RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YGR021WP53212 290 aa3.71□□□□□ -1.82
VPS33YLR396C GFD1Q04839 188 aaKnown RBP3.71□□□□□ -1.82
VPS33YLR396C CRF1Q04930 467 aa3.71□□□□□ -1.82
VPS33YLR396C PCL8Q08966 492 aa3.71□□□□□ -1.82
VPS33YLR396C RPL7BQ12213 244 aaKnown RBP3.71□□□□□ -1.82
VPS33YLR396C IQG1Q12280 1495 aa3.7□□□□□ -1.82
VPS33YLR396C NCP1P16603 691 aaKnown RBP3.7□□□□□ -1.82
VPS33YLR396C ARO9P38840 513 aaPredicted RBP3.7□□□□□ -1.82
VPS33YLR396C ERR3P42222 437 aa3.7□□□□□ -1.82
VPS33YLR396C YFL015CP43578 164 aa3.7□□□□□ -1.82
VPS33YLR396C ARA2Q04212 335 aa3.7□□□□□ -1.82
VPS33YLR396C ARO10Q06408 635 aa3.7□□□□□ -1.82
VPS33YLR396C CRT10Q08226 957 aa3.7□□□□□ -1.82
VPS33YLR396C BNR1P40450 1375 aa3.7□□□□□ -1.82
VPS33YLR396C AMD2P22580 549 aa3.69□□□□□ -1.82
VPS33YLR396C AAD3P25612 363 aa3.69□□□□□ -1.82
VPS33YLR396C PPZ2P33329 710 aa3.69□□□□□ -1.82
VPS33YLR396C FLO10P36170 1169 aa3.69□□□□□ -1.82
VPS33YLR396C SAP185P40856 1058 aa3.69□□□□□ -1.82
VPS33YLR396C ARC35P53731 342 aaKnown RBP3.69□□□□□ -1.82
VPS33YLR396C YML119WQ03208 357 aa3.69□□□□□ -1.82
VPS33YLR396C CAT8P39113 1433 aa3.69□□□□□ -1.82
VPS33YLR396C VTH1P40438 1549 aa3.69□□□□□ -1.82
VPS33YLR396C VTH2P40890 1549 aa3.69□□□□□ -1.82
VPS33YLR396C ADE5,7P07244 802 aaKnown RBP3.69□□□□□ -1.82
VPS33YLR396C CLB4P24871 460 aa3.69□□□□□ -1.82
VPS33YLR396C YCL049CP25577 312 aa3.69□□□□□ -1.82
VPS33YLR396C ILV6P25605 309 aaKnown RBP3.69□□□□□ -1.82
VPS33YLR396C ARP2P32381 391 aaKnown RBP3.69□□□□□ -1.82
VPS33YLR396C MED8P38304 223 aa3.69□□□□□ -1.82
VPS33YLR396C VPS8P39702 1274 aa3.69□□□□□ -1.82
VPS33YLR396C RSC1P53236 928 aa3.69□□□□□ -1.82
VPS33YLR396C ATG21Q02887 496 aa3.69□□□□□ -1.82
VPS33YLR396C WAR1Q03631 944 aa3.69□□□□□ -1.82
VPS33YLR396C SUL2Q12325 893 aa3.69□□□□□ -1.82
VPS33YLR396C YER175W-AQ8TGU4 54 aa3.69□□□□□ -1.82
VPS33YLR396C Q0010Q9ZZX9 128 aa3.69□□□□□ -1.82
VPS33YLR396C CHO2P05374 869 aaKnown RBP3.68□□□□□ -1.82
VPS33YLR396C KGD2P19262 463 aaPredicted RBP3.68□□□□□ -1.82
VPS33YLR396C GDA1P32621 518 aa3.68□□□□□ -1.82
VPS33YLR396C MRS6P32864 603 aaKnown RBP3.68□□□□□ -1.82
VPS33YLR396C DSN1P40568 576 aa3.68□□□□□ -1.82
VPS33YLR396C TDA10P42938 290 aa3.68□□□□□ -1.82
VPS33YLR396C BLS1Q06071 122 aa3.68□□□□□ -1.82
VPS33YLR396C PDR12Q02785 1511 aa3.68□□□□□ -1.82
VPS33YLR396C YMR084WA2P2R3 262 aa3.67□□□□□ -1.82
VPS33YLR396C TUB1P09733 447 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C MTF2P10849 440 aa3.67□□□□□ -1.82
VPS33YLR396C MRPL9P31334 269 aa3.67□□□□□ -1.82
VPS33YLR396C RKM3P38222 552 aa3.67□□□□□ -1.82
VPS33YLR396C FSH1P38777 243 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C MAM1P40065 302 aa3.67□□□□□ -1.82
VPS33YLR396C BST1P43571 1029 aa3.67□□□□□ -1.82
VPS33YLR396C YPL108WQ02872 168 aaPredicted RBP3.67□□□□□ -1.82
VPS33YLR396C RAD33Q04231 177 aa3.67□□□□□ -1.82
VPS33YLR396C YDL242WQ07746 117 aa3.67□□□□□ -1.82
VPS33YLR396C PSR2Q07949 397 aa3.67□□□□□ -1.82
VPS33YLR396C TAD3Q9URQ3 322 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-HO13535 1793 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-DR5P0C2I2 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-DR6P0C2I3 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-LR2P0C2I5 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-LR3P0C2I6 1755 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C TY1B-PR1P0C2I9 1755 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C TY1B-PR2P0C2J0 1756 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-PR3P0C2J1 1755 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C TY1B-JR1P47098 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-ML2Q03434 1755 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C TY1B-ER1Q03612 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-ML1Q04711 1755 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C TY1B-GR2Q12269 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-OLQ12273 1755 aa3.67□□□□□ -1.82
VPS33YLR396C TY1B-PLQ12414 1755 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C TRX2P22803 104 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C LNP1P38878 278 aa3.67□□□□□ -1.82
VPS33YLR396C CIN4P39110 191 aa3.67□□□□□ -1.82
VPS33YLR396C EXO1P39875 702 aa3.67□□□□□ -1.82
VPS33YLR396C TAM41P53230 385 aa3.67□□□□□ -1.82
VPS33YLR396C PIL1P53252 339 aaKnown RBP3.67□□□□□ -1.82
VPS33YLR396C MDG1P53885 366 aa3.67□□□□□ -1.82
VPS33YLR396C UBP16Q02863 499 aa3.67□□□□□ -1.82
VPS33YLR396C TFC6Q06339 672 aa3.67□□□□□ -1.82
VPS33YLR396C LCB4Q12246 624 aa3.67□□□□□ -1.82
VPS33YLR396C YBR255C-AQ3E776 120 aa3.67□□□□□ -1.82
VPS33YLR396C PET122P10355 254 aa3.66□□□□□ -1.82
VPS33YLR396C YJU2P28320 278 aaPredicted RBP3.66□□□□□ -1.82
VPS33YLR396C LTV1P34078 463 aa3.66□□□□□ -1.82
VPS33YLR396C TCD1P38756 429 aa3.66□□□□□ -1.82
VPS33YLR396C LAS21P40367 830 aa3.66□□□□□ -1.82
VPS33YLR396C OPT1P40897 799 aa3.66□□□□□ -1.82
VPS33YLR396C MPP10P47083 593 aaKnown RBP3.66□□□□□ -1.82
VPS33YLR396C MRPL13Q02204 264 aa3.66□□□□□ -1.82
VPS33YLR396C FMP30Q02883 468 aa3.66□□□□□ -1.82
VPS33YLR396C TRS130Q03660 1102 aa3.66□□□□□ -1.82
VPS33YLR396C ROM2P51862 1356 aaKnown RBP3.66□□□□□ -1.82
VPS33YLR396C HAP1P0CE41 1502 aa3.66□□□□□ -1.82
VPS33YLR396C HEM1P09950 548 aaPredicted RBP3.66□□□□□ -1.82
VPS33YLR396C SNF2P22082 1703 aa3.66□□□□□ -1.82
VPS33YLR396C CLB1P24868 471 aa3.66□□□□□ -1.82
VPS33YLR396C DEP1P31385 405 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms