RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W PES4P39684 611 aa1.85□□□□□ -2.11
CTF4YPR135W OAF1P39720 1047 aaPredicted RBP1.85□□□□□ -2.11
CTF4YPR135W CSM2P40465 213 aa1.85□□□□□ -2.11
CTF4YPR135W MNT3P40549 630 aa1.85□□□□□ -2.11
CTF4YPR135W ALG2P43636 503 aa1.85□□□□□ -2.11
CTF4YPR135W MOT3P54785 490 aaKnown RBP1.85□□□□□ -2.11
CTF4YPR135W SNP1Q00916 300 aaPredicted RBP1.85□□□□□ -2.11
CTF4YPR135W YKR011CQ02209 353 aa1.85□□□□□ -2.11
CTF4YPR135W YPR071WQ12346 211 aa1.85□□□□□ -2.11
CTF4YPR135W OPI1P21957 404 aa1.84□□□□□ -2.11
CTF4YPR135W MIH1P23748 554 aa1.84□□□□□ -2.11
CTF4YPR135W DMC1P25453 334 aa1.84□□□□□ -2.11
CTF4YPR135W RPN10P38886 268 aaKnown RBP1.84□□□□□ -2.11
CTF4YPR135W DOT6P40059 670 aaKnown RBP1.84□□□□□ -2.11
CTF4YPR135W GYP8P43570 497 aa1.84□□□□□ -2.11
CTF4YPR135W GAT1P43574 510 aa1.84□□□□□ -2.11
CTF4YPR135W NOG2P53742 486 aaKnown RBP1.84□□□□□ -2.11
CTF4YPR135W APM1Q00776 475 aaPredicted RBP1.84□□□□□ -2.11
CTF4YPR135W NSE5Q03718 556 aa1.84□□□□□ -2.11
CTF4YPR135W HFD1Q04458 532 aa1.84□□□□□ -2.11
CTF4YPR135W PSR1Q07800 427 aa1.84□□□□□ -2.11
CTF4YPR135W PSK2Q08217 1101 aa1.84□□□□□ -2.11
CTF4YPR135W HOM3P10869 527 aa1.84□□□□□ -2.12
CTF4YPR135W ADE2P21264 571 aaKnown RBP1.84□□□□□ -2.12
CTF4YPR135W PRD1P25375 712 aa1.84□□□□□ -2.12
CTF4YPR135W TFB1P32776 642 aa1.84□□□□□ -2.12
CTF4YPR135W ORC2P32833 620 aa1.84□□□□□ -2.12
CTF4YPR135W MRS6P32864 603 aaKnown RBP1.84□□□□□ -2.12
CTF4YPR135W SPC29P33419 253 aa1.84□□□□□ -2.12
CTF4YPR135W MNN4P36044 1178 aa1.84□□□□□ -2.12
CTF4YPR135W PCM1P38628 557 aaKnown RBP1.84□□□□□ -2.12
CTF4YPR135W YHL026CP38740 315 aa1.84□□□□□ -2.12
CTF4YPR135W PTI1P39927 425 aaPredicted RBP1.84□□□□□ -2.12
CTF4YPR135W SIT1P39980 628 aa1.84□□□□□ -2.12
CTF4YPR135W HIS6P40545 261 aa1.84□□□□□ -2.12
CTF4YPR135W SAD1P43589 448 aa1.84□□□□□ -2.12
CTF4YPR135W AIM14P53109 570 aa1.84□□□□□ -2.12
CTF4YPR135W SPO1P53541 631 aa1.84□□□□□ -2.12
CTF4YPR135W TRS130Q03660 1102 aa1.84□□□□□ -2.12
CTF4YPR135W COG8Q04632 607 aa1.84□□□□□ -2.12
CTF4YPR135W YDR338CQ05497 695 aa1.84□□□□□ -2.12
CTF4YPR135W MLC2Q06580 163 aa1.84□□□□□ -2.12
CTF4YPR135W SDH5Q08230 162 aa1.84□□□□□ -2.12
CTF4YPR135W CDC31P06704 161 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W RPS21AP0C0V8 87 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W HEM12P32347 362 aaPredicted RBP1.83□□□□□ -2.12
CTF4YPR135W PRP19P32523 503 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W WBP1P33767 430 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W STO1P34160 861 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W BLI1P35727 113 aa1.83□□□□□ -2.12
CTF4YPR135W YJL206CP39529 758 aa1.83□□□□□ -2.12
CTF4YPR135W SAP185P40856 1058 aa1.83□□□□□ -2.12
CTF4YPR135W QRI7P43122 407 aa1.83□□□□□ -2.12
CTF4YPR135W DUG1P43616 481 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W AMA1P50082 593 aa1.83□□□□□ -2.12
CTF4YPR135W TAD1P53065 400 aa1.83□□□□□ -2.12
CTF4YPR135W RSC1P53236 928 aa1.83□□□□□ -2.12
CTF4YPR135W MEP3P53390 489 aa1.83□□□□□ -2.12
CTF4YPR135W ASI2P53895 289 aa1.83□□□□□ -2.12
CTF4YPR135W CEG1Q01159 459 aaPredicted RBP1.83□□□□□ -2.12
CTF4YPR135W PDS5Q04264 1277 aa1.83□□□□□ -2.12
CTF4YPR135W ECM38Q05902 660 aaPredicted RBP1.83□□□□□ -2.12
CTF4YPR135W PCD1Q12524 340 aa1.83□□□□□ -2.12
CTF4YPR135W UBC1P21734 215 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W EMP70P32802 667 aa1.83□□□□□ -2.12
CTF4YPR135W BEM3P32873 1128 aa1.83□□□□□ -2.12
CTF4YPR135W RPS0AP32905 252 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W EMC3P36039 253 aa1.83□□□□□ -2.12
CTF4YPR135W CKB2P38930 258 aa1.83□□□□□ -2.12
CTF4YPR135W SHR5P41912 237 aa1.83□□□□□ -2.12
CTF4YPR135W SSL2Q00578 843 aa1.83□□□□□ -2.12
CTF4YPR135W ECM9Q02202 377 aa1.83□□□□□ -2.12
CTF4YPR135W MEH1Q02205 184 aa1.83□□□□□ -2.12
CTF4YPR135W ASM4Q05166 528 aa1.83□□□□□ -2.12
CTF4YPR135W RPN7Q06103 429 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W RLP24Q07915 199 aaKnown RBP1.83□□□□□ -2.12
CTF4YPR135W RAD61Q99359 647 aa1.83□□□□□ -2.12
CTF4YPR135W INH1P01097 85 aa1.82□□□□□ -2.12
CTF4YPR135W CHO2P05374 869 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W HMG1P12683 1054 aa1.82□□□□□ -2.12
CTF4YPR135W AEP2P22136 580 aa1.82□□□□□ -2.12
CTF4YPR135W PGS1P25578 521 aa1.82□□□□□ -2.12
CTF4YPR135W URA1P28272 314 aaPredicted RBP1.82□□□□□ -2.12
CTF4YPR135W SWC3P31376 625 aa1.82□□□□□ -2.12
CTF4YPR135W IMP2'P32351 346 aa1.82□□□□□ -2.12
CTF4YPR135W NGG1P32494 702 aa1.82□□□□□ -2.12
CTF4YPR135W RAD24P32641 659 aa1.82□□□□□ -2.12
CTF4YPR135W CCL1P37366 393 aa1.82□□□□□ -2.12
CTF4YPR135W HXT6P39003 570 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W HXT7P39004 570 aa1.82□□□□□ -2.12
CTF4YPR135W YEL025CP39991 1188 aa1.82□□□□□ -2.12
CTF4YPR135W CCT7P42943 550 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W UPF3P48412 387 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W NRG1Q03125 231 aa1.82□□□□□ -2.12
CTF4YPR135W RIM13Q03792 727 aa1.82□□□□□ -2.12
CTF4YPR135W PHM6Q05637 104 aa1.82□□□□□ -2.12
CTF4YPR135W ATG33Q06485 197 aa1.82□□□□□ -2.12
CTF4YPR135W MED1Q12321 566 aa1.82□□□□□ -2.12
CTF4YPR135W ATP1P07251 545 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W PEX34P25584 144 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms