RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	DAL5	P15365	543 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	THR1	P17423	357 aa	Known RBP	4.08	□□□□□ -1.76
DSL1	YNL258C	CTP1	P38152	299 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	SDH8	P38345	138 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	RGI2	P40188	164 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	CIR1	P42940	261 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	YNL092W	P53934	400 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	YPL062W	Q02781	134 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	YPL108W	Q02872	168 aa	Predicted RBP	4.08	□□□□□ -1.76
DSL1	YNL258C	CRF1	Q04930	467 aa		4.08	□□□□□ -1.76
DSL1	YNL258C	GPN2	Q08726	347 aa	Predicted RBP	4.08	□□□□□ -1.76
DSL1	YNL258C	GET3	Q12154	354 aa	Known RBP	4.08	□□□□□ -1.76
DSL1	YNL258C	NOP58	Q12499	511 aa	Known RBP	4.08	□□□□□ -1.76
DSL1	YNL258C	SEC53	P07283	254 aa	Known RBP	4.07	□□□□□ -1.76
DSL1	YNL258C	LRE1	P25579	583 aa	Known RBP	4.07	□□□□□ -1.76
DSL1	YNL258C	PEX5	P35056	612 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	PHO11	P35842	467 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	PHO12	P38693	467 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	UTP9	P38882	575 aa	Known RBP	4.07	□□□□□ -1.76
DSL1	YNL258C	YJL206C	P39529	758 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	MET28	P40573	187 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	VMA13	P41807	478 aa	Known RBP	4.07	□□□□□ -1.76
DSL1	YNL258C	YGL036W	P53185	909 aa	Predicted RBP	4.07	□□□□□ -1.76
DSL1	YNL258C	RCF1	Q03713	159 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	GTB1	Q04924	702 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	IRC13	Q08630	104 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	NBP2	Q12163	236 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	DFG16	Q99234	619 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	RPS13	P05756	151 aa	Known RBP	4.07	□□□□□ -1.76
DSL1	YNL258C	CBS1	P14066	229 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	SNT1	P25357	1226 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	MUM2	P38236	366 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	UBP7	P40453	1071 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	MET18	P40469	1032 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	YJL163C	P46996	555 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	ASE1	P50275	885 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	SPC98	P53540	846 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
DSL1	YNL258C	YBR255C-A	Q3E776	120 aa		4.07	□□□□□ -1.76
DSL1	YNL258C	APE1	P14904	514 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	CDC60	P26637	1090 aa	Known RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	RPS0A	P32905	252 aa	Known RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	JHD1	P40034	492 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	ELO3	P40319	345 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	SMC6	Q12749	1114 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	YKL033W-A	Q86ZR7	236 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	YOR019W	Q99248	730 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	CTT1	P06115	562 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	ADK2	P26364	225 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	MVD1	P32377	396 aa	Known RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	CDC5	P32562	705 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	YHR097C	P38809	366 aa	Known RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	SMF1	P38925	575 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	ARF3	P40994	183 aa	RIP-Chip data	4.06	□□□□□ -1.76	RIP-Chip
DSL1	YNL258C	ROK1	P45818	564 aa	Predicted RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	IDS2	P46958	469 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	MTG1	Q03151	367 aa	Predicted RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	CLU1	Q03690	1277 aa	Known RBP	4.06	□□□□□ -1.76
DSL1	YNL258C	CDA2	Q06703	312 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	FRE5	Q08908	694 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	HUA2	Q12134	243 aa		4.06	□□□□□ -1.76
DSL1	YNL258C	SEC12	P11655	471 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	PCT1	P13259	424 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	KGD2	P19262	463 aa	Predicted RBP	4.05	□□□□□ -1.76
DSL1	YNL258C	AMD2	P22580	549 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	OCA4	P25366	362 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	DPH2	P32461	534 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	VPH1	P32563	840 aa	Known RBP	4.05	□□□□□ -1.76
DSL1	YNL258C	ELF1	P36053	145 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	PIG2	P40187	538 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	PFK26	P40433	827 aa	Known RBP	4.05	□□□□□ -1.76
DSL1	YNL258C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
DSL1	YNL258C	GLO1	P50107	326 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	INP52	P50942	1183 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	DAK1	P54838	584 aa	Known RBP	4.05	□□□□□ -1.76
DSL1	YNL258C	INA17	Q02888	182 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	FCP1	Q03254	732 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	SEC15	P22224	910 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	SRB5	P32585	307 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	SRP72	P38688	640 aa	Known RBP	4.05	□□□□□ -1.76
DSL1	YNL258C	SWP82	P43554	623 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	SGF73	P53165	657 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	MEH1	Q02205	184 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	YDR286C	Q05530	114 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	MRI1	Q06489	411 aa	Known RBP	4.05	□□□□□ -1.76
DSL1	YNL258C	RCN2	Q12044	265 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	SWT1	Q12104	458 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	HIF1	Q12373	385 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	YPT6	Q99260	215 aa		4.05	□□□□□ -1.76
DSL1	YNL258C	STE4	P18851	423 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	SRP54	P20424	541 aa	Known RBP	4.04	□□□□□ -1.76
DSL1	YNL258C	CAD1	P24813	409 aa	Known RBP	4.04	□□□□□ -1.76
DSL1	YNL258C	POL4	P25615	582 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	AUR1	P36107	401 aa	Predicted RBP	4.04	□□□□□ -1.76
DSL1	YNL258C	CST26	P38226	397 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	DLT1	Q04216	342 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	ATG23	Q06671	453 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	YEH1	Q07804	573 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	PXA2	P34230	853 aa		4.04	□□□□□ -1.76
DSL1	YNL258C	POL12	P38121	705 aa	Predicted RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms