RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gm11596B1AQB0 205 aa3.73□□□□□ -1.81
Col7a1-201ENSMUST00000026740 Krtap4-1Q3UUY3 169 aa3.72□□□□□ -1.81
Col7a1-201ENSMUST00000026740 Ryr3A2AGL3 4863 aa3.71□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-16Q91W93 202 aa3.7□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Gm11564A2A4L9 201 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Gm11563B1AQ90 168 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Gm11595B1AQA7 289 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-8B1AQA8 209 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-9B1AQA9 244 aa3.66□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-13Q9D7P3 165 aa3.58□□□□□ -1.84
Col7a1-201ENSMUST00000026740 Syne2Q6ZWQ0 6874 aaKnown RBP3.57□□□□□ -1.84
Col7a1-201ENSMUST00000026740 Syne1Q6ZWR6 8799 aa3.54□□□□□ -1.84
Col7a1-201ENSMUST00000026740 Herc1E9PZP8 4859 aa3.51□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Krtap6-3A0A087WQL6 57 aa3.5□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Birc6O88738 4882 aa3.49□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Muc5bE9Q5I3 4800 aa3.47□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Kiaa1109A2AAE1 5005 aa3.47□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Mdn1A2ANY6 5589 aaKnown RBP3.35□□□□□ -1.87
Col7a1-201ENSMUST00000026740 ObscnA2AAJ9 8891 aaKnown RBP3.33□□□□□ -1.88
Col7a1-201ENSMUST00000026740 Ubr4A2AN08 5180 aa3.29□□□□□ -1.88
Col7a1-201ENSMUST00000026740 Gm11554B1AQB2 190 aa3.27□□□□□ -1.89
Col7a1-201ENSMUST00000026740 Hmcn2A2AJ76 5100 aa3.26□□□□□ -1.89
Col7a1-201ENSMUST00000026740 Abca13Q5SSE9 5034 aa3.22□□□□□ -1.89
Col7a1-201ENSMUST00000026740 Fsip2A2ARZ3 6995 aa3.2□□□□□ -1.9
Col7a1-201ENSMUST00000026740 4932415D10RikA0A1W2P6U8 4986 aa3.17□□□□□ -1.9
Col7a1-201ENSMUST00000026740 Krtap20-2E9Q0A8 60 aa3.11□□□□□ -1.91
Col7a1-201ENSMUST00000026740 HydinQ80W93 5154 aa3.1□□□□□ -1.91
Col7a1-201ENSMUST00000026740 Krtap17-1A2A5X6 109 aa3.08□□□□□ -1.92
Col7a1-201ENSMUST00000026740 1110025L11RikO09048 78 aa3.04□□□□□ -1.92
Col7a1-201ENSMUST00000026740 Krtap6-5Q925H3 78 aa3.04□□□□□ -1.92
Col7a1-201ENSMUST00000026740 Fat4Q2PZL6 4981 aa3.03□□□□□ -1.92
Col7a1-201ENSMUST00000026740 SspoQ8CG65 4998 aa3.02□□□□□ -1.93
Col7a1-201ENSMUST00000026740 Gm10229O08631 77 aa2.95□□□□□ -1.94
Col7a1-201ENSMUST00000026740 Rnf213E9Q555 5152 aaKnown RBP2.91□□□□□ -1.94
Col7a1-201ENSMUST00000026740 Ush2AQ2QI47 5193 aa2.83□□□□□ -1.96
Col7a1-201ENSMUST00000026740 Eppk1Q8R0W0 6548 aa2.82□□□□□ -1.96
Col7a1-201ENSMUST00000026740 Phgr1Q8K0G7 91 aa2.75□□□□□ -1.97
Col7a1-201ENSMUST00000026740 Kmt2dQ6PDK2 5588 aa2.74□□□□□ -1.97
Col7a1-201ENSMUST00000026740 Muc16A0A140LJ72 8478 aa2.64□□□□□ -1.99
Col7a1-201ENSMUST00000026740 Gm11555B1AQ89 175 aa2.59□□□□□ -1.99
