RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W IDP3P53982 420 aaKnown RBP3.15□□□□□ -1.9
SSF1YHR066W YAT1P80235 687 aa3.15□□□□□ -1.9
SSF1YHR066W YPL108WQ02872 168 aaPredicted RBP3.15□□□□□ -1.9
SSF1YHR066W ATG21Q02887 496 aa3.15□□□□□ -1.9
SSF1YHR066W ARA2Q04212 335 aa3.15□□□□□ -1.9
SSF1YHR066W YPL191CQ08930 360 aa3.15□□□□□ -1.9
SSF1YHR066W COX1P00401 534 aa3.14□□□□□ -1.91
SSF1YHR066W SIP1P32578 815 aa3.14□□□□□ -1.91
SSF1YHR066W TMT1P32643 299 aa3.14□□□□□ -1.91
SSF1YHR066W ACA1P39970 489 aa3.14□□□□□ -1.91
SSF1YHR066W VPS27P40343 622 aaKnown RBP3.14□□□□□ -1.91
SSF1YHR066W NOP2P40991 618 aaKnown RBP3.14□□□□□ -1.91
SSF1YHR066W IRC7P43623 340 aa3.14□□□□□ -1.91
SSF1YHR066W YGR079WP53249 370 aa3.14□□□□□ -1.91
SSF1YHR066W UBX4P54730 416 aa3.14□□□□□ -1.91
SSF1YHR066W ERG13P54839 491 aaKnown RBP3.14□□□□□ -1.91
SSF1YHR066W SNU56Q03782 492 aaKnown RBP3.14□□□□□ -1.91
SSF1YHR066W CIA1Q05583 330 aa3.14□□□□□ -1.91
SSF1YHR066W PET122P10355 254 aa3.13□□□□□ -1.91
SSF1YHR066W NCP1P16603 691 aaKnown RBP3.13□□□□□ -1.91
SSF1YHR066W YNL058CP53947 316 aa3.13□□□□□ -1.91
SSF1YHR066W STP1Q00947 519 aa3.13□□□□□ -1.91
SSF1YHR066W YOR389WQ08912 624 aa3.13□□□□□ -1.91
SSF1YHR066W YAP1P19880 650 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W CLB4P24871 460 aa3.12□□□□□ -1.91
SSF1YHR066W HES1P35843 434 aa3.12□□□□□ -1.91
SSF1YHR066W FSH1P38777 243 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W AAT1Q01802 451 aa3.12□□□□□ -1.91
SSF1YHR066W GTB1Q04924 702 aa3.12□□□□□ -1.91
SSF1YHR066W STP3Q05937 343 aa3.12□□□□□ -1.91
SSF1YHR066W CRC1Q12289 327 aa3.12□□□□□ -1.91
SSF1YHR066W RVB2Q12464 471 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W MON2P48563 1636 aaPredicted RBP3.12□□□□□ -1.91
SSF1YHR066W GAL4P04386 881 aa3.12□□□□□ -1.91
SSF1YHR066W ILV2P07342 687 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W PGI1P12709 554 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W PHO81P17442 1178 aa3.12□□□□□ -1.91
SSF1YHR066W MSM1P22438 575 aa3.12□□□□□ -1.91
SSF1YHR066W PTC6P25646 442 aa3.12□□□□□ -1.91
SSF1YHR066W LAC1P28496 418 aa3.12□□□□□ -1.91
SSF1YHR066W GEX2P36173 615 aa3.12□□□□□ -1.91
SSF1YHR066W TPM2P40414 161 aa3.12□□□□□ -1.91
SSF1YHR066W GLO1P50107 326 aa3.12□□□□□ -1.91
SSF1YHR066W YPR003CP53394 754 aa3.12□□□□□ -1.91
SSF1YHR066W PAP2P53632 584 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W ARC35P53731 342 aaKnown RBP3.12□□□□□ -1.91
SSF1YHR066W TRS130Q03660 1102 aa3.12□□□□□ -1.91
SSF1YHR066W GEP3Q08622 556 aa3.12□□□□□ -1.91
SSF1YHR066W LEA1Q08963 238 aaPredicted RBP3.12□□□□□ -1.91
SSF1YHR066W YML003WP0CF16 290 aa3.11□□□□□ -1.91
SSF1YHR066W RFA2P26754 273 aaKnown RBP3.11□□□□□ -1.91
SSF1YHR066W COQ3P27680 312 aa3.11□□□□□ -1.91
SSF1YHR066W SWC3P31376 625 aa3.11□□□□□ -1.91
SSF1YHR066W FUN12P39730 1002 aaKnown RBP3.11□□□□□ -1.91
SSF1YHR066W YIL024CP40543 189 aa3.11□□□□□ -1.91
SSF1YHR066W CDC1P40986 491 aa3.11□□□□□ -1.91
SSF1YHR066W ERR3P42222 437 aa3.11□□□□□ -1.91
SSF1YHR066W GAT1P43574 510 aa3.11□□□□□ -1.91
SSF1YHR066W ZAP1P47043 880 aa3.11□□□□□ -1.91
SSF1YHR066W MSY1P48527 492 aa3.11□□□□□ -1.91
SSF1YHR066W COP1P53622 1201 aaKnown RBP3.11□□□□□ -1.91
SSF1YHR066W MTG1Q03151 367 aaPredicted RBP3.11□□□□□ -1.91
SSF1YHR066W VAM6Q07468 1049 aa3.11□□□□□ -1.91
SSF1YHR066W PFA4Q12006 378 aa3.11□□□□□ -1.91
SSF1YHR066W GET3Q12154 354 aaKnown RBP3.11□□□□□ -1.91
SSF1YHR066W RGT2Q12300 763 aa3.11□□□□□ -1.91
SSF1YHR066W ILS1P09436 1072 aaKnown RBP3.1□□□□□ -1.91
SSF1YHR066W YER190C-BP0CX94 160 aa3.1□□□□□ -1.91
SSF1YHR066W YEL077W-AP0CX95 160 aa3.1□□□□□ -1.91
SSF1YHR066W YGR296C-BP0CX96 160 aa3.1□□□□□ -1.91
SSF1YHR066W YPL283W-BP0CX97 160 aa3.1□□□□□ -1.91
SSF1YHR066W YPR204C-AP0CX98 160 aa3.1□□□□□ -1.91
SSF1YHR066W YSP3P25036 478 aa3.1□□□□□ -1.91
SSF1YHR066W YCL049CP25577 312 aa3.1□□□□□ -1.91
SSF1YHR066W DBF20P32328 564 aa3.1□□□□□ -1.91
SSF1YHR066W EXO84P38261 753 aa3.1□□□□□ -1.91
SSF1YHR066W CFD1P40558 293 aa3.1□□□□□ -1.91
SSF1YHR066W UBX6P47049 396 aa3.1□□□□□ -1.91
SSF1YHR066W YRB30P53107 440 aaPredicted RBP3.1□□□□□ -1.91
SSF1YHR066W YDR109CQ04585 715 aa3.1□□□□□ -1.91
SSF1YHR066W YPT1P01123 206 aaKnown RBP3.09□□□□□ -1.92
SSF1YHR066W PCT1P13259 424 aa3.09□□□□□ -1.92
SSF1YHR066W GCD7P32502 381 aaPredicted RBP3.09□□□□□ -1.92
SSF1YHR066W MNT3P40549 630 aa3.09□□□□□ -1.92
SSF1YHR066W SKP2P42843 763 aa3.09□□□□□ -1.92
SSF1YHR066W ORC5P50874 479 aa3.09□□□□□ -1.92
SSF1YHR066W ADE16P54113 591 aaKnown RBP3.09□□□□□ -1.92
SSF1YHR066W TFC6Q06339 672 aa3.09□□□□□ -1.92
SSF1YHR066W THI3Q07471 609 aa3.09□□□□□ -1.92
SSF1YHR066W PCD1Q12524 340 aa3.09□□□□□ -1.92
SSF1YHR066W MTF2P10849 440 aa3.08□□□□□ -1.92
SSF1YHR066W LRE1P25579 583 aaKnown RBP3.08□□□□□ -1.92
SSF1YHR066W IFA38P38286 347 aa3.08□□□□□ -1.92
SSF1YHR066W FLO5P38894 1075 aa3.08□□□□□ -1.92
SSF1YHR066W IES5P40060 125 aa3.08□□□□□ -1.92
SSF1YHR066W PSF2P40359 213 aa3.08□□□□□ -1.92
SSF1YHR066W YJL107CP42947 387 aa3.08□□□□□ -1.92
SSF1YHR066W RPL15BP54780 204 aaPredicted RBP3.08□□□□□ -1.92
SSF1YHR066W ATG23Q06671 453 aa3.08□□□□□ -1.92
SSF1YHR066W BAG7Q12128 409 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms