RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SPS1P08458 490 aa3.41□□□□□ -1.86
SIZ1YDR409W POL3P15436 1097 aa3.41□□□□□ -1.86
SIZ1YDR409W ACO1P19414 778 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SIZ1YDR409W RET1P22276 1149 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W HOG1P32485 435 aa3.41□□□□□ -1.86
SIZ1YDR409W VRP1P37370 817 aa3.41□□□□□ -1.86
SIZ1YDR409W YBL028CP38202 106 aa3.41□□□□□ -1.86
SIZ1YDR409W SIF2P38262 535 aa3.41□□□□□ -1.86
SIZ1YDR409W RFC3P38629 340 aa3.41□□□□□ -1.86
SIZ1YDR409W MEF2P39677 819 aa3.41□□□□□ -1.86
SIZ1YDR409W NUP60P39705 539 aa3.41□□□□□ -1.86
SIZ1YDR409W YEL068CP39977 110 aa3.41□□□□□ -1.86
SIZ1YDR409W POL31P46957 487 aa3.41□□□□□ -1.86
SIZ1YDR409W YNR040WP53736 256 aa3.41□□□□□ -1.86
SIZ1YDR409W MTG1Q03151 367 aaPredicted RBP3.41□□□□□ -1.86
SIZ1YDR409W SYF1Q04048 859 aaPredicted RBP3.41□□□□□ -1.86
SIZ1YDR409W GSF2Q04697 403 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W INM2Q05533 292 aa3.41□□□□□ -1.86
SIZ1YDR409W YSH1Q06224 779 aaPredicted RBP3.41□□□□□ -1.86
SIZ1YDR409W YDL124WQ07551 312 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W APC5Q08683 685 aa3.41□□□□□ -1.86
SIZ1YDR409W TCO89Q08921 799 aa3.41□□□□□ -1.86
SIZ1YDR409W WTM2Q12206 467 aa3.41□□□□□ -1.86
SIZ1YDR409W NFI1Q12216 726 aa3.41□□□□□ -1.86
SIZ1YDR409W SPS22P25380 463 aa3.41□□□□□ -1.86
SIZ1YDR409W CAP1P28495 268 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W VPH2P32341 215 aa3.41□□□□□ -1.86
SIZ1YDR409W EFB1P32471 206 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W XRS2P33301 854 aa3.41□□□□□ -1.86
SIZ1YDR409W SLA2P33338 968 aa3.41□□□□□ -1.86
SIZ1YDR409W TRM2P33753 639 aa3.41□□□□□ -1.86
SIZ1YDR409W YKL100CP34248 587 aa3.41□□□□□ -1.86
SIZ1YDR409W NEM1P38757 446 aa3.41□□□□□ -1.86
SIZ1YDR409W SAK1P38990 1142 aa3.41□□□□□ -1.86
SIZ1YDR409W PSD1P39006 500 aa3.41□□□□□ -1.86
SIZ1YDR409W POP2P39008 433 aa3.41□□□□□ -1.86
SIZ1YDR409W ARB1P40024 610 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W LCP5P40079 357 aaPredicted RBP3.41□□□□□ -1.86
SIZ1YDR409W JEM1P40358 645 aa3.41□□□□□ -1.86
SIZ1YDR409W YJL068CP40363 299 aa3.41□□□□□ -1.86
SIZ1YDR409W TOS3P43637 560 aa3.41□□□□□ -1.86
SIZ1YDR409W BRO1P48582 844 aa3.41□□□□□ -1.86
SIZ1YDR409W MTC3P53077 123 aa3.41□□□□□ -1.86
SIZ1YDR409W SGF73P53165 657 aa3.41□□□□□ -1.86
SIZ1YDR409W RPN14P53196 417 aa3.41□□□□□ -1.86
SIZ1YDR409W ORM1P53224 222 aa3.41□□□□□ -1.86
SIZ1YDR409W COS6P53344 381 aa3.41□□□□□ -1.86
SIZ1YDR409W TEP1P53916 434 aa3.41□□□□□ -1.86
SIZ1YDR409W REX2P54964 269 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W UTP6Q02354 440 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W YPL107WQ02873 248 aa3.41□□□□□ -1.86
SIZ1YDR409W MFB1Q04922 465 aa3.41□□□□□ -1.86
SIZ1YDR409W TSR1Q07381 788 aaKnown RBP3.41□□□□□ -1.86
SIZ1YDR409W ENV7Q12003 364 aa3.41□□□□□ -1.86
SIZ1YDR409W GET4Q12125 312 aa3.41□□□□□ -1.86
SIZ1YDR409W TAF3Q12297 353 aa3.41□□□□□ -1.86
SIZ1YDR409W RKM4Q12504 494 aa3.41□□□□□ -1.86
SIZ1YDR409W SKS1Q12505 502 aa3.41□□□□□ -1.86
SIZ1YDR409W DBP5P20449 482 aaKnown RBP3.4□□□□□ -1.86
SIZ1YDR409W PGS1P25578 521 aa3.4□□□□□ -1.86
SIZ1YDR409W ADK2P26364 225 aa3.4□□□□□ -1.86
SIZ1YDR409W HXT4P32467 576 aa3.4□□□□□ -1.86
SIZ1YDR409W SSE1P32589 693 aaKnown RBP3.4□□□□□ -1.86
SIZ1YDR409W PIN4P34217 668 aaKnown RBP RIP-Chip data3.4□□□□□ -1.86not detected
SIZ1YDR409W CCZ1P38273 704 aa3.4□□□□□ -1.86
SIZ1YDR409W TOM71P38825 639 aaKnown RBP3.4□□□□□ -1.86
SIZ1YDR409W PIK1P39104 1066 aa3.4□□□□□ -1.86
SIZ1YDR409W ALG5P40350 334 aa3.4□□□□□ -1.86
SIZ1YDR409W CNN1P43618 361 aa3.4□□□□□ -1.86
SIZ1YDR409W YJL171CP46992 396 aa3.4□□□□□ -1.86
SIZ1YDR409W SKP1P52286 194 aa3.4□□□□□ -1.86
SIZ1YDR409W TEL2P53038 688 aa3.4□□□□□ -1.86
SIZ1YDR409W MCM6P53091 1017 aaKnown RBP3.4□□□□□ -1.86
SIZ1YDR409W SHR3Q02774 210 aa3.4□□□□□ -1.86
SIZ1YDR409W HAS1Q03532 505 aaKnown RBP3.4□□□□□ -1.86
SIZ1YDR409W YMR018WQ04364 514 aa3.4□□□□□ -1.86
SIZ1YDR409W KRE28Q04431 385 aa3.4□□□□□ -1.86
SIZ1YDR409W ADY4Q05955 493 aa3.4□□□□□ -1.86
SIZ1YDR409W SWA2Q06677 668 aa3.4□□□□□ -1.86
SIZ1YDR409W ISA1Q07821 250 aaPredicted RBP3.4□□□□□ -1.86
SIZ1YDR409W TGL5Q12043 749 aa3.4□□□□□ -1.86
SIZ1YDR409W GPR1Q12361 961 aa3.4□□□□□ -1.86
SIZ1YDR409W YLR462WO13556 202 aa3.4□□□□□ -1.87
SIZ1YDR409W PRT1P06103 763 aaKnown RBP3.4□□□□□ -1.87
SIZ1YDR409W ARG82P07250 355 aa3.4□□□□□ -1.87
SIZ1YDR409W YEL076C-AP0CX16 216 aa3.4□□□□□ -1.87
SIZ1YDR409W YLR464WP0CX17 216 aa3.4□□□□□ -1.87
SIZ1YDR409W VMA2P16140 517 aaKnown RBP3.4□□□□□ -1.87
SIZ1YDR409W HEM15P16622 393 aa3.4□□□□□ -1.87
SIZ1YDR409W PFK1P16861 987 aaKnown RBP3.4□□□□□ -1.87
SIZ1YDR409W RIT1P23796 513 aa3.4□□□□□ -1.87
SIZ1YDR409W RER1P25560 188 aa3.4□□□□□ -1.87
SIZ1YDR409W AST1P35183 429 aa3.4□□□□□ -1.87
SIZ1YDR409W UIP5P36137 443 aa3.4□□□□□ -1.87
SIZ1YDR409W YHL049CP38722 271 aa3.4□□□□□ -1.87
SIZ1YDR409W PNT1P38969 423 aa3.4□□□□□ -1.87
SIZ1YDR409W YEL076CP39971 216 aa3.4□□□□□ -1.87
SIZ1YDR409W YEL075CP39972 122 aa3.4□□□□□ -1.87
SIZ1YDR409W YER189WP40104 122 aa3.4□□□□□ -1.87
SIZ1YDR409W YIL161WP40449 235 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms