RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W VPS41P38959 992 aa8.35□□□□□ -1.07
YPT11YNL304W EXO1P39875 702 aa8.35□□□□□ -1.07
YPT11YNL304W SSP120P39931 234 aaKnown RBP8.35□□□□□ -1.07
YPT11YNL304W GYP8P43570 497 aa8.35□□□□□ -1.07
YPT11YNL304W ARH1P48360 493 aa8.35□□□□□ -1.07
YPT11YNL304W YVH1Q02256 364 aaKnown RBP8.35□□□□□ -1.07
YPT11YNL304W RPN9Q04062 393 aaKnown RBP8.35□□□□□ -1.07
YPT11YNL304W YDR344CQ05510 147 aa8.35□□□□□ -1.07
YPT11YNL304W YSH1Q06224 779 aaPredicted RBP8.35□□□□□ -1.07
YPT11YNL304W YET3Q07451 203 aa8.35□□□□□ -1.07
YPT11YNL304W ADY3Q07732 790 aa8.35□□□□□ -1.07
YPT11YNL304W OCA6Q12454 224 aa8.35□□□□□ -1.07
YPT11YNL304W SCH9P11792 824 aaKnown RBP8.34□□□□□ -1.07
YPT11YNL304W INO1P11986 533 aa8.34□□□□□ -1.07
YPT11YNL304W SIR1P21691 654 aa8.34□□□□□ -1.07
YPT11YNL304W RIM1P32445 135 aaKnown RBP8.34□□□□□ -1.07
YPT11YNL304W POL12P38121 705 aaPredicted RBP8.34□□□□□ -1.07
YPT11YNL304W LIN1P38852 340 aaPredicted RBP8.34□□□□□ -1.07
YPT11YNL304W RGI2P40188 164 aa8.34□□□□□ -1.07
YPT11YNL304W CHS6P40955 746 aa8.34□□□□□ -1.07
YPT11YNL304W SIP4P46954 829 aa8.34□□□□□ -1.07
YPT11YNL304W YGL140CP53120 1219 aa8.34□□□□□ -1.07
YPT11YNL304W LSC1P53598 329 aaKnown RBP8.34□□□□□ -1.07
YPT11YNL304W YNR065CP53751 1116 aa8.34□□□□□ -1.07
YPT11YNL304W SLT2Q00772 484 aa8.34□□□□□ -1.07
YPT11YNL304W REG1Q00816 1014 aa8.34□□□□□ -1.07
YPT11YNL304W NHX1Q04121 633 aa8.34□□□□□ -1.07
YPT11YNL304W YDR109CQ04585 715 aa8.34□□□□□ -1.07
YPT11YNL304W CMS1Q07897 291 aaKnown RBP8.34□□□□□ -1.07
YPT11YNL304W YLR053CQ12026 108 aa8.34□□□□□ -1.07
YPT11YNL304W PDH1Q12428 516 aaKnown RBP8.34□□□□□ -1.07
YPT11YNL304W ATP12P22135 325 aa8.33□□□□□ -1.08
YPT11YNL304W MRPL8P22353 238 aa8.33□□□□□ -1.08
YPT11YNL304W YSP3P25036 478 aa8.33□□□□□ -1.08
YPT11YNL304W DCC1P25559 380 aa8.33□□□□□ -1.08
YPT11YNL304W HEM3P28789 327 aa8.33□□□□□ -1.08
YPT11YNL304W HRR25P29295 494 aaKnown RBP8.33□□□□□ -1.08
YPT11YNL304W LIP5P32875 414 aa8.33□□□□□ -1.08
YPT11YNL304W LOS1P33418 1100 aaPredicted RBP8.33□□□□□ -1.08
YPT11YNL304W CTF13P35203 478 aa8.33□□□□□ -1.08
YPT11YNL304W SET3P36124 751 aa8.33□□□□□ -1.08
YPT11YNL304W MRP21P38175 177 aa8.33□□□□□ -1.08
YPT11YNL304W YJL206CP39529 758 aa8.33□□□□□ -1.08
YPT11YNL304W HEM14P40012 539 aa8.33□□□□□ -1.08
YPT11YNL304W YFL012WP43580 148 aa8.33□□□□□ -1.08
YPT11YNL304W LIA1P47120 325 aaKnown RBP8.33□□□□□ -1.08
YPT11YNL304W TEP1P53916 434 aa8.33□□□□□ -1.08
YPT11YNL304W PET117Q02771 107 aa8.33□□□□□ -1.08
YPT11YNL304W TRS31Q03337 283 aa8.33□□□□□ -1.08
YPT11YNL304W TMN2Q04562 672 aa8.33□□□□□ -1.08
YPT11YNL304W CDC123Q05791 360 aa8.33□□□□□ -1.08
YPT11YNL304W TRE2Q08693 809 aa8.33□□□□□ -1.08
YPT11YNL304W NDD1Q08887 554 aa8.33□□□□□ -1.08
YPT11YNL304W PEX11Q12462 236 aa8.33□□□□□ -1.08
YPT11YNL304W RPS9AO13516 197 aaKnown RBP8.32□□□□□ -1.08
YPT11YNL304W BET2P20133 325 aa8.32□□□□□ -1.08
YPT11YNL304W RBK1P25332 333 aa8.32□□□□□ -1.08
YPT11YNL304W SGF29P25554 259 aa8.32□□□□□ -1.08
YPT11YNL304W IMG2P25642 146 aaPredicted RBP8.32□□□□□ -1.08
YPT11YNL304W RRP14P36080 434 aaKnown RBP8.32□□□□□ -1.08
YPT11YNL304W RDH54P38086 958 aa8.32□□□□□ -1.08
YPT11YNL304W MED6P38782 295 aa8.32□□□□□ -1.08
YPT11YNL304W MEF2P39677 819 aa8.32□□□□□ -1.08
YPT11YNL304W SLX8P40072 274 aa8.32□□□□□ -1.08
YPT11YNL304W BUD13P46947 266 aaPredicted RBP8.32□□□□□ -1.08
YPT11YNL304W AMA1P50082 593 aa8.32□□□□□ -1.08
YPT11YNL304W STR3P53101 465 aaKnown RBP8.32□□□□□ -1.08
YPT11YNL304W AIM14P53109 570 aa8.32□□□□□ -1.08
YPT11YNL304W BIO4P53630 237 aa8.32□□□□□ -1.08
YPT11YNL304W PML39Q03760 334 aa8.32□□□□□ -1.08
YPT11YNL304W TAF11Q04226 346 aa8.32□□□□□ -1.08
YPT11YNL304W YPR114WQ06107 315 aa8.32□□□□□ -1.08
YPT11YNL304W RSC2Q06488 889 aa8.32□□□□□ -1.08
YPT11YNL304W SGO1Q08490 590 aa8.32□□□□□ -1.08
YPT11YNL304W CLP1Q08685 445 aaPredicted RBP8.32□□□□□ -1.08
YPT11YNL304W YLR046CQ12253 270 aa8.32□□□□□ -1.08
YPT11YNL304W KCS1Q12494 1050 aa8.32□□□□□ -1.08
YPT11YNL304W ERG20P08524 352 aaKnown RBP8.31□□□□□ -1.08
YPT11YNL304W HSF1P10961 833 aa8.31□□□□□ -1.08
YPT11YNL304W ACO1P19414 778 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
YPT11YNL304W CLN1P20437 546 aa8.31□□□□□ -1.08
YPT11YNL304W KIN3P22209 435 aa8.31□□□□□ -1.08
YPT11YNL304W AAT2P23542 418 aaKnown RBP8.31□□□□□ -1.08
YPT11YNL304W CDC10P25342 322 aaKnown RBP8.31□□□□□ -1.08
YPT11YNL304W EMC1P25574 760 aa8.31□□□□□ -1.08
YPT11YNL304W MSH1P25846 959 aa8.31□□□□□ -1.08
YPT11YNL304W SRP101P32916 621 aa8.31□□□□□ -1.08
YPT11YNL304W TOM20P35180 183 aa8.31□□□□□ -1.08
YPT11YNL304W DOT6P40059 670 aaKnown RBP8.31□□□□□ -1.08
YPT11YNL304W KTR7P40504 517 aa8.31□□□□□ -1.08
YPT11YNL304W SEC28P40509 296 aaKnown RBP8.31□□□□□ -1.08
YPT11YNL304W AIM23P47015 356 aa8.31□□□□□ -1.08
YPT11YNL304W RSM7P47150 247 aa8.31□□□□□ -1.08
YPT11YNL304W PYK2P52489 506 aaKnown RBP8.31□□□□□ -1.08
YPT11YNL304W PEX8P53248 589 aa8.31□□□□□ -1.08
YPT11YNL304W SFB2P53953 876 aa8.31□□□□□ -1.08
YPT11YNL304W MRS2Q01926 470 aa8.31□□□□□ -1.08
YPT11YNL304W NUP100Q02629 959 aa8.31□□□□□ -1.08
YPT11YNL304W YLR177WQ06251 628 aa8.31□□□□□ -1.08
YPT11YNL304W BUD20Q08004 166 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms