RNA–Protein interactions for RNA: ENSMUST00000028382.12

Nup35-201, Transcript of Nucleoporin NUP53, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup35, Length 1,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35-201ENSMUST00000028382 Syne2Q6ZWQ0 6874 aaKnown RBP6.35□□□□□ -1.39
Nup35-201ENSMUST00000028382 Gm12216A0A1W2P827 62 aa6.34□□□□□ -1.39
Nup35-201ENSMUST00000028382 Mdn1A2ANY6 5589 aaKnown RBP6.34□□□□□ -1.39
Nup35-201ENSMUST00000028382 Camk2n1Q6QWF9 78 aa6.31□□□□□ -1.4
Nup35-201ENSMUST00000028382 Romo1P60603 79 aa6.29□□□□□ -1.4
Nup35-201ENSMUST00000028382 Krtap8-1O08633 61 aa6.22□□□□□ -1.41
Nup35-201ENSMUST00000028382 Gm11564A2A4L9 201 aa6.2□□□□□ -1.42
Nup35-201ENSMUST00000028382 Krtap4-8B1AQA8 209 aa6.2□□□□□ -1.42
Nup35-201ENSMUST00000028382 Krtap19-9bQ99NG9 58 aa6.18□□□□□ -1.42
Nup35-201ENSMUST00000028382 Krtap22-2J3QNX6 67 aa6.1□□□□□ -1.43
Nup35-201ENSMUST00000028382 SvipQ3UZP4 77 aa6.03□□□□□ -1.44
Nup35-201ENSMUST00000028382 Krtap9-3Q3V2C1 136 aa6.01□□□□□ -1.45
Nup35-201ENSMUST00000028382 Mt4P47945 62 aa5.97□□□□□ -1.45
Nup35-201ENSMUST00000028382 Krtap4-13Q9D7P3 165 aa5.81□□□□□ -1.48
Nup35-201ENSMUST00000028382 Krtap7-1Q9D3I6 87 aa5.78□□□□□ -1.48
Nup35-201ENSMUST00000028382 Fsip2A2ARZ3 6995 aa5.76□□□□□ -1.49
Nup35-201ENSMUST00000028382 Gm10153A0A1B0GRL1 320 aa5.72□□□□□ -1.49
Nup35-201ENSMUST00000028382 2300003K06RikA2A4M0 262 aa5.67□□□□□ -1.5
Nup35-201ENSMUST00000028382 Gm40193A0A1B0GT39 78 aa5.66□□□□□ -1.5
Nup35-201ENSMUST00000028382 Sprr2kO70562 68 aa5.63□□□□□ -1.51
Nup35-201ENSMUST00000028382 Tnp1P10856 55 aa5.61□□□□□ -1.51
Nup35-201ENSMUST00000028382 Krtap6-3A0A087WQL6 57 aa5.59□□□□□ -1.51
Nup35-201ENSMUST00000028382 Gm10272F7CZ33 110 aa5.48□□□□□ -1.53
Nup35-201ENSMUST00000028382 Krtap5-4Q62220 223 aa5.45□□□□□ -1.54
Nup35-201ENSMUST00000028382 Gm45337A0A1B0GS71 263 aa5.4□□□□□ -1.55
Nup35-201ENSMUST00000028382 Gm10142J3KMP7 120 aa5.38□□□□□ -1.55
Nup35-201ENSMUST00000028382 2310046K23RikA0A0A6YVW6 87 aa5.34□□□□□ -1.55
Nup35-201ENSMUST00000028382 Syne1Q6ZWR6 8799 aa5.34□□□□□ -1.56
Nup35-201ENSMUST00000028382 Mp68P56379 58 aa5.33□□□□□ -1.56
Nup35-201ENSMUST00000028382 Lce3bQ9CQM7 98 aa5.25□□□□□ -1.57
Nup35-201ENSMUST00000028382 Sprr2gO70558 76 aa5.21□□□□□ -1.58
Nup35-201ENSMUST00000028382 Krtap20-2E9Q0A8 60 aa5.2□□□□□ -1.58
Nup35-201ENSMUST00000028382 Gm11938Q9D3H4 131 aa5.16□□□□□ -1.58
Nup35-201ENSMUST00000028382 Sprr2iO70560 76 aa5.15□□□□□ -1.59
Nup35-201ENSMUST00000028382 Krtap5-2Q9D5Z7 189 aa5.13□□□□□ -1.59
Nup35-201ENSMUST00000028382 Gm11568A2A4M2 211 aa5.04□□□□□ -1.6
Nup35-201ENSMUST00000028382 Krtap9-1Q64526 186 aa5.04□□□□□ -1.6
Nup35-201ENSMUST00000028382 Sprr2dO70555 85 aa4.88□□□□□ -1.63
Nup35-201ENSMUST00000028382 Mt1P02802 61 aaKnown RBP4.87□□□□□ -1.63
Nup35-201ENSMUST00000028382 Lce3cQ91V05 98 aa4.83□□□□□ -1.64
Nup35-201ENSMUST00000028382 Gm4553A0A1B0GSA9 284 aa4.82□□□□□ -1.64
Nup35-201ENSMUST00000028382 Krtap19-4Q925H7 84 aa4.78□□□□□ -1.64
Nup35-201ENSMUST00000028382 Lce3dE9Q8V1 98 aa4.77□□□□□ -1.65
Nup35-201ENSMUST00000028382 Mt3P28184 68 aa4.76□□□□□ -1.65
Nup35-201ENSMUST00000028382 ObscnA2AAJ9 8891 aaKnown RBP4.71□□□□□ -1.66
Nup35-201ENSMUST00000028382 Lce3eF8VQJ0 98 aa4.69□□□□□ -1.66
Nup35-201ENSMUST00000028382 Lce3fQ6PAI4 98 aa4.69□□□□□ -1.66
Nup35-201ENSMUST00000028382 Eppk1Q8R0W0 6548 aa4.67□□□□□ -1.66
Nup35-201ENSMUST00000028382 Gm20538F6Z9R1 75 aa4.66□□□□□ -1.66
Nup35-201ENSMUST00000028382 Macf1Q9QXZ0 7354 aaKnown RBP4.6□□□□□ -1.67
Nup35-201ENSMUST00000028382 Gm40460A0A1B0GR10 244 aa4.55□□□□□ -1.68
Nup35-201ENSMUST00000028382 Gm7579A0A1B0GRJ4 243 aa4.55□□□□□ -1.68
Nup35-201ENSMUST00000028382 Krtap5-5Q2TA51 241 aa4.55□□□□□ -1.68
Nup35-201ENSMUST00000028382 Kmt2dQ6PDK2 5588 aa4.51□□□□□ -1.69
Nup35-201ENSMUST00000028382 Lce3aQ497I5 98 aa4.49□□□□□ -1.69
Nup35-201ENSMUST00000028382 Gm11639A0A1D5RLM8 5808 aa4.47□□□□□ -1.69
Nup35-201ENSMUST00000028382 4933428G20RikQ9D3X4 101 aa4.47□□□□□ -1.69
Nup35-201ENSMUST00000028382 Ndufaf8A2AMZ4 74 aa4.45□□□□□ -1.7
Nup35-201ENSMUST00000028382 Krtap5-1Q64507 230 aa4.4□□□□□ -1.7
Nup35-201ENSMUST00000028382 Hmcn1D3YXG0 5634 aa4.4□□□□□ -1.71
Nup35-201ENSMUST00000028382 Muc19Q6PZE0 7524 aa4.27□□□□□ -1.73
Nup35-201ENSMUST00000028382 Gpr98Q8VHN7 6298 aaKnown RBP4.26□□□□□ -1.73
Nup35-201ENSMUST00000028382 Sprr2hO70559 108 aa4.23□□□□□ -1.73
Nup35-201ENSMUST00000028382 Gm4559A4IF42 199 aa4.15□□□□□ -1.74
Nup35-201ENSMUST00000028382 DstQ91ZU6 7393 aaKnown RBP4.07□□□□□ -1.76
Nup35-201ENSMUST00000028382 Sprr2fO70557 76 aa3.93□□□□□ -1.78
Nup35-201ENSMUST00000028382 NebE9Q1W3 7152 aa3.92□□□□□ -1.78
Nup35-201ENSMUST00000028382 Sprr2eO70556 76 aa3.9□□□□□ -1.78
Nup35-201ENSMUST00000028382 Krtap4-16Q91W93 202 aa3.89□□□□□ -1.79
Nup35-201ENSMUST00000028382 AhnakE9Q616 5656 aaKnown RBP3.83□□□□□ -1.8
Nup35-201ENSMUST00000028382 Gm10024A0A0A0MQA4 119 aa3.83□□□□□ -1.8
Nup35-201ENSMUST00000028382 1110025L11RikO09048 78 aa3.58□□□□□ -1.84
Nup35-201ENSMUST00000028382 Krtap6-5Q925H3 78 aa3.58□□□□□ -1.84
Nup35-201ENSMUST00000028382 Gm9112A2AI92 75 aa3.55□□□□□ -1.84
Nup35-201ENSMUST00000028382 Muc16A0A140LJ72 8478 aa3.38□□□□□ -1.87
Nup35-201ENSMUST00000028382 Gm10229O08631 77 aa3.19□□□□□ -1.9
Nup35-201ENSMUST00000028382 Krtap21-1Q925H4 128 aa2.92□□□□□ -1.94
Nup35-201ENSMUST00000028382 Sprr2bO70554 98 aa2.91□□□□□ -1.94
Nup35-201ENSMUST00000028382 Krtap6-2O08884 159 aa2.78□□□□□ -1.96
Nup35-201ENSMUST00000028382 Phgr1Q8K0G7 91 aa2.52□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 19.5 ms