735A0A1B0GT06 219 aa1.96□□□□□ -2.1
Zic1-201ENSMUST00000034927 Krtap5-1Q64507 230 aa1.72□□□□□ -2.13
Zic1-201ENSMUST00000034927 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 92.3 ms