Col7a1-201ENSMUST00000026740 Macf1Q9QXZ0 7354 aaKnown RBP2.52□□□□□ -2.01
Col7a1-201ENSMUST00000026740 DstQ91ZU6 7393 aaKnown RBP2.52□□□□□ -2.01
Col7a1-201ENSMUST00000026740 Gm11559Q9D3H7 191 aa2.47□□□□□ -2.01
Col7a1-201ENSMUST00000026740 Gm11567Q9D141 195 aa2.41□□□□□ -2.02
Col7a1-201ENSMUST00000026740 NebE9Q1W3 7152 aa2.39□□□□□ -2.03
Col7a1-201ENSMUST00000026740 Gm11568A2A4M2 211 aa2.35□□□□□ -2.03
Col7a1-201ENSMUST00000026740 Krtap9-1Q64526 186 aa2.35□□□□□ -2.03
Col7a1-201ENSMUST00000026740 Krtap6-2O08884 159 aa2.3□□□□□ -2.04
Col7a1-201ENSMUST00000026740 Gm11639A0A1D5RLM8 5808 aa2.26□□□□□ -2.05
Col7a1-201ENSMUST00000026740 Gpr98Q8VHN7 6298 aaKnown RBP2.25□□□□□ -2.05
Col7a1-201ENSMUST00000026740 Muc19Q6PZE0 7524 aa2.24□□□□□ -2.05
Col7a1-201ENSMUST00000026740 Krtap5-2Q9D5Z7 189 aa2.19□□□□□ -2.06
Col7a1-201ENSMUST00000026740 Hmcn1D3YXG0 5634 aa2.17□□□□□ -2.06
Col7a1-201ENSMUST00000026740 Krtap21-1Q925H4 128 aa2.04□□□□□ -2.08
Col7a1-201ENSMUST00000026740 Gm4553A0A1B0GSA9 284 aa1.99□□□□□ -2.09
Col7a1-201ENSMUST00000026740 Gm10153A0A1B0GRL1 320 aa1.89□□□□□ -2.11
Col7a1-201ENSMUST00000026740 A030005L19RikA0A1Y7VIU2 113 aa1.84□□□□□ -2.12
Col7a1-201ENSMUST00000026740 Gm2431E9Q8S1 172 aa1.77□□□□□ -2.13
Col7a1-201ENSMUST00000026740 Gm45337A0A1B0GS71 263 aa1.75□□□□□ -2.13
Col7a1-201ENSMUST00000026740 Gm40460A0A1B0GR10 244 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Gm7579A0A1B0GRJ4 243 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Krtap5-5Q2TA51 241 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Krtap5-4Q62220 223 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Gm39115A0A1B0GSH7 232 aa1.68□□□□□ -2.14
Col7a1-201ENSMUST00000026740 AhnakE9Q616 5656 aaKnown RBP1.66□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Gm29735A0A1B0GT06 219 aa1.36□□□□□ -2.19
Col7a1-201ENSMUST00000026740 A0A1Y7VJH8 109 aa1.35□□□□□ -2.19
Col7a1-201ENSMUST00000026740 Gm45618A0A1B0GSA0 219 aa1.33□□□□□ -2.2
Col7a1-201ENSMUST00000026740 A0A1Y7VLE6 161 aa1.12□□□□□ -2.23
Col7a1-201ENSMUST00000026740 Krtap5-1Q64507 230 aa1.04□□□□□ -2.24
Col7a1-201ENSMUST00000026740 Gm4559A4IF42 199 aa0.6□□□□□ -2.31
Col7a1-201ENSMUST00000026740 A030014E15RikA0A1Y7VJV2 120 aa0.42□□□□□ -2.34
Col7a1-201ENSMUST00000026740 A0A1Y7VJ07 166 aa0.39□□□□□ -2.35
Col7a1-201ENSMUST00000026740 A0A286YCP9 139 aa0.32□□□□□ -2.36
Col7a1-201ENSMUST00000026740 Krtap28-13A0A087WQP5 138 aa0.1□□□□□ -2.39
Col7a1-201ENSMUST00000026740 A030003K21RikA0A1Y7VIM3 128 aa0.1□□□□□ -2.39
Col7a1-201ENSMUST00000026740 Gm6217A0A1Y7VJK9 128 aa0.1□□□□□ -2.39
Col7a1-201ENSMUST00000026740 Krtap28-10A0A1Y7VP58 119 aa-0.02□□□□□ -2.41
Col7a1-201ENSMUST00000026740 A030005K14RikA0A1Y7VNY1 122 aa-0.03□□□□□ -2.41
Col7a1-201ENSMUST00000026740 Gm7544A0A1Y7VJ58 118 aa-0.18□□□□□ -2.44
Retrieved 80 of 22,080 RNA–protein pairs in 130 ms