RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A PFA4Q12006 378 aa3.69□□□□□ -1.82
SFT1YKL006C-A ICL2Q12031 575 aa3.69□□□□□ -1.82
SFT1YKL006C-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
SFT1YKL006C-A TMA7Q3E764 64 aaKnown RBP3.69□□□□□ -1.82
SFT1YKL006C-A YBR255C-AQ3E776 120 aa3.69□□□□□ -1.82
SFT1YKL006C-A GAL4P04386 881 aa3.68□□□□□ -1.82
SFT1YKL006C-A TOM20P35180 183 aa3.68□□□□□ -1.82
SFT1YKL006C-A PXL1P36166 706 aa3.68□□□□□ -1.82
SFT1YKL006C-A ERV46P39727 415 aa3.68□□□□□ -1.82
SFT1YKL006C-A CAB2P40506 365 aa3.68□□□□□ -1.82
SFT1YKL006C-A MDV1P47025 714 aa3.68□□□□□ -1.82
SFT1YKL006C-A MAD3P47074 515 aa3.68□□□□□ -1.82
SFT1YKL006C-A LSC1P53598 329 aaKnown RBP3.68□□□□□ -1.82
SFT1YKL006C-A TDA9Q04545 1251 aa3.68□□□□□ -1.82
SFT1YKL006C-A ATX2Q12067 313 aa3.68□□□□□ -1.82
SFT1YKL006C-A COX1P00401 534 aa3.67□□□□□ -1.82
SFT1YKL006C-A GSH1P32477 678 aa3.67□□□□□ -1.82
SFT1YKL006C-A SWE1P32944 819 aa3.67□□□□□ -1.82
SFT1YKL006C-A ERC1P38767 581 aa3.67□□□□□ -1.82
SFT1YKL006C-A MEP2P41948 499 aa3.67□□□□□ -1.82
SFT1YKL006C-A NPA3P47122 385 aa3.67□□□□□ -1.82
SFT1YKL006C-A YNL144CP53907 740 aa3.67□□□□□ -1.82
SFT1YKL006C-A TEP1P53916 434 aa3.67□□□□□ -1.82
SFT1YKL006C-A TGL2P54857 326 aa3.67□□□□□ -1.82
SFT1YKL006C-A ATG21Q02887 496 aa3.67□□□□□ -1.82
SFT1YKL006C-A SNA4Q07549 140 aa3.67□□□□□ -1.82
SFT1YKL006C-A LEA1Q08963 238 aaPredicted RBP3.67□□□□□ -1.82
SFT1YKL006C-A GET3Q12154 354 aaKnown RBP3.67□□□□□ -1.82
SFT1YKL006C-A YOL114CQ12322 202 aa3.67□□□□□ -1.82
SFT1YKL006C-A RVB2Q12464 471 aaKnown RBP3.67□□□□□ -1.82
SFT1YKL006C-A RRI1Q12468 440 aa3.67□□□□□ -1.82
SFT1YKL006C-A SST2P11972 698 aaKnown RBP3.66□□□□□ -1.82
SFT1YKL006C-A YUR1P26725 428 aa3.66□□□□□ -1.82
SFT1YKL006C-A LAC1P28496 418 aa3.66□□□□□ -1.82
SFT1YKL006C-A YKL133CP36066 463 aa3.66□□□□□ -1.82
SFT1YKL006C-A SKP2P42843 763 aa3.66□□□□□ -1.82
SFT1YKL006C-A YJL107CP42947 387 aa3.66□□□□□ -1.82
SFT1YKL006C-A TAN1P53072 289 aaPredicted RBP3.66□□□□□ -1.82
SFT1YKL006C-A BOP3P53958 396 aa3.66□□□□□ -1.82
SFT1YKL006C-A RPL15BP54780 204 aaPredicted RBP3.66□□□□□ -1.82
SFT1YKL006C-A ARA2Q04212 335 aa3.66□□□□□ -1.82
SFT1YKL006C-A YDR109CQ04585 715 aa3.66□□□□□ -1.82
SFT1YKL006C-A THI3Q07471 609 aa3.66□□□□□ -1.82
SFT1YKL006C-A POL3P15436 1097 aa3.65□□□□□ -1.83
SFT1YKL006C-A AIM17P23180 465 aaKnown RBP3.65□□□□□ -1.83
SFT1YKL006C-A GCD7P32502 381 aaPredicted RBP3.65□□□□□ -1.83
SFT1YKL006C-A ARN1P38731 627 aa3.65□□□□□ -1.83
SFT1YKL006C-A TOM71P38825 639 aaKnown RBP3.65□□□□□ -1.83
SFT1YKL006C-A STT3P39007 718 aaKnown RBP3.65□□□□□ -1.83
SFT1YKL006C-A LYS20P48570 428 aaKnown RBP3.65□□□□□ -1.83
SFT1YKL006C-A PEX8P53248 589 aa3.65□□□□□ -1.83
SFT1YKL006C-A UBX3Q12229 455 aa3.65□□□□□ -1.83
SFT1YKL006C-A CNA1P23287 553 aa3.64□□□□□ -1.83
SFT1YKL006C-A YCP4P25349 247 aaKnown RBP3.64□□□□□ -1.83
SFT1YKL006C-A GRX7P38068 203 aa3.64□□□□□ -1.83
SFT1YKL006C-A YPT11P48559 417 aa3.64□□□□□ -1.83
SFT1YKL006C-A YGR079WP53249 370 aa3.64□□□□□ -1.83
SFT1YKL006C-A YPR003CP53394 754 aa3.64□□□□□ -1.83
SFT1YKL006C-A VTC3Q02725 835 aa3.64□□□□□ -1.83
SFT1YKL006C-A PDR8Q06149 701 aa3.64□□□□□ -1.83
SFT1YKL006C-A HIM1Q06674 414 aa3.64□□□□□ -1.83
SFT1YKL006C-A BUD7Q08754 746 aa3.64□□□□□ -1.83
SFT1YKL006C-A ADE3P07245 946 aaKnown RBP3.63□□□□□ -1.83
SFT1YKL006C-A MIS1P09440 975 aaKnown RBP3.63□□□□□ -1.83
SFT1YKL006C-A SIR1P21691 654 aa3.63□□□□□ -1.83
SFT1YKL006C-A RIT1P23796 513 aa3.63□□□□□ -1.83
SFT1YKL006C-A MSH1P25846 959 aa3.63□□□□□ -1.83
SFT1YKL006C-A ATO2P32907 282 aa3.63□□□□□ -1.83
SFT1YKL006C-A APM3P38153 483 aa3.63□□□□□ -1.83
SFT1YKL006C-A GND1P38720 489 aaKnown RBP3.63□□□□□ -1.83
SFT1YKL006C-A UBP7P40453 1071 aa3.63□□□□□ -1.83
SFT1YKL006C-A HIS6P40545 261 aa3.63□□□□□ -1.83
SFT1YKL006C-A NUP53Q03790 475 aa3.63□□□□□ -1.83
SFT1YKL006C-A IWR1Q07532 353 aaPredicted RBP3.63□□□□□ -1.83
SFT1YKL006C-A SRL1Q08673 210 aa3.63□□□□□ -1.83
SFT1YKL006C-A SUI3P09064 285 aaKnown RBP3.62□□□□□ -1.83
SFT1YKL006C-A YCR006CP25350 157 aa3.62□□□□□ -1.83
SFT1YKL006C-A FRD1P32614 470 aaKnown RBP3.62□□□□□ -1.83
SFT1YKL006C-A HES1P35843 434 aa3.62□□□□□ -1.83
SFT1YKL006C-A FAF1P40546 346 aaPredicted RBP3.62□□□□□ -1.83
SFT1YKL006C-A PET122P10355 254 aa3.61□□□□□ -1.83
SFT1YKL006C-A MCM3P24279 971 aaKnown RBP3.61□□□□□ -1.83
SFT1YKL006C-A URK1P27515 501 aa3.61□□□□□ -1.83
SFT1YKL006C-A VPS27P40343 622 aaKnown RBP3.61□□□□□ -1.83
SFT1YKL006C-A VPS25P47142 202 aa3.61□□□□□ -1.83
SFT1YKL006C-A YRB30P53107 440 aaPredicted RBP3.61□□□□□ -1.83
SFT1YKL006C-A SUB1P54000 292 aaKnown RBP3.61□□□□□ -1.83
SFT1YKL006C-A MET14Q02196 202 aa3.61□□□□□ -1.83
SFT1YKL006C-A MTG1Q03151 367 aaPredicted RBP3.61□□□□□ -1.83
SFT1YKL006C-A YOL057WQ08225 711 aa3.61□□□□□ -1.83
SFT1YKL006C-A SUL2Q12325 893 aa3.61□□□□□ -1.83
SFT1YKL006C-A GAL1P04385 528 aa3.6□□□□□ -1.83
SFT1YKL006C-A PIF1P07271 859 aa3.6□□□□□ -1.83
SFT1YKL006C-A SWI4P25302 1093 aaKnown RBP3.6□□□□□ -1.83
SFT1YKL006C-A GCS1P35197 352 aa3.6□□□□□ -1.83
SFT1YKL006C-A OCT1P35999 772 aa3.6□□□□□ -1.83
SFT1YKL006C-A TPM2P40414 161 aa3.6□□□□□ -1.83
SFT1YKL006C-A QRI7P43122 407 aa3.6□□□□□ -1.83
SFT1YKL006C-A UBP8P50102 471 aa3.6□□□□□ -1.83
SFT1YKL006C-A MOT3P54785 490 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms