RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	YHR182W	P38870	785 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	XDJ1	P39102	459 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	FRT2	P39734	528 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	ACA1	P39970	489 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	RRT14	P40470	206 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	MSS2	P40990	351 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
SEC39	YLR440C	UFE1	P41834	346 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	IMD4	P50094	524 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	ROM1	P53046	1155 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	GPG1	P53130	126 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	YGR250C	P53316	781 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	SQS1	P53866	767 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	UME1	Q03010	460 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	FIN1	Q03898	291 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	VPS38	Q05919	439 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	YLR031W	Q07978	186 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	TRE2	Q08693	809 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	RTR2	Q12378	196 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	CDC36	P06100	191 aa	Predicted RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	ERR1	P0CX10	437 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	ERR2	P0CX11	437 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	SUP45	P12385	437 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	PRP4	P20053	465 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	UBA1	P22515	1024 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	PHO3	P24031	467 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	EMC1	P25574	760 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	ADE17	P38009	592 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	KTR4	P38131	464 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	MCM7	P38132	845 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	RGD1	P38339	666 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	SCC4	P40090	624 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	PIG2	P40187	538 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	MNN11	P46985	422 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	NPY1	P53164	384 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	NAF1	P53919	492 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	NAN1	Q02931	896 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	RSN1	Q03516	953 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	UTP21	Q06078	939 aa	Predicted RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	NUT2	Q06213	157 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	DXO1	Q06349	442 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	DIS3	Q08162	1001 aa	Known RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	FLC1	Q08967	793 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	FAP7	Q12055	197 aa	Predicted RBP	5.09	□□□□□ -1.59
SEC39	YLR440C	ISA2	Q12425	185 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	NCB2	Q92317	146 aa		5.09	□□□□□ -1.59
SEC39	YLR440C	ENO1	P00924	437 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	ARG3	P05150	338 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	STE12	P13574	688 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	MSD1	P15179	658 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	MIP1	P15801	1254 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	PAT1	P25644	796 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	CRM1	P30822	1084 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	HXT1	P32465	570 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	ERG1	P32476	496 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	BEM3	P32873	1128 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	RPT5	P33297	434 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	PGM2	P37012	569 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	MRX3	P38172	270 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SIF2	P38262	535 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	TDP1	P38319	544 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	TDA3	P38758	523 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	PCL6	P40038	420 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SLM1	P40485	686 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	ICE2	P40499	491 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	QRI1	P43123	477 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	LSM1	P47017	172 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	MCM6	P53091	1017 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	DSD1	P53095	428 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	PBP1	P53297	722 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	EOS1	P53938	366 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	RPT6	Q01939	405 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	REC102	Q02721	264 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SEG1	Q04279	960 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	THI73	Q07904	523 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	TGS1	Q12052	315 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	PSF3	Q12146	194 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	TIP41	Q12199	356 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	GIS3	Q12418	502 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SKM1	Q12469	655 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SEY1	Q99287	776 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	PMA1	P05030	918 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	CHS1	P08004	1131 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	TCP1	P12612	559 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	BAS1	P22035	811 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	CLB4	P24871	460 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	GIT1	P25346	518 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	RRP7	P25368	297 aa	Predicted RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	BOS1	P25385	244 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	ECM2	P38241	364 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	LSM12	P38828	187 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	EGD2	P38879	174 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	RSP5	P39940	809 aa	Known RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	CAB2	P40506	365 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	GNP1	P48813	663 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	MAL11	P53048	616 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SNF12	P53628	566 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	SNP1	Q00916	300 aa	Predicted RBP	5.08	□□□□□ -1.6
SEC39	YLR440C	SPH1	Q06160	661 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	THI3	Q07471	609 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms