RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 ECI1Q05871 280 aa1.1□□□□□ -2.23
snR48snR48 CBP1P07252 654 aa1.09□□□□□ -2.23
snR48snR48 SES1P07284 462 aaKnown RBP1.09□□□□□ -2.23
snR48snR48 AEP2P22136 580 aa1.09□□□□□ -2.23
snR48snR48 PTC6P25646 442 aa1.09□□□□□ -2.23
snR48snR48 OAF3P36023 863 aa1.09□□□□□ -2.23
snR48snR48 STB5P38699 743 aa1.09□□□□□ -2.23
snR48snR48 HXT6P39003 570 aaKnown RBP1.09□□□□□ -2.23
snR48snR48 HXT7P39004 570 aa1.09□□□□□ -2.23
snR48snR48 PEA2P40091 420 aa1.09□□□□□ -2.23
snR48snR48 UBP8P50102 471 aa1.09□□□□□ -2.23
snR48snR48 COS12P53053 380 aa1.09□□□□□ -2.23
snR48snR48 ORC1P54784 914 aaPredicted RBP1.09□□□□□ -2.23
snR48snR48 PTA1Q01329 785 aaPredicted RBP1.09□□□□□ -2.23
snR48snR48 ECM9Q02202 377 aa1.09□□□□□ -2.23
snR48snR48 ARP9Q05123 467 aa1.09□□□□□ -2.23
snR48snR48 THI3Q07471 609 aa1.09□□□□□ -2.23
snR48snR48 YDL012CQ12489 107 aa1.09□□□□□ -2.23
snR48snR48 YOL098CQ12496 1037 aa1.09□□□□□ -2.23
snR48snR48 BAR1P12630 587 aa1.08□□□□□ -2.24
snR48snR48 YCR006CP25350 157 aa1.08□□□□□ -2.24
snR48snR48 MGR1P25573 417 aa1.08□□□□□ -2.24
snR48snR48 VBA2P38358 474 aaKnown RBP1.08□□□□□ -2.24
snR48snR48 ARO9P38840 513 aaPredicted RBP1.08□□□□□ -2.24
snR48snR48 VPS41P38959 992 aa1.08□□□□□ -2.24
snR48snR48 GSM1P42950 618 aa1.08□□□□□ -2.24
snR48snR48 ATG27P46989 271 aa1.08□□□□□ -2.24
snR48snR48 YJR096WP47137 282 aa1.08□□□□□ -2.24
snR48snR48 YGL242CP53066 181 aa1.08□□□□□ -2.24
snR48snR48 PEF1P53238 335 aa1.08□□□□□ -2.24
snR48snR48 YNL234WP53857 426 aa1.08□□□□□ -2.24
snR48snR48 SMA1Q02651 245 aa1.08□□□□□ -2.24
snR48snR48 RPN4Q03465 531 aa1.08□□□□□ -2.24
snR48snR48 FPR4Q06205 392 aaPredicted RBP1.08□□□□□ -2.24
snR48snR48 DAP1Q12091 152 aa1.08□□□□□ -2.24
snR48snR48 RPS21AP0C0V8 87 aaKnown RBP1.07□□□□□ -2.24
snR48snR48 NAT1P12945 854 aaKnown RBP1.07□□□□□ -2.24
snR48snR48 HXT4P32467 576 aa1.07□□□□□ -2.24
snR48snR48 SIP1P32578 815 aa1.07□□□□□ -2.24
snR48snR48 OCT1P35999 772 aa1.07□□□□□ -2.24
snR48snR48 RIM2P38127 377 aa1.07□□□□□ -2.24
snR48snR48 MGS1P40151 587 aa1.07□□□□□ -2.24
snR48snR48 BUD6P41697 788 aa1.07□□□□□ -2.24
snR48snR48 IDS2P46958 469 aa1.07□□□□□ -2.24
snR48snR48 NNF1P47149 201 aa1.07□□□□□ -2.24
snR48snR48 YPR003CP53394 754 aa1.07□□□□□ -2.24
snR48snR48 POB3Q04636 552 aaKnown RBP1.07□□□□□ -2.24
snR48snR48 NGL1Q08213 363 aaKnown RBP1.07□□□□□ -2.24
snR48snR48 MCH4Q08268 501 aa1.07□□□□□ -2.24
snR48snR48 FRE3Q08905 711 aa1.07□□□□□ -2.24
snR48snR48 PPT2Q12036 173 aa1.07□□□□□ -2.24
snR48snR48 HFI1Q12060 488 aa1.07□□□□□ -2.24
snR48snR48 YLL056CQ12177 298 aa1.07□□□□□ -2.24
snR48snR48 ARG1P22768 420 aa1.06□□□□□ -2.24
snR48snR48 RPN2P32565 945 aaKnown RBP1.06□□□□□ -2.24
snR48snR48 RPF2P36160 344 aaKnown RBP1.06□□□□□ -2.24
snR48snR48 TPA1P40032 644 aaKnown RBP1.06□□□□□ -2.24
snR48snR48 IML2P47031 731 aa1.06□□□□□ -2.24
snR48snR48 NOP7P53261 605 aaKnown RBP1.06□□□□□ -2.24
snR48snR48 YPL191CQ08930 360 aa1.06□□□□□ -2.24
snR48snR48 LEA1Q08963 238 aaPredicted RBP1.06□□□□□ -2.24
snR48snR48 FAP7Q12055 197 aaPredicted RBP1.06□□□□□ -2.24
snR48snR48 GUK1P15454 187 aaKnown RBP1.05□□□□□ -2.24
snR48snR48 CWH43P25618 953 aa1.05□□□□□ -2.24
snR48snR48 MSH1P25846 959 aa1.05□□□□□ -2.24
snR48snR48 RNH70P53331 553 aa1.05□□□□□ -2.24
snR48snR48 CAC2Q04199 468 aa1.05□□□□□ -2.24
snR48snR48 BSC1Q12140 328 aa1.05□□□□□ -2.24
snR48snR48 RPS2P25443 254 aaKnown RBP1.04□□□□□ -2.24
snR48snR48 TYS1P36421 394 aaKnown RBP1.04□□□□□ -2.24
snR48snR48 CDC1P40986 491 aa1.04□□□□□ -2.24
snR48snR48 YNL181WP53878 407 aa1.04□□□□□ -2.24
snR48snR48 SWF1Q04629 336 aa1.04□□□□□ -2.24
snR48snR48 CRF1Q04930 467 aa1.04□□□□□ -2.24
snR48snR48 PIG1Q06216 648 aa1.04□□□□□ -2.24
snR48snR48 DIN7Q12086 430 aa1.04□□□□□ -2.24
snR48snR48 HOS1Q12214 470 aa1.04□□□□□ -2.24
snR48snR48 KGD2P19262 463 aaPredicted RBP1.03□□□□□ -2.24
snR48snR48 PDR3P33200 976 aa1.03□□□□□ -2.24
snR48snR48 GZF3P42944 551 aaKnown RBP1.03□□□□□ -2.24
snR48snR48 RNR4P49723 345 aaKnown RBP1.03□□□□□ -2.24
snR48snR48 UTP21Q06078 939 aaPredicted RBP1.03□□□□□ -2.24
snR48snR48 PSR2Q07949 397 aa1.03□□□□□ -2.24
snR48snR48 NOP56Q12460 504 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
snR48snR48 VPS5Q92331 675 aa1.03□□□□□ -2.24
snR48snR48 APM4Q99186 491 aa1.03□□□□□ -2.24
snR48snR48 YER145C-AA0A023PYF4 145 aa1.02□□□□□ -2.25
snR48snR48 URA3P03962 267 aa1.02□□□□□ -2.25
snR48snR48 ATP12P22135 325 aa1.02□□□□□ -2.25
snR48snR48 PRE2P30656 287 aaKnown RBP1.02□□□□□ -2.25
snR48snR48 SWC3P31376 625 aa1.02□□□□□ -2.25
snR48snR48 DID4P36108 232 aa1.02□□□□□ -2.25
snR48snR48 MNN11P46985 422 aaKnown RBP1.02□□□□□ -2.25
snR48snR48 NPA3P47122 385 aa1.02□□□□□ -2.25
snR48snR48 EAF7P53911 425 aaKnown RBP1.02□□□□□ -2.25
snR48snR48 YOR378WQ08902 515 aa1.02□□□□□ -2.25
snR48snR48 SUI3P09064 285 aaKnown RBP1.01□□□□□ -2.25
snR48snR48 YCR061WP25639 631 aa1.01□□□□□ -2.25
snR48snR48 SRP68P38687 599 aaKnown RBP1.01□□□□□ -2.25
snR48snR48 ERC1P38767 581 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms