RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W MNL2Q12205 849 aa4.4□□□□□ -1.7
SSB1YDL229W NCA2Q12374 616 aa4.4□□□□□ -1.7
SSB1YDL229W RAD61Q99359 647 aa4.4□□□□□ -1.7
SSB1YDL229W DNF2Q12675 1612 aa4.4□□□□□ -1.71
SSB1YDL229W CHS1P08004 1131 aa4.39□□□□□ -1.71
SSB1YDL229W CDC24P11433 854 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W BIK1P11709 440 aa4.39□□□□□ -1.71
SSB1YDL229W POL3P15436 1097 aa4.39□□□□□ -1.71
SSB1YDL229W COX11P19516 300 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W PRP9P19736 530 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W RIT1P23796 513 aa4.39□□□□□ -1.71
SSB1YDL229W PYC2P32327 1180 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W RPD3P32561 433 aa4.39□□□□□ -1.71
SSB1YDL229W SCT1P32784 759 aa4.39□□□□□ -1.71
SSB1YDL229W ANR2P36090 516 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W MMS4P38257 691 aa4.39□□□□□ -1.71
SSB1YDL229W SUL1P38359 859 aa4.39□□□□□ -1.71
SSB1YDL229W YHL017WP38745 532 aa4.39□□□□□ -1.71
SSB1YDL229W NEM1P38757 446 aa4.39□□□□□ -1.71
SSB1YDL229W YDR089WP38966 869 aa4.39□□□□□ -1.71
SSB1YDL229W AIM2P39721 246 aa4.39□□□□□ -1.71
SSB1YDL229W BOL3P39724 118 aa4.39□□□□□ -1.71
SSB1YDL229W SPF1P39986 1215 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W YRB2P40517 327 aa4.39□□□□□ -1.71
SSB1YDL229W IDS2P46958 469 aa4.39□□□□□ -1.71
SSB1YDL229W TMA22P47089 198 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W MCM6P53091 1017 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W PGA2P53903 129 aa4.39□□□□□ -1.71
SSB1YDL229W SKI8Q02793 397 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W NOG1Q02892 647 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W RLI1Q03195 608 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W MRPS17Q03246 237 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W RUB1Q03919 77 aa4.39□□□□□ -1.71
SSB1YDL229W BUD22Q04347 519 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W CRR1Q05790 422 aa4.39□□□□□ -1.71
SSB1YDL229W ISR1Q06098 443 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W MRL1Q06815 381 aa4.39□□□□□ -1.71
SSB1YDL229W DIA2Q08496 732 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W DDC1Q08949 612 aa4.39□□□□□ -1.71
SSB1YDL229W TMA46Q12000 345 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W RIB2Q12362 591 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W KRE5P22023 1365 aa4.39□□□□□ -1.71
SSB1YDL229W BNR1P40450 1375 aa4.39□□□□□ -1.71
SSB1YDL229W YLR358CO13565 187 aa4.39□□□□□ -1.71
SSB1YDL229W RPP1AP05318 106 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W CHO2P05374 869 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W PDC1P06169 563 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W ERG12P07277 443 aa4.39□□□□□ -1.71
SSB1YDL229W CDC23P16522 626 aa4.39□□□□□ -1.71
SSB1YDL229W DAL81P21657 970 aa4.39□□□□□ -1.71
SSB1YDL229W RET1P22276 1149 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W CLB2P24869 491 aa4.39□□□□□ -1.71
SSB1YDL229W PRD1P25375 712 aa4.39□□□□□ -1.71
SSB1YDL229W TFC1P32367 649 aa4.39□□□□□ -1.71
SSB1YDL229W MEI5P32489 222 aa4.39□□□□□ -1.71
SSB1YDL229W GCD7P32502 381 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W SEC61P32915 480 aa4.39□□□□□ -1.71
SSB1YDL229W LRG1P35688 1017 aa4.39□□□□□ -1.71
SSB1YDL229W ELF1P36053 145 aa4.39□□□□□ -1.71
SSB1YDL229W PCS60P38137 543 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SSB1YDL229W FTH1P38310 465 aa4.39□□□□□ -1.71
SSB1YDL229W YBR238CP38330 731 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W SRP72P38688 640 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W IMD2P38697 523 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W RIM4P38741 713 aa4.39□□□□□ -1.71
SSB1YDL229W YAP3P38749 330 aa4.39□□□□□ -1.71
SSB1YDL229W ORC6P38826 435 aa4.39□□□□□ -1.71
SSB1YDL229W VPS45P38932 577 aa4.39□□□□□ -1.71
SSB1YDL229W XDJ1P39102 459 aa4.39□□□□□ -1.71
SSB1YDL229W STL1P39932 569 aa4.39□□□□□ -1.71
SSB1YDL229W BUD16P39988 312 aa4.39□□□□□ -1.71
SSB1YDL229W PCL6P40038 420 aa4.39□□□□□ -1.71
SSB1YDL229W SER3P40054 469 aa4.39□□□□□ -1.71
SSB1YDL229W CIN5P40917 295 aa4.39□□□□□ -1.71
SSB1YDL229W PAC11P40960 533 aa4.39□□□□□ -1.71
SSB1YDL229W RRN7P40992 514 aa4.39□□□□□ -1.71
SSB1YDL229W ARF3P40994 183 aaRIP-Chip data4.39□□□□□ -1.71not detected
SSB1YDL229W GPP1P41277 250 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W BPL1P48445 690 aaPredicted RBP4.39□□□□□ -1.71
SSB1YDL229W YGR237CP50089 785 aa4.39□□□□□ -1.71
SSB1YDL229W ASE1P50275 885 aa4.39□□□□□ -1.71
SSB1YDL229W YKE2P52553 114 aa4.39□□□□□ -1.71
SSB1YDL229W RMR1P53060 241 aa4.39□□□□□ -1.71
SSB1YDL229W MET13P53128 600 aa4.39□□□□□ -1.71
SSB1YDL229W YNR021WP53723 404 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W RNY1Q02933 434 aaKnown RBP4.39□□□□□ -1.71
SSB1YDL229W NHP10Q03435 203 aa4.39□□□□□ -1.71
SSB1YDL229W GPN3Q06543 272 aa4.39□□□□□ -1.71
SSB1YDL229W YDR056CQ12025 205 aa4.39□□□□□ -1.71
SSB1YDL229W APL4Q12028 832 aa4.39□□□□□ -1.71
SSB1YDL229W TGS1Q12052 315 aa4.39□□□□□ -1.71
SSB1YDL229W YOR019WQ99248 730 aa4.39□□□□□ -1.71
SSB1YDL229W UTP10P42945 1769 aaKnown RBP4.38□□□□□ -1.71
SSB1YDL229W SEM1O94742 89 aa4.38□□□□□ -1.71
SSB1YDL229W GCN4P03069 281 aa4.38□□□□□ -1.71
SSB1YDL229W DCD1P06773 312 aa4.38□□□□□ -1.71
SSB1YDL229W SEC63P14906 663 aa4.38□□□□□ -1.71
SSB1YDL229W PRP4P20053 465 aaKnown RBP4.38□□□□□ -1.71
SSB1YDL229W PRP2P20095 876 aaPredicted RBP4.38□□□□□ -1.71
SSB1YDL229W UTR1P21373 530 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms