RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YPT10	P38146	199 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	PMC1	P38929	1173 aa	Predicted RBP	4.06	□□□□□ -1.76
TPM1	YNL079C	YEL020C	P39994	560 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	YIR014W	P40570	242 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	POL31	P46957	487 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	ASN1	P49089	572 aa	Known RBP	4.06	□□□□□ -1.76
TPM1	YNL079C	YGL117W	P53133	265 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	UBX4	P54730	416 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	MOT3	P54785	490 aa	Known RBP	4.06	□□□□□ -1.76
TPM1	YNL079C	ECM16	Q04217	1267 aa	Known RBP	4.06	□□□□□ -1.76
TPM1	YNL079C	ENT2	Q05785	613 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	YDL073W	Q07454	984 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	CRD1	Q07560	283 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	AAD4	Q07747	329 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	ALE1	Q08548	619 aa		4.06	□□□□□ -1.76
TPM1	YNL079C	ROM2	P51862	1356 aa	Known RBP	4.05	□□□□□ -1.76
TPM1	YNL079C	TPK2	P06245	380 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	STE12	P13574	688 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	BET2	P20133	325 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	RAD24	P32641	659 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	OPY1	P38271	328 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	VFA1	P40080	203 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	TRS31	Q03337	283 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	IMH1	Q06704	911 aa	Known RBP	4.05	□□□□□ -1.76
TPM1	YNL079C	TGS1	Q12052	315 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	ZPS1	Q12512	249 aa		4.05	□□□□□ -1.76
TPM1	YNL079C	VPS34	P22543	875 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	MSH1	P25846	959 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	GCD7	P32502	381 aa	Predicted RBP	4.04	□□□□□ -1.76
TPM1	YNL079C	LOT5	P34234	306 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	APM3	P38153	483 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	STT3	P39007	718 aa	Known RBP	4.04	□□□□□ -1.76
TPM1	YNL079C	SAP4	P53036	818 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	COQ6	P53318	479 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	CPR8	P53728	308 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	APM1	Q00776	475 aa	Predicted RBP	4.04	□□□□□ -1.76
TPM1	YNL079C	RMT2	Q03305	412 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	GIS1	Q03833	894 aa		4.04	□□□□□ -1.76
TPM1	YNL079C	EIS1	Q05050	843 aa	Known RBP	4.04	□□□□□ -1.76
TPM1	YNL079C	YRF1-3	P0CX14	1859 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	YRF1-7	P0CX15	1859 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	YRF1-6	P53819	1859 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	SWI1	P09547	1314 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	CPA2	P03965	1118 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	WHI2	P12611	486 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	PGI1	P12709	554 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	SEC18	P18759	758 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	SIR1	P21691	654 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	SPO11	P23179	398 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	SAT4	P25333	603 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	ADY2	P25613	283 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	PRE2	P30656	287 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	SWC3	P31376	625 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	IME2	P32581	645 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	FRD1	P32614	470 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	UGP1	P32861	499 aa	Known RBP	4.03	□□□□□ -1.76
TPM1	YNL079C	SDH8	P38345	138 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	SPC72	P39723	622 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	PAC2	P39937	518 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	IDS2	P46958	469 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	MRK1	P50873	501 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	ZDS2	P54786	942 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	ARG7	Q04728	441 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	NKP2	Q06162	153 aa		4.03	□□□□□ -1.76
TPM1	YNL079C	RAD50	P12753	1312 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	AAC1	P04710	309 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	CTT1	P06115	562 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	YPK1	P12688	680 aa	Known RBP	4.02	□□□□□ -1.77
TPM1	YNL079C	RPA135	P22138	1203 aa	Known RBP	4.02	□□□□□ -1.77
TPM1	YNL079C	MCM3	P24279	971 aa	Known RBP	4.02	□□□□□ -1.77
TPM1	YNL079C	RPS7A	P26786	190 aa	Known RBP	4.02	□□□□□ -1.77
TPM1	YNL079C	YMC1	P32331	307 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	CDC5	P32562	705 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	NUP133	P36161	1157 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	RFC1	P38630	861 aa	Known RBP	4.02	□□□□□ -1.77
TPM1	YNL079C	ACA1	P39970	489 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	DOT5	P40553	215 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	VPS64	Q03944	604 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	SSP2	Q08646	371 aa		4.02	□□□□□ -1.77
TPM1	YNL079C	CDC16	P09798	840 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	POL3	P15436	1097 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	APA1	P16550	321 aa	Known RBP	4.01	□□□□□ -1.77
TPM1	YNL079C	PHO81	P17442	1178 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	PMA2	P19657	947 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	RNR3	P21672	869 aa	Known RBP	4.01	□□□□□ -1.77
TPM1	YNL079C	PPZ2	P33329	710 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	RPT2	P40327	437 aa	Known RBP	4.01	□□□□□ -1.77
TPM1	YNL079C	GFD1	Q04839	188 aa	Known RBP	4.01	□□□□□ -1.77
TPM1	YNL079C	AIM6	Q07716	390 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
TPM1	YNL079C	ULA1	Q12059	462 aa		4.01	□□□□□ -1.77
TPM1	YNL079C	ADE5,7	P07244	802 aa	Known RBP	4	□□□□□ -1.77
TPM1	YNL079C	LPD1	P09624	499 aa	Known RBP	4	□□□□□ -1.77
TPM1	YNL079C	PCT1	P13259	424 aa		4	□□□□□ -1.77
TPM1	YNL079C	ILV6	P25605	309 aa	Known RBP	4	□□□□□ -1.77
TPM1	YNL079C	AAD3	P25612	363 aa		4	□□□□□ -1.77
TPM1	YNL079C	YCR061W	P25639	631 aa		4	□□□□□ -1.77
TPM1	YNL079C	RIX1	P38883	763 aa	Predicted RBP	4	□□□□□ -1.77
TPM1	YNL079C	ARB1	P40024	610 aa	Known RBP	4	□□□□□ -1.77
TPM1	YNL079C	CPR6	P53691	371 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms