RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	SCW4	P53334	386 aa	Known RBP	4.13	□□□□□ -1.75
SME1	YOR159C	YNL034W	P53963	612 aa		4.13	□□□□□ -1.75
SME1	YOR159C	YML119W	Q03208	357 aa		4.13	□□□□□ -1.75
SME1	YOR159C	RAD33	Q04231	177 aa		4.13	□□□□□ -1.75
SME1	YOR159C	NUM1	Q00402	2748 aa		4.12	□□□□□ -1.75
SME1	YOR159C	YUR1	P26725	428 aa		4.12	□□□□□ -1.75
SME1	YOR159C	LAS21	P40367	830 aa		4.12	□□□□□ -1.75
SME1	YOR159C	COG2	P53271	262 aa		4.12	□□□□□ -1.75
SME1	YOR159C	ENT2	Q05785	613 aa		4.12	□□□□□ -1.75
SME1	YOR159C	TMA7	Q3E764	64 aa	Known RBP	4.12	□□□□□ -1.75
SME1	YOR159C	ADH4	P10127	382 aa		4.11	□□□□□ -1.75
SME1	YOR159C	RPS7A	P26786	190 aa	Known RBP	4.11	□□□□□ -1.75
SME1	YOR159C	PRE2	P30656	287 aa	Known RBP	4.11	□□□□□ -1.75
SME1	YOR159C	NIC96	P34077	839 aa		4.11	□□□□□ -1.75
SME1	YOR159C	TOM20	P35180	183 aa		4.11	□□□□□ -1.75
SME1	YOR159C	YLF2	P38746	405 aa		4.11	□□□□□ -1.75
SME1	YOR159C	JHD1	P40034	492 aa		4.11	□□□□□ -1.75
SME1	YOR159C	MAM1	P40065	302 aa		4.11	□□□□□ -1.75
SME1	YOR159C	AAT1	Q01802	451 aa		4.11	□□□□□ -1.75
SME1	YOR159C	TRS31	Q03337	283 aa		4.11	□□□□□ -1.75
SME1	YOR159C	HER1	Q12276	1246 aa		4.11	□□□□□ -1.75
SME1	YOR159C	YER175W-A	Q8TGU4	54 aa		4.11	□□□□□ -1.75
SME1	YOR159C	PNO1	Q99216	274 aa	Known RBP	4.11	□□□□□ -1.75
SME1	YOR159C	MPD2	Q99316	277 aa		4.11	□□□□□ -1.75
SME1	YOR159C	Q0010	Q9ZZX9	128 aa		4.11	□□□□□ -1.75
SME1	YOR159C	ASK1	P35734	292 aa		4.1	□□□□□ -1.75
SME1	YOR159C	GRX7	P38068	203 aa		4.1	□□□□□ -1.75
SME1	YOR159C	SWD1	P39706	426 aa		4.1	□□□□□ -1.75
SME1	YOR159C	PCI8	P40512	444 aa		4.1	□□□□□ -1.75
SME1	YOR159C	YIL024C	P40543	189 aa		4.1	□□□□□ -1.75
SME1	YOR159C	IMA5	P40884	581 aa		4.1	□□□□□ -1.75
SME1	YOR159C	MEP2	P41948	499 aa		4.1	□□□□□ -1.75
SME1	YOR159C	POL31	P46957	487 aa		4.1	□□□□□ -1.75
SME1	YOR159C	PUS4	P48567	403 aa	Known RBP	4.1	□□□□□ -1.75
SME1	YOR159C	ACS1	Q01574	713 aa		4.1	□□□□□ -1.75
SME1	YOR159C	UBP16	Q02863	499 aa		4.1	□□□□□ -1.75
SME1	YOR159C	VPS64	Q03944	604 aa		4.1	□□□□□ -1.75
SME1	YOR159C	CRD1	Q07560	283 aa		4.1	□□□□□ -1.75
SME1	YOR159C	AMD2	P22580	549 aa		4.09	□□□□□ -1.75
SME1	YOR159C	RRP43	P25359	394 aa	Predicted RBP	4.09	□□□□□ -1.75
SME1	YOR159C	PRP45	P28004	379 aa	Predicted RBP	4.09	□□□□□ -1.75
SME1	YOR159C	IMD2	P38697	523 aa	Known RBP	4.09	□□□□□ -1.75
SME1	YOR159C	IMD3	P50095	523 aa	Known RBP	4.09	□□□□□ -1.75
SME1	YOR159C	TAN1	P53072	289 aa	Predicted RBP	4.09	□□□□□ -1.75
SME1	YOR159C	YNL058C	P53947	316 aa		4.09	□□□□□ -1.75
SME1	YOR159C	CRF1	Q04930	467 aa		4.09	□□□□□ -1.75
SME1	YOR159C	ARP7	Q12406	477 aa		4.09	□□□□□ -1.75
SME1	YOR159C	TOM1	Q03280	3268 aa		4.09	□□□□□ -1.76
SME1	YOR159C	CHO2	P05374	869 aa	Known RBP	4.08	□□□□□ -1.76
SME1	YOR159C	YER190C-B	P0CX94	160 aa		4.08	□□□□□ -1.76
SME1	YOR159C	YEL077W-A	P0CX95	160 aa		4.08	□□□□□ -1.76
SME1	YOR159C	YGR296C-B	P0CX96	160 aa		4.08	□□□□□ -1.76
SME1	YOR159C	YPL283W-B	P0CX97	160 aa		4.08	□□□□□ -1.76
SME1	YOR159C	YPR204C-A	P0CX98	160 aa		4.08	□□□□□ -1.76
SME1	YOR159C	YCR061W	P25639	631 aa		4.08	□□□□□ -1.76
SME1	YOR159C	FLO5	P38894	1075 aa		4.08	□□□□□ -1.76
SME1	YOR159C	IRC7	P43623	340 aa		4.08	□□□□□ -1.76
SME1	YOR159C	STB2	P46679	850 aa		4.08	□□□□□ -1.76
SME1	YOR159C	PEX8	P53248	589 aa		4.08	□□□□□ -1.76
SME1	YOR159C	TGL2	P54857	326 aa		4.08	□□□□□ -1.76
SME1	YOR159C	YML053C	Q04978	212 aa		4.08	□□□□□ -1.76
SME1	YOR159C	AAD4	Q07747	329 aa		4.08	□□□□□ -1.76
SME1	YOR159C	RTC1	Q08281	1341 aa		4.08	□□□□□ -1.76
SME1	YOR159C	ARB1	P40024	610 aa	Known RBP	4.07	□□□□□ -1.76
SME1	YOR159C	RAD26	P40352	1085 aa		4.07	□□□□□ -1.76
SME1	YOR159C	CIR1	P42940	261 aa		4.07	□□□□□ -1.76
SME1	YOR159C	COP1	P53622	1201 aa	Known RBP	4.07	□□□□□ -1.76
SME1	YOR159C	CEG1	Q01159	459 aa	Predicted RBP	4.07	□□□□□ -1.76
SME1	YOR159C	SNU56	Q03782	492 aa	Known RBP	4.07	□□□□□ -1.76
SME1	YOR159C	PLM2	Q04383	521 aa		4.07	□□□□□ -1.76
SME1	YOR159C	YDL242W	Q07746	117 aa		4.07	□□□□□ -1.76
SME1	YOR159C	YOL114C	Q12322	202 aa		4.07	□□□□□ -1.76
SME1	YOR159C	TOP2	P06786	1428 aa	Known RBP	4.06	□□□□□ -1.76
SME1	YOR159C	YPR089W	O13585	888 aa		4.06	□□□□□ -1.76
SME1	YOR159C	YKL133C	P36066	463 aa		4.06	□□□□□ -1.76
SME1	YOR159C	ARO9	P38840	513 aa	Predicted RBP	4.06	□□□□□ -1.76
SME1	YOR159C	VPS8	P39702	1274 aa		4.06	□□□□□ -1.76
SME1	YOR159C	YOR389W	Q08912	624 aa		4.06	□□□□□ -1.76
SME1	YOR159C	MLP2	P40457	1679 aa		4.06	□□□□□ -1.76
SME1	YOR159C	BUD3	P25558	1636 aa		4.06	□□□□□ -1.76
SME1	YOR159C	YSP2	Q06681	1438 aa		4.05	□□□□□ -1.76
SME1	YOR159C	SST2	P11972	698 aa	Known RBP	4.05	□□□□□ -1.76
SME1	YOR159C	MAK32	P23060	363 aa		4.05	□□□□□ -1.76
SME1	YOR159C	SWC3	P31376	625 aa		4.05	□□□□□ -1.76
SME1	YOR159C	SIP1	P32578	815 aa		4.05	□□□□□ -1.76
SME1	YOR159C	PXL1	P36166	706 aa		4.05	□□□□□ -1.76
SME1	YOR159C	FTH1	P38310	465 aa		4.05	□□□□□ -1.76
SME1	YOR159C	SPC97	P38863	823 aa		4.05	□□□□□ -1.76
SME1	YOR159C	YMR124W	P39523	943 aa	Known RBP	4.05	□□□□□ -1.76
SME1	YOR159C	SAP1	P39955	897 aa	Known RBP	4.05	□□□□□ -1.76
SME1	YOR159C	MAD3	P47074	515 aa		4.05	□□□□□ -1.76
SME1	YOR159C	LCB4	Q12246	624 aa		4.05	□□□□□ -1.76
SME1	YOR159C	SNT2	P53127	1403 aa		4.04	□□□□□ -1.76
SME1	YOR159C	GAL4	P04386	881 aa		4.04	□□□□□ -1.76
SME1	YOR159C	KGD2	P19262	463 aa	Predicted RBP	4.04	□□□□□ -1.76
SME1	YOR159C	COQ3	P27680	312 aa		4.04	□□□□□ -1.76
SME1	YOR159C	RPF2	P36160	344 aa	Known RBP	4.04	□□□□□ -1.76
SME1	YOR159C	CIN1	P40987	1014 aa		4.04	□□□□□ -1.76
SME1	YOR159C	ESF2	P53743	316 aa	Known RBP	4.04	□□□□□ -1.76
SME1	YOR159C	TEP1	P53916	434 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 118.4 ms