RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C TRF5P48561 642 aaKnown RBP13.08□□□□□ -0.32
PHO4YFR034C BUD32P53323 261 aa13.08□□□□□ -0.32
PHO4YFR034C RNY1Q02933 434 aaKnown RBP13.08□□□□□ -0.32
PHO4YFR034C ATP12P22135 325 aa13.07□□□□□ -0.32
PHO4YFR034C MSH2P25847 964 aa13.07□□□□□ -0.32
PHO4YFR034C STE13P33894 931 aa13.07□□□□□ -0.32
PHO4YFR034C YHI9P38765 294 aa13.07□□□□□ -0.32
PHO4YFR034C ELO3P40319 345 aa13.07□□□□□ -0.32
PHO4YFR034C NNF2P53253 936 aa13.07□□□□□ -0.32
PHO4YFR034C BUD20Q08004 166 aaPredicted RBP13.07□□□□□ -0.32
PHO4YFR034C PGC1Q08959 321 aa13.07□□□□□ -0.32
PHO4YFR034C OCA6Q12454 224 aa13.07□□□□□ -0.32
PHO4YFR034C YMR030W-AQ3E760 96 aa13.07□□□□□ -0.32
PHO4YFR034C HSP26P15992 214 aaKnown RBP RIP-Chip data13.06□□□□□ -0.32not detected
PHO4YFR034C SEC6P32844 805 aa13.06□□□□□ -0.32
PHO4YFR034C RRN3P36070 627 aa13.06□□□□□ -0.32
PHO4YFR034C YDR089WP38966 869 aa13.06□□□□□ -0.32
PHO4YFR034C MEF2P39677 819 aa13.06□□□□□ -0.32
PHO4YFR034C VAC8P39968 578 aa13.06□□□□□ -0.32
PHO4YFR034C ARC1P46672 376 aaKnown RBP13.06□□□□□ -0.32
PHO4YFR034C MAD3P47074 515 aa13.06□□□□□ -0.32
PHO4YFR034C RNR4P49723 345 aaKnown RBP13.06□□□□□ -0.32
PHO4YFR034C TIM13P53299 105 aa13.06□□□□□ -0.32
PHO4YFR034C IST1P53843 298 aaPredicted RBP13.06□□□□□ -0.32
PHO4YFR034C FMN1Q03778 218 aa13.06□□□□□ -0.32
PHO4YFR034C GTB1Q04924 702 aa13.06□□□□□ -0.32
PHO4YFR034C OSW1Q08692 278 aa13.06□□□□□ -0.32
PHO4YFR034C NDJ1Q12366 352 aa13.06□□□□□ -0.32
PHO4YFR034C ARD1P07347 238 aaPredicted RBP13.05□□□□□ -0.32
PHO4YFR034C MIS1P09440 975 aaKnown RBP13.05□□□□□ -0.32
PHO4YFR034C EXO70P19658 623 aa13.05□□□□□ -0.32
PHO4YFR034C NPP1P25353 742 aa13.05□□□□□ -0.32
PHO4YFR034C SNT1P25357 1226 aa13.05□□□□□ -0.32
PHO4YFR034C RAD16P31244 790 aa13.05□□□□□ -0.32
PHO4YFR034C SSE1P32589 693 aaKnown RBP13.05□□□□□ -0.32
PHO4YFR034C RRD1P40454 393 aaKnown RBP13.05□□□□□ -0.32
PHO4YFR034C RRN7P40992 514 aa13.05□□□□□ -0.32
PHO4YFR034C TRM112P53738 135 aaPredicted RBP13.05□□□□□ -0.32
PHO4YFR034C DOS2P54858 310 aa13.05□□□□□ -0.32
PHO4YFR034C CDC14Q00684 551 aa13.05□□□□□ -0.32
PHO4YFR034C UBP2Q01476 1272 aa13.05□□□□□ -0.32
PHO4YFR034C TVP15Q03860 143 aa13.05□□□□□ -0.32
PHO4YFR034C LPX1Q12405 387 aaKnown RBP13.05□□□□□ -0.32
PHO4YFR034C VAN1P23642 535 aa13.04□□□□□ -0.32
PHO4YFR034C WHI3P34761 661 aaKnown RBP13.04□□□□□ -0.32
PHO4YFR034C ADD66P36040 267 aa13.04□□□□□ -0.32
PHO4YFR034C BTT1P40314 149 aaPredicted RBP13.04□□□□□ -0.32
PHO4YFR034C SEC28P40509 296 aaKnown RBP13.04□□□□□ -0.32
PHO4YFR034C YIR016WP40572 265 aa13.04□□□□□ -0.32
PHO4YFR034C UFE1P41834 346 aa13.04□□□□□ -0.32
PHO4YFR034C UTP8P53276 713 aaKnown RBP13.04□□□□□ -0.32
PHO4YFR034C TRS31Q03337 283 aa13.04□□□□□ -0.32
PHO4YFR034C PWP1P21304 576 aaKnown RBP13.03□□□□□ -0.32
PHO4YFR034C PDE1P22434 369 aa13.03□□□□□ -0.32
PHO4YFR034C MLS1P30952 554 aa13.03□□□□□ -0.32
PHO4YFR034C MRP21P38175 177 aa13.03□□□□□ -0.32
PHO4YFR034C FZO1P38297 855 aa13.03□□□□□ -0.32
PHO4YFR034C NUP60P39705 539 aa13.03□□□□□ -0.32
PHO4YFR034C JHD1P40034 492 aa13.03□□□□□ -0.32
PHO4YFR034C MMF1P40185 145 aaKnown RBP13.03□□□□□ -0.32
PHO4YFR034C HOS4P40480 1083 aa13.03□□□□□ -0.32
PHO4YFR034C BST1P43571 1029 aa13.03□□□□□ -0.32
PHO4YFR034C UBP6P43593 499 aaKnown RBP13.03□□□□□ -0.32
PHO4YFR034C ASN2P49090 572 aaKnown RBP13.03□□□□□ -0.32
PHO4YFR034C PRP24P49960 444 aaKnown RBP13.03□□□□□ -0.32
PHO4YFR034C MRM2P53123 320 aa13.03□□□□□ -0.32
PHO4YFR034C MET13P53128 600 aa13.03□□□□□ -0.32
PHO4YFR034C ADE12P80210 433 aaKnown RBP13.03□□□□□ -0.32
PHO4YFR034C MNL2Q12205 849 aa13.03□□□□□ -0.32
PHO4YFR034C STB3Q12427 513 aa13.03□□□□□ -0.32
PHO4YFR034C ACO1P19414 778 aaKnown RBP RIP-Chip data13.02□□□□□ -0.33not detected
PHO4YFR034C MET22P32179 357 aa13.02□□□□□ -0.33
PHO4YFR034C GCD11P32481 527 aaKnown RBP13.02□□□□□ -0.33
PHO4YFR034C TGL4P36165 910 aa13.02□□□□□ -0.33
PHO4YFR034C KTR7P40504 517 aa13.02□□□□□ -0.33
PHO4YFR034C IST3P40565 148 aaPredicted RBP13.02□□□□□ -0.33
PHO4YFR034C TEL2P53038 688 aa13.02□□□□□ -0.33
PHO4YFR034C TFB2Q02939 513 aa13.02□□□□□ -0.33
PHO4YFR034C EMI2Q04409 500 aaKnown RBP13.02□□□□□ -0.33
PHO4YFR034C ECM38Q05902 660 aaPredicted RBP13.02□□□□□ -0.33
PHO4YFR034C LDB18Q07887 179 aa13.02□□□□□ -0.33
PHO4YFR034C TMA46Q12000 345 aaKnown RBP13.02□□□□□ -0.33
PHO4YFR034C APC9Q12107 265 aa13.02□□□□□ -0.33
PHO4YFR034C CHS5Q12114 671 aaKnown RBP13.02□□□□□ -0.33
PHO4YFR034C YHL041WP38730 149 aa13.01□□□□□ -0.33
PHO4YFR034C YHR182WP38870 785 aa13.01□□□□□ -0.33
PHO4YFR034C STN1P38960 494 aa13.01□□□□□ -0.33
PHO4YFR034C SEO1P39709 593 aa13.01□□□□□ -0.33
PHO4YFR034C RSC8P43609 557 aaKnown RBP13.01□□□□□ -0.33
PHO4YFR034C STR3P53101 465 aaKnown RBP13.01□□□□□ -0.33
PHO4YFR034C NOP15P53927 220 aaPredicted RBP13.01□□□□□ -0.33
PHO4YFR034C RSC4Q02206 625 aa13.01□□□□□ -0.33
PHO4YFR034C LGE1Q02796 332 aaKnown RBP13.01□□□□□ -0.33
PHO4YFR034C SYT1Q06836 1226 aa13.01□□□□□ -0.33
PHO4YFR034C GNT1Q12096 491 aa13.01□□□□□ -0.33
PHO4YFR034C CLN1P20437 546 aa13□□□□□ -0.33
PHO4YFR034C VAC17P25591 423 aa13□□□□□ -0.33
PHO4YFR034C PSE1P32337 1089 aaKnown RBP13□□□□□ -0.33
PHO4YFR034C KAR9P32526 644 aa13□□□□□ -0.33
PHO4YFR034C ATG12P38316 186 aa13□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 109.6 ms