RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YLR346CQ06139 101 aa8.16□□□□□ -1.1
UFD1YGR048W YRM1Q12340 786 aa8.16□□□□□ -1.1
UFD1YGR048W RTR2Q12378 196 aa8.16□□□□□ -1.1
UFD1YGR048W ADF1Q2V2Q1 113 aa8.16□□□□□ -1.1
UFD1YGR048W TUB3P09734 445 aaKnown RBP8.15□□□□□ -1.1
UFD1YGR048W KSS1P14681 368 aa8.15□□□□□ -1.1
UFD1YGR048W ATP12P22135 325 aa8.15□□□□□ -1.1
UFD1YGR048W TPS2P31688 896 aaKnown RBP8.15□□□□□ -1.1
UFD1YGR048W ECM31P38122 312 aa8.15□□□□□ -1.1
UFD1YGR048W SLX1P38324 304 aa8.15□□□□□ -1.1
UFD1YGR048W VHC1P38329 1120 aa8.15□□□□□ -1.1
UFD1YGR048W MTW1P39731 289 aa8.15□□□□□ -1.1
UFD1YGR048W YMR147WP40218 223 aaKnown RBP8.15□□□□□ -1.1
UFD1YGR048W OCA1P50946 238 aaPredicted RBP8.15□□□□□ -1.1
UFD1YGR048W INA17Q02888 182 aa8.15□□□□□ -1.1
UFD1YGR048W NSE5Q03718 556 aa8.15□□□□□ -1.1
UFD1YGR048W GIS4Q04233 774 aa8.15□□□□□ -1.1
UFD1YGR048W SMD2Q06217 110 aaKnown RBP8.15□□□□□ -1.1
UFD1YGR048W TRM8Q12009 286 aa8.15□□□□□ -1.1
UFD1YGR048W MED2Q12124 431 aa8.15□□□□□ -1.1
UFD1YGR048W FMP16Q12497 93 aa8.15□□□□□ -1.1
UFD1YGR048W GCR1P07261 785 aa8.14□□□□□ -1.11
UFD1YGR048W GLN4P13188 809 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W DBF2P22204 572 aa8.14□□□□□ -1.11
UFD1YGR048W MCM5P29496 775 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W GPI10P30777 616 aa8.14□□□□□ -1.11
UFD1YGR048W VMA6P32366 345 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W TAF14P35189 244 aa8.14□□□□□ -1.11
UFD1YGR048W TEF4P36008 412 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W MIA40P36046 403 aa8.14□□□□□ -1.11
UFD1YGR048W GRS1P38088 690 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W MAK5P38112 773 aaPredicted RBP8.14□□□□□ -1.11
UFD1YGR048W GRE3P38715 327 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
UFD1YGR048W YHI9P38765 294 aa8.14□□□□□ -1.11
UFD1YGR048W RRF1P38771 230 aa8.14□□□□□ -1.11
UFD1YGR048W NMD3P38861 518 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W PSF2P40359 213 aa8.14□□□□□ -1.11
UFD1YGR048W PCI8P40512 444 aa8.14□□□□□ -1.11
UFD1YGR048W HXT8P40886 569 aa8.14□□□□□ -1.11
UFD1YGR048W MSS2P40990 351 aa8.14□□□□□ -1.11
UFD1YGR048W SNZ3P43545 298 aa8.14□□□□□ -1.11
UFD1YGR048W STB4P50104 949 aa8.14□□□□□ -1.11
UFD1YGR048W NUP84P52891 726 aa8.14□□□□□ -1.11
UFD1YGR048W MAL11P53048 616 aa8.14□□□□□ -1.11
UFD1YGR048W PEF1P53238 335 aa8.14□□□□□ -1.11
UFD1YGR048W MRPL50P53724 139 aa8.14□□□□□ -1.11
UFD1YGR048W SNZ2P53824 298 aa8.14□□□□□ -1.11
UFD1YGR048W SKI8Q02793 397 aaPredicted RBP8.14□□□□□ -1.11
UFD1YGR048W PRP42Q03776 544 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W GAL83Q04739 417 aa8.14□□□□□ -1.11
UFD1YGR048W ISR1Q06098 443 aaKnown RBP8.14□□□□□ -1.11
UFD1YGR048W NTG2Q08214 380 aa8.14□□□□□ -1.11
UFD1YGR048W ENT1Q12518 454 aa8.14□□□□□ -1.11
UFD1YGR048W YBR298C-AQ8TGK4 73 aa8.14□□□□□ -1.11
UFD1YGR048W URA3P03962 267 aa8.13□□□□□ -1.11
UFD1YGR048W KAR1P11927 433 aa8.13□□□□□ -1.11
UFD1YGR048W MIP1P15801 1254 aa8.13□□□□□ -1.11
UFD1YGR048W HXT2P23585 541 aa8.13□□□□□ -1.11
UFD1YGR048W CPR3P25719 182 aa8.13□□□□□ -1.11
UFD1YGR048W PEP12P32854 288 aa8.13□□□□□ -1.11
UFD1YGR048W CPR5P35176 225 aa8.13□□□□□ -1.11
UFD1YGR048W YHL050CP38721 697 aa8.13□□□□□ -1.11
UFD1YGR048W END3P39013 349 aa8.13□□□□□ -1.11
UFD1YGR048W GEM1P39722 662 aa8.13□□□□□ -1.11
UFD1YGR048W JLP2P40206 208 aa8.13□□□□□ -1.11
UFD1YGR048W THI6P41835 540 aa8.13□□□□□ -1.11
UFD1YGR048W YGR210CP42942 411 aa8.13□□□□□ -1.11
UFD1YGR048W YFL066CP43538 392 aa8.13□□□□□ -1.11
UFD1YGR048W YJR098CP47139 656 aa8.13□□□□□ -1.11
UFD1YGR048W BPL1P48445 690 aaPredicted RBP8.13□□□□□ -1.11
UFD1YGR048W DIE2P50076 525 aa8.13□□□□□ -1.11
UFD1YGR048W NUT1P53114 1132 aa8.13□□□□□ -1.11
UFD1YGR048W CGR1P53188 120 aa8.13□□□□□ -1.11
UFD1YGR048W YTP1P53584 459 aa8.13□□□□□ -1.11
UFD1YGR048W CAF120P53836 1060 aa8.13□□□□□ -1.11
UFD1YGR048W RSC4Q02206 625 aa8.13□□□□□ -1.11
UFD1YGR048W ARX1Q03862 593 aaKnown RBP8.13□□□□□ -1.11
UFD1YGR048W YMR027WQ04371 470 aa8.13□□□□□ -1.11
UFD1YGR048W ASA1Q06822 443 aa8.13□□□□□ -1.11
UFD1YGR048W DTD1Q07648 150 aaKnown RBP8.13□□□□□ -1.11
UFD1YGR048W FMP45Q07651 309 aa8.13□□□□□ -1.11
UFD1YGR048W YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
UFD1YGR048W DIS3Q08162 1001 aaKnown RBP8.13□□□□□ -1.11
UFD1YGR048W HRK1Q08732 759 aaKnown RBP8.13□□□□□ -1.11
UFD1YGR048W YDL176WQ12027 708 aa8.13□□□□□ -1.11
UFD1YGR048W YOR342CQ12182 319 aa8.13□□□□□ -1.11
UFD1YGR048W ATG31Q12421 196 aa8.13□□□□□ -1.11
UFD1YGR048W RRP36Q12481 300 aaPredicted RBP8.13□□□□□ -1.11
UFD1YGR048W FOB1O13329 566 aa8.12□□□□□ -1.11
UFD1YGR048W TRP2P00899 507 aaKnown RBP8.12□□□□□ -1.11
UFD1YGR048W SIR3P06701 978 aa8.12□□□□□ -1.11
UFD1YGR048W CDC24P11433 854 aaPredicted RBP8.12□□□□□ -1.11
UFD1YGR048W CKA2P19454 339 aa8.12□□□□□ -1.11
UFD1YGR048W MRPL33P20084 86 aa8.12□□□□□ -1.11
UFD1YGR048W VPS33P20795 691 aa8.12□□□□□ -1.11
UFD1YGR048W SAN1P22470 610 aa8.12□□□□□ -1.11
UFD1YGR048W GFD2P25370 566 aaKnown RBP8.12□□□□□ -1.11
UFD1YGR048W AAD3P25612 363 aa8.12□□□□□ -1.11
UFD1YGR048W YBL010CP32788 280 aa8.12□□□□□ -1.11
UFD1YGR048W RPT1P33299 467 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms