RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C RRI1Q12468 440 aa2.64□□□□□ -1.99
VTI1YMR197C PHO2P07269 559 aa2.63□□□□□ -1.99
VTI1YMR197C SES1P07284 462 aaKnown RBP2.63□□□□□ -1.99
VTI1YMR197C CNA1P23287 553 aa2.63□□□□□ -1.99
VTI1YMR197C RPN12P32496 274 aa2.63□□□□□ -1.99
VTI1YMR197C GPP2P40106 250 aaKnown RBP2.63□□□□□ -1.99
VTI1YMR197C YIL169CP40442 995 aa2.63□□□□□ -1.99
VTI1YMR197C IDS2P46958 469 aa2.63□□□□□ -1.99
VTI1YMR197C YGR021WP53212 290 aa2.63□□□□□ -1.99
VTI1YMR197C GIR2Q03768 265 aaPredicted RBP2.63□□□□□ -1.99
VTI1YMR197C SCW10Q04951 389 aa2.63□□□□□ -1.99
VTI1YMR197C ECM22Q05958 814 aaPredicted RBP2.63□□□□□ -1.99
VTI1YMR197C RTK1Q12100 620 aaPredicted RBP2.63□□□□□ -1.99
VTI1YMR197C YER175W-AQ8TGU4 54 aa2.63□□□□□ -1.99
VTI1YMR197C PET309P32522 965 aaPredicted RBP2.62□□□□□ -1.99
VTI1YMR197C YBR071WP38243 211 aa2.62□□□□□ -1.99
VTI1YMR197C MET30P39014 640 aa2.62□□□□□ -1.99
VTI1YMR197C DUG1P43616 481 aaKnown RBP2.62□□□□□ -1.99
VTI1YMR197C ORC5P50874 479 aa2.62□□□□□ -1.99
VTI1YMR197C YGL260WP53056 76 aa2.62□□□□□ -1.99
VTI1YMR197C ESF2P53743 316 aaKnown RBP2.62□□□□□ -1.99
VTI1YMR197C YNR071CP53757 342 aa2.62□□□□□ -1.99
VTI1YMR197C YNL144CP53907 740 aa2.62□□□□□ -1.99
VTI1YMR197C YAT1P80235 687 aa2.62□□□□□ -1.99
VTI1YMR197C ACS1Q01574 713 aa2.62□□□□□ -1.99
VTI1YMR197C TRE2Q08693 809 aa2.62□□□□□ -1.99
VTI1YMR197C PGI1P12709 554 aaKnown RBP2.61□□□□□ -1.99
VTI1YMR197C KGD2P19262 463 aaPredicted RBP2.61□□□□□ -1.99
VTI1YMR197C YCR061WP25639 631 aa2.61□□□□□ -1.99
VTI1YMR197C GSH1P32477 678 aa2.61□□□□□ -1.99
VTI1YMR197C MRS6P32864 603 aaKnown RBP2.61□□□□□ -1.99
VTI1YMR197C RPT2P40327 437 aaKnown RBP2.61□□□□□ -1.99
VTI1YMR197C MAD2P40958 196 aa2.61□□□□□ -1.99
VTI1YMR197C YJL107CP42947 387 aa2.61□□□□□ -1.99
VTI1YMR197C GSM1P42950 618 aa2.61□□□□□ -1.99
VTI1YMR197C PEX14P53112 341 aa2.61□□□□□ -1.99
VTI1YMR197C SPC105P53148 917 aa2.61□□□□□ -1.99
VTI1YMR197C COG6P53959 839 aa2.61□□□□□ -1.99
VTI1YMR197C UBX4P54730 416 aa2.61□□□□□ -1.99
VTI1YMR197C SVL3Q03088 825 aaKnown RBP2.61□□□□□ -1.99
VTI1YMR197C DIN7Q12086 430 aa2.61□□□□□ -1.99
VTI1YMR197C PIF1P07271 859 aa2.6□□□□□ -1.99
VTI1YMR197C ILV2P07342 687 aaKnown RBP2.6□□□□□ -1.99
VTI1YMR197C YFL068WP0CX99 160 aa2.6□□□□□ -1.99
VTI1YMR197C YLL066W-AP0CY00 160 aa2.6□□□□□ -1.99
VTI1YMR197C YLL067W-AP0CY01 160 aa2.6□□□□□ -1.99
VTI1YMR197C SST2P11972 698 aaKnown RBP2.6□□□□□ -1.99
VTI1YMR197C COX11P19516 300 aaKnown RBP2.6□□□□□ -1.99
VTI1YMR197C PRE2P30656 287 aaKnown RBP2.6□□□□□ -1.99
VTI1YMR197C PTH2P34222 208 aa2.6□□□□□ -1.99
VTI1YMR197C RTT107P38850 1070 aa2.6□□□□□ -1.99
VTI1YMR197C STL1P39932 569 aa2.6□□□□□ -1.99
VTI1YMR197C IES5P40060 125 aa2.6□□□□□ -1.99
VTI1YMR197C UBP7P40453 1071 aa2.6□□□□□ -1.99
VTI1YMR197C SAD1P43589 448 aa2.6□□□□□ -1.99
VTI1YMR197C DIG1Q03063 452 aaKnown RBP2.6□□□□□ -1.99
VTI1YMR197C GSH2Q08220 491 aa2.6□□□□□ -1.99
VTI1YMR197C MPD2Q99316 277 aa2.6□□□□□ -1.99
VTI1YMR197C RPL42AP0CX27 106 aaKnown RBP2.59□□□□□ -1.99
VTI1YMR197C RPL42BP0CX28 106 aaKnown RBP2.59□□□□□ -1.99
VTI1YMR197C PRP45P28004 379 aaPredicted RBP2.59□□□□□ -1.99
VTI1YMR197C TFC4P33339 1025 aa2.59□□□□□ -1.99
VTI1YMR197C NIC96P34077 839 aa2.59□□□□□ -1.99
VTI1YMR197C VBA2P38358 474 aaKnown RBP2.59□□□□□ -1.99
VTI1YMR197C ARN1P38731 627 aa2.59□□□□□ -1.99
VTI1YMR197C VID27P40157 782 aa2.59□□□□□ -1.99
VTI1YMR197C NIT2P47016 307 aa2.59□□□□□ -1.99
VTI1YMR197C YNL034WP53963 612 aa2.59□□□□□ -1.99
VTI1YMR197C TGL2P54857 326 aa2.59□□□□□ -1.99
VTI1YMR197C CRF1Q04930 467 aa2.59□□□□□ -1.99
VTI1YMR197C ECM38Q05902 660 aaPredicted RBP2.59□□□□□ -1.99
VTI1YMR197C YPL191CQ08930 360 aa2.59□□□□□ -1.99
VTI1YMR197C PTP2P29461 750 aa2.58□□□□□ -2
VTI1YMR197C MSS51P32335 436 aa2.58□□□□□ -2
VTI1YMR197C SSH4P32343 579 aa2.58□□□□□ -2
VTI1YMR197C FMP46P36141 133 aaKnown RBP2.58□□□□□ -2
VTI1YMR197C VFA1P40080 203 aa2.58□□□□□ -2
VTI1YMR197C HOS2P53096 452 aaPredicted RBP2.58□□□□□ -2
VTI1YMR197C HOL1P53389 586 aa2.58□□□□□ -2
VTI1YMR197C BET4Q00618 327 aa2.58□□□□□ -2
VTI1YMR197C MDM1Q01846 1127 aa2.58□□□□□ -2
VTI1YMR197C MET14Q02196 202 aa2.58□□□□□ -2
VTI1YMR197C TRS31Q03337 283 aa2.58□□□□□ -2
VTI1YMR197C YMR317WQ04893 1140 aa2.58□□□□□ -2
VTI1YMR197C ERP4Q12450 207 aa2.58□□□□□ -2
VTI1YMR197C PTC6P25646 442 aa2.57□□□□□ -2
VTI1YMR197C PPZ1P26570 692 aa2.57□□□□□ -2
VTI1YMR197C RPS7AP26786 190 aaKnown RBP2.57□□□□□ -2
VTI1YMR197C YKL133CP36066 463 aa2.57□□□□□ -2
VTI1YMR197C RPF2P36160 344 aaKnown RBP2.57□□□□□ -2
VTI1YMR197C JNM1P36224 373 aa2.57□□□□□ -2
VTI1YMR197C SSP120P39931 234 aaKnown RBP2.57□□□□□ -2
VTI1YMR197C ARB1P40024 610 aaKnown RBP2.57□□□□□ -2
VTI1YMR197C VRG4P40107 337 aa2.57□□□□□ -2
VTI1YMR197C TAN1P53072 289 aaPredicted RBP2.57□□□□□ -2
VTI1YMR197C SLD3P53135 668 aa2.57□□□□□ -2
VTI1YMR197C PAP2P53632 584 aaKnown RBP2.57□□□□□ -2
VTI1YMR197C THI3Q07471 609 aa2.57□□□□□ -2
VTI1YMR197C PSR2Q07949 397 aa2.57□□□□□ -2
VTI1YMR197C RRP6Q12149 733 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms