RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W CWH43P25618 953 aa3.97□□□□□ -1.77
PRE1YER012W SDH8P38345 138 aa3.97□□□□□ -1.77
PRE1YER012W COS12P53053 380 aa3.97□□□□□ -1.77
PRE1YER012W MTD1Q02046 320 aaKnown RBP3.97□□□□□ -1.77
PRE1YER012W CRT10Q08226 957 aa3.97□□□□□ -1.77
PRE1YER012W BUD21Q08492 214 aaPredicted RBP3.97□□□□□ -1.77
PRE1YER012W VPS5Q92331 675 aa3.97□□□□□ -1.77
PRE1YER012W AIM44Q99299 758 aa3.97□□□□□ -1.77
PRE1YER012W GAL4P04386 881 aa3.96□□□□□ -1.78
PRE1YER012W SPC97P38863 823 aa3.96□□□□□ -1.78
PRE1YER012W YML053CQ04978 212 aa3.96□□□□□ -1.78
PRE1YER012W YOR389WQ08912 624 aa3.96□□□□□ -1.78
PRE1YER012W KRE5P22023 1365 aa3.96□□□□□ -1.78
PRE1YER012W GCN2P15442 1659 aa3.95□□□□□ -1.78
PRE1YER012W COQ3P27680 312 aa3.95□□□□□ -1.78
PRE1YER012W FTH1P38310 465 aa3.95□□□□□ -1.78
PRE1YER012W SAP1P39955 897 aaKnown RBP3.95□□□□□ -1.78
PRE1YER012W CIN1P40987 1014 aa3.95□□□□□ -1.78
PRE1YER012W RPL15BP54780 204 aaPredicted RBP3.95□□□□□ -1.78
PRE1YER012W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
PRE1YER012W MAK32P23060 363 aa3.94□□□□□ -1.78
PRE1YER012W VPS8P39702 1274 aa3.94□□□□□ -1.78
PRE1YER012W NIT2P47016 307 aa3.94□□□□□ -1.78
PRE1YER012W SPC105P53148 917 aa3.94□□□□□ -1.78
PRE1YER012W ENT2Q05785 613 aa3.94□□□□□ -1.78
PRE1YER012W SNA4Q07549 140 aa3.94□□□□□ -1.78
PRE1YER012W PFA4Q12006 378 aa3.94□□□□□ -1.78
PRE1YER012W HOS1Q12214 470 aa3.94□□□□□ -1.78
PRE1YER012W TY3B-IQ7LHG5 1498 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W COX11P19516 300 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W YCP4P25349 247 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W MGM1P32266 881 aa3.93□□□□□ -1.78
PRE1YER012W RPT3P33298 428 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W GND1P38720 489 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W ARO9P38840 513 aaPredicted RBP3.93□□□□□ -1.78
PRE1YER012W CFD1P40558 293 aa3.93□□□□□ -1.78
PRE1YER012W MAD2P40958 196 aa3.93□□□□□ -1.78
PRE1YER012W MAF1P41910 395 aa3.93□□□□□ -1.78
PRE1YER012W DUG1P43616 481 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W LYS20P48570 428 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W COG2P53271 262 aa3.93□□□□□ -1.78
PRE1YER012W LSC1P53598 329 aaKnown RBP3.93□□□□□ -1.78
PRE1YER012W YNR071CP53757 342 aa3.93□□□□□ -1.78
PRE1YER012W CFT1Q06632 1357 aaKnown RBP3.92□□□□□ -1.78
PRE1YER012W PRE2P30656 287 aaKnown RBP3.92□□□□□ -1.78
PRE1YER012W RGT1P32862 1170 aa3.92□□□□□ -1.78
PRE1YER012W GCS1P35197 352 aa3.92□□□□□ -1.78
PRE1YER012W DIN7Q12086 430 aa3.92□□□□□ -1.78
PRE1YER012W YPT1P01123 206 aaKnown RBP3.91□□□□□ -1.78
PRE1YER012W CBP3P21560 335 aa3.91□□□□□ -1.78
PRE1YER012W PET309P32522 965 aaPredicted RBP3.91□□□□□ -1.78
PRE1YER012W FPR3P38911 411 aaKnown RBP3.91□□□□□ -1.78
PRE1YER012W ERV46P39727 415 aa3.91□□□□□ -1.78
PRE1YER012W YIR016WP40572 265 aa3.91□□□□□ -1.78
PRE1YER012W PLM2Q04383 521 aa3.91□□□□□ -1.78
PRE1YER012W MRPL1Q04599 285 aa3.91□□□□□ -1.78
PRE1YER012W RAD34Q06665 692 aa3.91□□□□□ -1.78
PRE1YER012W LCB4Q12246 624 aa3.91□□□□□ -1.78
PRE1YER012W CHO2P05374 869 aaKnown RBP3.9□□□□□ -1.79
PRE1YER012W IDS2P46958 469 aa3.9□□□□□ -1.79
PRE1YER012W YDL242WQ07746 117 aa3.9□□□□□ -1.79
PRE1YER012W BCK1Q01389 1478 aa3.9□□□□□ -1.79
PRE1YER012W TY4B-HP0C2J7 1802 aa3.9□□□□□ -1.79
PRE1YER012W TY4B-JP47024 1803 aa3.9□□□□□ -1.79
PRE1YER012W RAD9P14737 1309 aa3.9□□□□□ -1.79
PRE1YER012W RRP5Q05022 1729 aaKnown RBP3.9□□□□□ -1.79
PRE1YER012W CET1O13297 549 aaPredicted RBP3.89□□□□□ -1.79
PRE1YER012W PLC1P32383 869 aa3.89□□□□□ -1.79
PRE1YER012W LNP1P38878 278 aa3.89□□□□□ -1.79
PRE1YER012W STL1P39932 569 aa3.89□□□□□ -1.79
PRE1YER012W GSM1P42950 618 aa3.89□□□□□ -1.79
PRE1YER012W YJR120WP47157 116 aa3.89□□□□□ -1.79
PRE1YER012W IKI3Q06706 1349 aaKnown RBP3.89□□□□□ -1.79
PRE1YER012W AIM17P23180 465 aaKnown RBP3.88□□□□□ -1.79
PRE1YER012W HEM12P32347 362 aaPredicted RBP3.88□□□□□ -1.79
PRE1YER012W ATO2P32907 282 aa3.88□□□□□ -1.79
PRE1YER012W SCO2P38072 301 aa3.88□□□□□ -1.79
PRE1YER012W YEN1P40028 759 aa3.88□□□□□ -1.79
PRE1YER012W MAM1P40065 302 aa3.88□□□□□ -1.79
PRE1YER012W CIR1P42940 261 aa3.88□□□□□ -1.79
PRE1YER012W NUP53Q03790 475 aa3.88□□□□□ -1.79
PRE1YER012W BUD7Q08754 746 aa3.88□□□□□ -1.79
PRE1YER012W NEW1Q08972 1196 aaKnown RBP3.88□□□□□ -1.79
PRE1YER012W YER175W-AQ8TGU4 54 aa3.88□□□□□ -1.79
PRE1YER012W ILS1P09436 1072 aaKnown RBP3.87□□□□□ -1.79
PRE1YER012W SEC18P18759 758 aaKnown RBP3.87□□□□□ -1.79
PRE1YER012W KES1P35844 434 aaKnown RBP3.87□□□□□ -1.79
PRE1YER012W LAS21P40367 830 aa3.87□□□□□ -1.79
PRE1YER012W MDV1P47025 714 aa3.87□□□□□ -1.79
PRE1YER012W SLD3P53135 668 aa3.87□□□□□ -1.79
PRE1YER012W ACS1Q01574 713 aa3.87□□□□□ -1.79
PRE1YER012W AAT1Q01802 451 aa3.87□□□□□ -1.79
PRE1YER012W TRE2Q08693 809 aa3.87□□□□□ -1.79
PRE1YER012W LYS21Q12122 440 aaKnown RBP3.87□□□□□ -1.79
PRE1YER012W DBP10Q12389 995 aaKnown RBP3.87□□□□□ -1.79
PRE1YER012W RPS7AP26786 190 aaKnown RBP3.86□□□□□ -1.79
PRE1YER012W UBP12P39538 1254 aa3.86□□□□□ -1.79
PRE1YER012W UBP7P40453 1071 aa3.86□□□□□ -1.79
PRE1YER012W ARA2Q04212 335 aa3.86□□□□□ -1.79
PRE1YER012W CRF1Q04930 467 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms