RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 CASP8Q14790 479 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 PARP10Q53GL7 1025 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 AFAP1L1Q8TED9 768 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
SEMA3B-214ENST00000619119 FAXDC2Q96IV6 333 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 RHOXF2BP0C7M4 288 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 RHOXF2Q9BQY4 288 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 CD248Q9HCU0 757 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 HELLSQ9NRZ9 838 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 IDH1O75874 414 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 HSPD1P10809 573 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 ERFEQ4G0M1 354 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 CCDC102BQ68D86 513 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 CCDC12Q8WUD4 166 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 FTOQ9C0B1 505 aaKnown RBP eCLIP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 ANKRD36CQ5JPF3 1778 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 CTAGE5O15320 804 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 ZSCAN12O43309 604 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 RNF40O75150 1001 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 KARSQ15046 597 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 JMYQ8N9B5 988 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 ANKZF1Q9H8Y5 726 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 PPP2R2CQ9Y2T4 447 aa17.99■□□□□ 0.47
SEMA3B-214ENST00000619119 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 INPP5BP32019 993 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 RDXP35241 583 aaKnown RBP17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 HAND2P61296 217 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 NEDD9Q14511 834 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 USPL1Q5W0Q7 1092 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 CAPN7Q9Y6W3 813 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 AFF2P51816 1311 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 BIN1O00499 593 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 PUS7LQ9H0K6 701 aaKnown RBP17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 SH3BP1Q9Y3L3 701 aa17.98■□□□□ 0.47
SEMA3B-214ENST00000619119 NF2P35240 595 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 DPCR1Q3MIW9 517 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 AMIGO3Q86WK7 504 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 VEZTQ9HBM0 779 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 RFX7Q2KHR2 1363 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 EBAG9O00559 213 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 ACBD3Q9H3P7 528 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 IQSEC3Q9UPP2 1182 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 FRMD3A2A2Y4 597 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 MYO1FO00160 1098 aa17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 IGHMBP2P38935 993 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 PUM3Q15397 648 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-214ENST00000619119 C21orf2O43822 256 aa17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 MYH3P11055 1940 aa17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 WTIPA6NIX2 430 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 SLC9C2Q5TAH2 1124 aa17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 PRPF38AQ8NAV1 312 aaKnown RBP17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 TBC1D22AQ8WUA7 517 aa17.96■□□□□ 0.47
SEMA3B-214ENST00000619119 Q6ZUG5 572 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 PIH1D3Q9NQM4 214 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 VSNL1P62760 191 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 HNRNPLLQ8WVV9 542 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 LPIN2Q92539 896 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 CABS1Q96KC9 395 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 SDF4Q9BRK5 362 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 LRRIQ3A6PVS8 624 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 KRT32Q14532 448 aa17.95■□□□□ 0.46
SEMA3B-214ENST00000619119 H3BQV1 296 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 ATP1A3P13637 1013 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 FSIP1Q8NA03 581 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 IRX2Q9BZI1 471 aaPredicted RBP17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 BCAMP50895 628 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 FANCCQ00597 558 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 BRF1Q92994 677 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 KIFC2Q96AC6 838 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 EHD4Q9H223 541 aa17.94■□□□□ 0.46
SEMA3B-214ENST00000619119 KIF3CO14782 793 aa17.93■□□□□ 0.46
SEMA3B-214ENST00000619119 JAK2O60674 1132 aa17.93■□□□□ 0.46
SEMA3B-214ENST00000619119 SLC5A1P13866 664 aa17.93■□□□□ 0.46
SEMA3B-214ENST00000619119 SRGAP1Q7Z6B7 1085 aa17.93■□□□□ 0.46
SEMA3B-214ENST00000619119 SEPT12Q8IYM1 358 aa17.93■□□□□ 0.46
SEMA3B-214ENST00000619119 RIN2Q8WYP3 895 aaPredicted RBP17.93■□□□□ 0.46
SEMA3B-214ENST00000619119 DESI2Q9BSY9 194 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms