RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C UGP1P32861 499 aaKnown RBP2.4□□□□□ -2.03
VPS35YJL154C PPZ2P33329 710 aa2.4□□□□□ -2.03
VPS35YJL154C RRN3P36070 627 aa2.4□□□□□ -2.03
VPS35YJL154C YEL020CP39994 560 aa2.4□□□□□ -2.03
VPS35YJL154C BST1P43571 1029 aa2.4□□□□□ -2.03
VPS35YJL154C YJL043WP47053 257 aa2.4□□□□□ -2.03
VPS35YJL154C COG1P53079 417 aa2.4□□□□□ -2.03
VPS35YJL154C RPS15Q01855 142 aaKnown RBP2.4□□□□□ -2.03
VPS35YJL154C YOR389WQ08912 624 aa2.4□□□□□ -2.03
VPS35YJL154C YMR084WA2P2R3 262 aa2.39□□□□□ -2.03
VPS35YJL154C PRE8P23639 250 aa2.39□□□□□ -2.03
VPS35YJL154C CHS3P29465 1165 aa2.39□□□□□ -2.03
VPS35YJL154C MIT1P40002 666 aa2.39□□□□□ -2.03
VPS35YJL154C ASE1P50275 885 aa2.39□□□□□ -2.03
VPS35YJL154C FCP1Q03254 732 aa2.39□□□□□ -2.03
VPS35YJL154C VID22Q05934 901 aa2.39□□□□□ -2.03
VPS35YJL154C ULA1Q12059 462 aa2.39□□□□□ -2.03
VPS35YJL154C CDC15P27636 974 aa2.39□□□□□ -2.03
VPS35YJL154C KTR3P38130 404 aaPredicted RBP2.39□□□□□ -2.03
VPS35YJL154C IFA38P38286 347 aa2.39□□□□□ -2.03
VPS35YJL154C ARO9P38840 513 aaPredicted RBP2.39□□□□□ -2.03
VPS35YJL154C TMA108P40462 946 aa2.39□□□□□ -2.03
VPS35YJL154C CTF18P49956 741 aa2.39□□□□□ -2.03
VPS35YJL154C CBK1P53894 756 aa2.39□□□□□ -2.03
VPS35YJL154C TMA64Q04600 565 aaKnown RBP2.39□□□□□ -2.03
VPS35YJL154C CIA1Q05583 330 aa2.39□□□□□ -2.03
VPS35YJL154C NUS1Q12063 375 aa2.39□□□□□ -2.03
VPS35YJL154C SUL2Q12325 893 aa2.39□□□□□ -2.03
VPS35YJL154C ENT1Q12518 454 aa2.39□□□□□ -2.03
VPS35YJL154C YBR255C-AQ3E776 120 aa2.39□□□□□ -2.03
VPS35YJL154C TAF2P23255 1407 aa2.39□□□□□ -2.03
VPS35YJL154C RPL7AP05737 244 aaKnown RBP2.38□□□□□ -2.03
VPS35YJL154C GDA1P32621 518 aa2.38□□□□□ -2.03
VPS35YJL154C YGR079WP53249 370 aa2.38□□□□□ -2.03
VPS35YJL154C SLI1P53304 468 aa2.38□□□□□ -2.03
VPS35YJL154C YNL058CP53947 316 aa2.38□□□□□ -2.03
VPS35YJL154C SWT1Q12104 458 aa2.38□□□□□ -2.03
VPS35YJL154C RPL7BQ12213 244 aaKnown RBP2.38□□□□□ -2.03
VPS35YJL154C SKM1Q12469 655 aa2.38□□□□□ -2.03
VPS35YJL154C RPC34P32910 317 aa2.38□□□□□ -2.03
VPS35YJL154C TFC3P34111 1160 aa2.38□□□□□ -2.03
VPS35YJL154C UBS1P38290 277 aa2.38□□□□□ -2.03
VPS35YJL154C YGL117WP53133 265 aa2.38□□□□□ -2.03
VPS35YJL154C TAM41P53230 385 aa2.38□□□□□ -2.03
VPS35YJL154C PLM2Q04383 521 aa2.38□□□□□ -2.03
VPS35YJL154C TY2A-LR1P0C2J4 438 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-FP0CX61 438 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-GR2P0CX62 438 aa2.37□□□□□ -2.03
VPS35YJL154C BIK1P11709 440 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-CP25383 438 aa2.37□□□□□ -2.03
VPS35YJL154C AAD3P25612 363 aa2.37□□□□□ -2.03
VPS35YJL154C MCM10P32354 571 aa2.37□□□□□ -2.03
VPS35YJL154C SWE1P32944 819 aa2.37□□□□□ -2.03
VPS35YJL154C MRK1P50873 501 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-DR2Q03483 438 aa2.37□□□□□ -2.03
VPS35YJL154C GIS1Q03833 894 aa2.37□□□□□ -2.03
VPS35YJL154C YDR109CQ04585 715 aa2.37□□□□□ -2.03
VPS35YJL154C ORM2Q06144 216 aa2.37□□□□□ -2.03
VPS35YJL154C ATG23Q06671 453 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-BQ12260 438 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-OR2Q12293 438 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-DR1Q12392 438 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-OR1Q12439 438 aa2.37□□□□□ -2.03
VPS35YJL154C TY2A-DR3Q99303 438 aa2.37□□□□□ -2.03
VPS35YJL154C CHO2P05374 869 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C SNF1P06782 633 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C GUK1P15454 187 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C URK1P27515 501 aa2.37□□□□□ -2.03
VPS35YJL154C SAP1P39955 897 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C PFK26P40433 827 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C MNT3P40549 630 aa2.37□□□□□ -2.03
VPS35YJL154C CIR1P42940 261 aa2.37□□□□□ -2.03
VPS35YJL154C YFL015CP43578 164 aa2.37□□□□□ -2.03
VPS35YJL154C REG1Q00816 1014 aa2.37□□□□□ -2.03
VPS35YJL154C YML119WQ03208 357 aa2.37□□□□□ -2.03
VPS35YJL154C STP3Q05937 343 aa2.37□□□□□ -2.03
VPS35YJL154C YDL242WQ07746 117 aa2.37□□□□□ -2.03
VPS35YJL154C TMA16Q08687 178 aa2.37□□□□□ -2.03
VPS35YJL154C LYS21Q12122 440 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C SEC3P33332 1336 aaKnown RBP2.37□□□□□ -2.03
VPS35YJL154C COX1P00401 534 aa2.36□□□□□ -2.03
VPS35YJL154C SUI3P09064 285 aaKnown RBP2.36□□□□□ -2.03
VPS35YJL154C LAC1P28496 418 aa2.36□□□□□ -2.03
VPS35YJL154C YER010CP40011 234 aa2.36□□□□□ -2.03
VPS35YJL154C DJP1P40564 432 aa2.36□□□□□ -2.03
VPS35YJL154C PSP1P50896 841 aaKnown RBP2.36□□□□□ -2.03
VPS35YJL154C YPL071CQ02864 156 aa2.36□□□□□ -2.03
VPS35YJL154C VAM6Q07468 1049 aa2.36□□□□□ -2.03
VPS35YJL154C AI5_ALPHAQ9ZZX1 630 aa2.36□□□□□ -2.03
VPS35YJL154C ESP1Q03018 1630 aa2.36□□□□□ -2.03
VPS35YJL154C ILV6P25605 309 aaKnown RBP2.36□□□□□ -2.03
VPS35YJL154C YPT10P38146 199 aa2.36□□□□□ -2.03
VPS35YJL154C QRI1P43123 477 aaKnown RBP2.36□□□□□ -2.03
VPS35YJL154C GTB1Q04924 702 aa2.36□□□□□ -2.03
VPS35YJL154C YPL191CQ08930 360 aa2.36□□□□□ -2.03
VPS35YJL154C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
VPS35YJL154C KGD2P19262 463 aaPredicted RBP2.36□□□□□ -2.03
VPS35YJL154C PMA2P19657 947 aa2.36□□□□□ -2.03
VPS35YJL154C AMD2P22580 549 aa2.36□□□□□ -2.03
VPS35YJL154C LRE1P25579 583 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms