RNA–Protein interactions for RNA: YOL067C

RTG1, Transcript of Transcription factor (bHLH) involved in interorganelle communication, yeast

Gene RTG1, Length 534 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG1	YOL067C	BLI1	P35727	113 aa		11.52	□□□□□ -0.57
RTG1	YOL067C	PCA1	P38360	1216 aa		11.52	□□□□□ -0.57
RTG1	YOL067C	SET2	P46995	733 aa	Known RBP	11.52	□□□□□ -0.57
RTG1	YOL067C	PPN1	Q04119	674 aa		11.52	□□□□□ -0.57
RTG1	YOL067C	SRO7	Q12038	1033 aa		11.52	□□□□□ -0.57
RTG1	YOL067C	RAD10	P06838	210 aa		11.51	□□□□□ -0.57
RTG1	YOL067C	POL30	P15873	258 aa	Known RBP	11.51	□□□□□ -0.57
RTG1	YOL067C	PAT1	P25644	796 aa	Known RBP	11.51	□□□□□ -0.57
RTG1	YOL067C	PMC1	P38929	1173 aa	Predicted RBP	11.51	□□□□□ -0.57
RTG1	YOL067C	ENT5	Q03769	411 aa	Known RBP	11.51	□□□□□ -0.57
RTG1	YOL067C	YDR131C	Q03899	556 aa		11.51	□□□□□ -0.57
RTG1	YOL067C	THI7	Q05998	598 aa		11.51	□□□□□ -0.57
RTG1	YOL067C	YBL055C	P34220	418 aa	Predicted RBP	11.5	□□□□□ -0.57
RTG1	YOL067C	UME6	P39001	836 aa		11.5	□□□□□ -0.57
RTG1	YOL067C	CTK3	P46963	296 aa	Predicted RBP	11.5	□□□□□ -0.57
RTG1	YOL067C	UTP5	Q04177	643 aa	Known RBP	11.5	□□□□□ -0.57
RTG1	YOL067C	ARP9	Q05123	467 aa		11.5	□□□□□ -0.57
RTG1	YOL067C	THI73	Q07904	523 aa		11.5	□□□□□ -0.57
RTG1	YOL067C	ALR1	Q08269	859 aa		11.5	□□□□□ -0.57
RTG1	YOL067C	STT4	P37297	1900 aa		11.5	□□□□□ -0.57
RTG1	YOL067C	PDR1	P12383	1068 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	SFL1	P20134	766 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	SLY1	P22213	666 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	KNS1	P32350	737 aa	Predicted RBP	11.49	□□□□□ -0.57
RTG1	YOL067C	SLD2	P34252	453 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	SPC72	P39723	622 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	ELO3	P40319	345 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	SIP4	P46954	829 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	GND2	P53319	492 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	NMA111	P53920	997 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	NGL3	Q03210	505 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	SOV1	Q04748	898 aa		11.49	□□□□□ -0.57
RTG1	YOL067C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	11.49	□□□□□ -0.57	not detected
RTG1	YOL067C	DCC1	P25559	380 aa		11.48	□□□□□ -0.57
RTG1	YOL067C	SFP1	P32432	683 aa		11.48	□□□□□ -0.57
RTG1	YOL067C	WBP1	P33767	430 aa	Known RBP	11.48	□□□□□ -0.57
RTG1	YOL067C	TFA2	P36145	328 aa		11.48	□□□□□ -0.57
RTG1	YOL067C	UBP14	P38237	781 aa	Known RBP	11.48	□□□□□ -0.57
RTG1	YOL067C	YHL041W	P38730	149 aa		11.48	□□□□□ -0.57
RTG1	YOL067C	LRP1	P38801	184 aa	Known RBP	11.48	□□□□□ -0.57
RTG1	YOL067C	TES1	P41903	349 aa	Known RBP	11.48	□□□□□ -0.57
RTG1	YOL067C	TEP1	P53916	434 aa		11.48	□□□□□ -0.57
RTG1	YOL067C	YIL046W-A	Q3E7Z4	54 aa		11.48	□□□□□ -0.57
RTG1	YOL067C	SBP1	P10080	294 aa	Known RBP	11.47	□□□□□ -0.57
RTG1	YOL067C	GAL11	P19659	1081 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	ROX1	P25042	368 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	RAD57	P25301	460 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	YBP1	P38315	674 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	STS1	P38637	319 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	IST3	P40565	148 aa	Predicted RBP	11.47	□□□□□ -0.57
RTG1	YOL067C	STR3	P53101	465 aa	Known RBP	11.47	□□□□□ -0.57
RTG1	YOL067C	BNA5	Q05979	453 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	AAD15	Q08361	143 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	AI5_ALPHA	Q9ZZX1	630 aa		11.47	□□□□□ -0.57
RTG1	YOL067C	GAL4	P04386	881 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	TUB1	P09733	447 aa	Known RBP	11.46	□□□□□ -0.57
RTG1	YOL067C	RED1	P14291	827 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	FET5	P43561	622 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	SWC4	P53201	476 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	LDB18	Q07887	179 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	DAS2	Q12084	232 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	YOR338W	Q99326	363 aa		11.46	□□□□□ -0.57
RTG1	YOL067C	YKR104W	P0CE69	306 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	11.45	□□□□□ -0.58	not detected
RTG1	YOL067C	UTR2	P32623	467 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	PHO11	P35842	467 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	PHO12	P38693	467 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	MSR1	P38714	643 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	TIM17	P39515	158 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	ARG2	P40360	574 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	KAP114	P53067	1004 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	YNL143C	P53908	130 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.45	□□□□□ -0.58	not detected
RTG1	YOL067C	YDR018C	Q12185	396 aa		11.45	□□□□□ -0.58
RTG1	YOL067C	YLR462W	O13556	202 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	GLN4	P13188	809 aa	Known RBP	11.44	□□□□□ -0.58
RTG1	YOL067C	SEC23	P15303	768 aa	Known RBP	11.44	□□□□□ -0.58
RTG1	YOL067C	CLN1	P20437	546 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	SNT1	P25357	1226 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	MUM2	P38236	366 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	YBR259W	P38338	688 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	SRP72	P38688	640 aa	Known RBP	11.44	□□□□□ -0.58
RTG1	YOL067C	YHL049C	P38722	271 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	ELO1	P39540	310 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	YAT2	P40017	923 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	SLX8	P40072	274 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	YFL064C	P43540	174 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	RGD2	P43556	714 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	BUD13	P46947	266 aa	Predicted RBP	11.44	□□□□□ -0.58
RTG1	YOL067C	YML6	P51998	286 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	PCL10	P53124	433 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	CDC14	Q00684	551 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	POB3	Q04636	552 aa	Known RBP	11.44	□□□□□ -0.58
RTG1	YOL067C	NRT1	Q08485	598 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	TRM8	Q12009	286 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	YBL111C	Q3E7Y5	667 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	YLR149C	Q99296	730 aa		11.44	□□□□□ -0.58
RTG1	YOL067C	TUB3	P09734	445 aa	Known RBP	11.43	□□□□□ -0.58
RTG1	YOL067C	PMS1	P14242	873 aa		11.43	□□□□□ -0.58
RTG1	YOL067C	UBA1	P22515	1024 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms