RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W MAK32P23060 363 aa2.85□□□□□ -1.95
NIC96YFR002W PHO3P24031 467 aa2.85□□□□□ -1.95
NIC96YFR002W PRE2P30656 287 aaKnown RBP2.85□□□□□ -1.95
NIC96YFR002W ARO9P38840 513 aaPredicted RBP2.85□□□□□ -1.95
NIC96YFR002W SCS2P40075 244 aaKnown RBP2.85□□□□□ -1.95
NIC96YFR002W UBP16Q02863 499 aa2.85□□□□□ -1.95
NIC96YFR002W ENT2Q05785 613 aa2.85□□□□□ -1.95
NIC96YFR002W YAP1P19880 650 aaKnown RBP2.85□□□□□ -1.95
NIC96YFR002W YCR061WP25639 631 aa2.85□□□□□ -1.95
NIC96YFR002W IMD2P38697 523 aaKnown RBP2.85□□□□□ -1.95
NIC96YFR002W IMD3P50095 523 aaKnown RBP2.85□□□□□ -1.95
NIC96YFR002W FOL1P53848 824 aa2.85□□□□□ -1.95
NIC96YFR002W YPL068CQ02749 293 aa2.85□□□□□ -1.95
NIC96YFR002W TRS31Q03337 283 aa2.85□□□□□ -1.95
NIC96YFR002W TRI1Q05024 226 aa2.85□□□□□ -1.95
NIC96YFR002W CRC1Q12289 327 aa2.85□□□□□ -1.95
NIC96YFR002W YOR1P53049 1477 aa2.85□□□□□ -1.95
NIC96YFR002W SNQ2P32568 1501 aaKnown RBP2.85□□□□□ -1.95
NIC96YFR002W TGL1P34163 548 aa2.84□□□□□ -1.95
NIC96YFR002W MAM1P40065 302 aa2.84□□□□□ -1.95
NIC96YFR002W POL31P46957 487 aa2.84□□□□□ -1.95
NIC96YFR002W IDS2P46958 469 aa2.84□□□□□ -1.95
NIC96YFR002W COG2P53271 262 aa2.84□□□□□ -1.95
NIC96YFR002W YPL071CQ02864 156 aa2.84□□□□□ -1.95
NIC96YFR002W NUR1Q12066 484 aa2.84□□□□□ -1.95
NIC96YFR002W ADH4P10127 382 aa2.84□□□□□ -1.96
NIC96YFR002W MRC1P25588 1096 aa2.84□□□□□ -1.96
NIC96YFR002W MTG2P38860 518 aa2.84□□□□□ -1.96
NIC96YFR002W SAP1P39955 897 aaKnown RBP2.84□□□□□ -1.96
NIC96YFR002W IMA5P40884 581 aa2.84□□□□□ -1.96
NIC96YFR002W YJR008WP47085 338 aa2.84□□□□□ -1.96
NIC96YFR002W ACS1Q01574 713 aa2.84□□□□□ -1.96
NIC96YFR002W RAD34Q06665 692 aa2.84□□□□□ -1.96
NIC96YFR002W YDL242WQ07746 117 aa2.84□□□□□ -1.96
NIC96YFR002W BI2P03873 423 aa2.83□□□□□ -1.96
NIC96YFR002W VAS1P07806 1104 aaKnown RBP2.83□□□□□ -1.96
NIC96YFR002W KES1P35844 434 aaKnown RBP2.83□□□□□ -1.96
NIC96YFR002W FTH1P38310 465 aa2.83□□□□□ -1.96
NIC96YFR002W VMR1P38735 1592 aa2.83□□□□□ -1.96
NIC96YFR002W VFA1P40080 203 aa2.83□□□□□ -1.96
NIC96YFR002W LAS21P40367 830 aa2.83□□□□□ -1.96
NIC96YFR002W CNM67P53865 581 aaKnown RBP2.83□□□□□ -1.96
NIC96YFR002W BCK1Q01389 1478 aa2.83□□□□□ -1.96
NIC96YFR002W MAK10Q02197 733 aa2.83□□□□□ -1.96
NIC96YFR002W PLM2Q04383 521 aa2.83□□□□□ -1.96
NIC96YFR002W RTC1Q08281 1341 aa2.83□□□□□ -1.96
NIC96YFR002W POL1P13382 1468 aa2.83□□□□□ -1.96
NIC96YFR002W CET1O13297 549 aaPredicted RBP2.83□□□□□ -1.96
NIC96YFR002W YER190C-BP0CX94 160 aa2.83□□□□□ -1.96
NIC96YFR002W YEL077W-AP0CX95 160 aa2.83□□□□□ -1.96
NIC96YFR002W YGR296C-BP0CX96 160 aa2.83□□□□□ -1.96
NIC96YFR002W YPL283W-BP0CX97 160 aa2.83□□□□□ -1.96
NIC96YFR002W YPR204C-AP0CX98 160 aa2.83□□□□□ -1.96
NIC96YFR002W KGD2P19262 463 aaPredicted RBP2.83□□□□□ -1.96
NIC96YFR002W ARB1P40024 610 aaKnown RBP2.83□□□□□ -1.96
NIC96YFR002W RAD26P40352 1085 aa2.83□□□□□ -1.96
NIC96YFR002W MNT3P40549 630 aa2.83□□□□□ -1.96
NIC96YFR002W IRC7P43623 340 aa2.83□□□□□ -1.96
NIC96YFR002W YML053CQ04978 212 aa2.83□□□□□ -1.96
NIC96YFR002W YBT1P32386 1661 aa2.83□□□□□ -1.96
NIC96YFR002W RPS7AP26786 190 aaKnown RBP2.82□□□□□ -1.96
NIC96YFR002W RRP8P38961 392 aaKnown RBP2.82□□□□□ -1.96
NIC96YFR002W SWD1P39706 426 aa2.82□□□□□ -1.96
NIC96YFR002W YIL024CP40543 189 aa2.82□□□□□ -1.96
NIC96YFR002W CIN1P40987 1014 aa2.82□□□□□ -1.96
NIC96YFR002W CIR1P42940 261 aa2.82□□□□□ -1.96
NIC96YFR002W YNL034WP53963 612 aa2.82□□□□□ -1.96
NIC96YFR002W YER175W-AQ8TGU4 54 aa2.82□□□□□ -1.96
NIC96YFR002W YRF1-2P40105 1681 aa2.82□□□□□ -1.96
NIC96YFR002W YPT1P01123 206 aaKnown RBP2.82□□□□□ -1.96
NIC96YFR002W SSB1P11484 613 aaKnown RBP2.82□□□□□ -1.96
NIC96YFR002W YLF2P38746 405 aa2.82□□□□□ -1.96
NIC96YFR002W SSB2P40150 613 aaKnown RBP2.82□□□□□ -1.96
NIC96YFR002W COP1P53622 1201 aaKnown RBP2.82□□□□□ -1.96
NIC96YFR002W TGL2P54857 326 aa2.82□□□□□ -1.96
NIC96YFR002W CEG1Q01159 459 aaPredicted RBP2.82□□□□□ -1.96
NIC96YFR002W CRF1Q04930 467 aa2.82□□□□□ -1.96
NIC96YFR002W SES1P07284 462 aaKnown RBP2.81□□□□□ -1.96
NIC96YFR002W ASK1P35734 292 aa2.81□□□□□ -1.96
NIC96YFR002W JHD1P40034 492 aa2.81□□□□□ -1.96
NIC96YFR002W PCI8P40512 444 aa2.81□□□□□ -1.96
NIC96YFR002W SCW4P53334 386 aaKnown RBP2.81□□□□□ -1.96
NIC96YFR002W SNU56Q03782 492 aaKnown RBP2.81□□□□□ -1.96
NIC96YFR002W LYS21Q12122 440 aaKnown RBP2.81□□□□□ -1.96
NIC96YFR002W TAF5P38129 798 aa2.81□□□□□ -1.96
NIC96YFR002W ERV46P39727 415 aa2.81□□□□□ -1.96
NIC96YFR002W SAW1P39735 261 aa2.81□□□□□ -1.96
NIC96YFR002W IRC8P47046 822 aa2.81□□□□□ -1.96
NIC96YFR002W RTS3P53289 263 aa2.81□□□□□ -1.96
NIC96YFR002W NUP188P52593 1655 aaKnown RBP2.81□□□□□ -1.96
NIC96YFR002W GAL4P04386 881 aa2.8□□□□□ -1.96
NIC96YFR002W COQ3P27680 312 aa2.8□□□□□ -1.96
NIC96YFR002W SDS22P36047 338 aa2.8□□□□□ -1.96
NIC96YFR002W YAP3P38749 330 aa2.8□□□□□ -1.96
NIC96YFR002W LNP1P38878 278 aa2.8□□□□□ -1.96
NIC96YFR002W UBP7P40453 1071 aa2.8□□□□□ -1.96
NIC96YFR002W CFD1P40558 293 aa2.8□□□□□ -1.96
NIC96YFR002W NOP2P40991 618 aaKnown RBP2.8□□□□□ -1.96
NIC96YFR002W ARA2Q04212 335 aa2.8□□□□□ -1.96
NIC96YFR002W TDA9Q04545 1251 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms